Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0054100 |
| Transcript ID | LotjaGi2g1v0054100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc-finger domain of monoamine-oxidase A repressor R1 protein; TAIR: AT5G38690.1 Zinc-finger domain of monoamine-oxidase A repressor R1 protein; Swiss-Prot: sp|Q96GN5|CDA7L_HUMAN Cell division cycle-associated 7-like protein; TrEMBL-Plants: tr|A0A072U7K4|A0A072U7K4_MEDTR Zinc-finger of monoamine-oxidase A repressor R1; Found in the gene: LotjaGi2g1v0054100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:10700552..10708465) extracted from Lotus japonicus Gifu genome v1.2.
CCCGACACGATCCATTGTCATCCCTACTCCTCTTAATAAACACACCCTGTTTCCCAAGTCCAAACAACACACATGTTTTC ATTTTGAAAATCACAGACACATCCTCGAGAGATCAAAAAATTCCAATTCCCCCCCATAAATCTCCAAAAACTTTTCATAT TCCTCTCCGTTCCCGCCACCCCTGCATCGGAGAGGGAAAATTGTTTTCATACAAATTTTCACGACCTGAGGCGCTCTTAT AAACTCACCAGAATCTAGGGCTTTTGTTCAAATCGAGTCATTCATTCATTCATTCCTCACCAGTACTATCTTCAACATGG AACCGGAACAGACCGAGCAACCTAGAGGAGGCGGTAACACTGGCGTGGGGATTCGAGTCGTTGGAAGCAGAATCTATGAT CCTGCAAATGGAAAATCTTGCCACCAAGTAATGAAACTTTTTCATTTTTTGACCCTTATTTTTGTATATGATTTTTCACA TTGGTTGTCAAAATTGGGGCTCAGTTTTTATTTGAGAAATGTGGTTAAAAAAATGAAATCTTACTTCTTTTCAGTTTTCA CTTAATTTTGTTGGGATTTATGAATGTTAATTTTTCTTTTCTCTGTATTTTTGGGATCTGGATTGTGGCTATTGCTGTTA AAATGCCAAATCTAGAAATGGGTACTTTTAAAGGGAAGGTGATGATGTTGTTTAAAATTTGTAGGGTGATGGTGTTTGTG GATGGATCTTTGAGTCAGTCTACTTTTGTTGTATTTTTTCTTTCAGTGCCGGCAAAAAACAAGGGATTTTACTGCTTCGT GTAAGAATACGAGAAATGGCAAGCCTTGCGTGATCAAATTTTGTCATACCTGCCTTTTGAACAGGTAATAATTGATTTGT GGTGTTGTAACTGTCTTGGAAATGCATGTGCTTTCTAATATATCATTTTTACAAGGTGGATATTAGCCACATTGCCTATA TTTGTGTTTTATCGTATCGGTTTTGTATATTCGTGGTTTATTTGTCATATGATTTTACTTTGTTAAGGGTACAAAAGTAG AGTGATGCATATTTGGATGTGTCTTTGGTGTTGAGGATTTTGTTTTGTTGAATTGAATTAGATATGGAGAGGATGCACAA CAGGTAGAATTGTTGGATGACTGGAGTTGCCCTAAGTGCCAAGGAAAATGCAACTGTAGCTTGTGCAGGTAAGTTGTATG TGAGTTTTGAGTTTAGCGTATTGGTTTCTATTTTGCTCCATTTGTGTGTTAACTTTGGAAGAAGAGTCATTTTGTAGGAA AAAACAAGGTCAGCAGCCTACCGGTAACTTAGCGCGTGAAGCCAAGGCTTTTGGTTTTAGGTCAGTATCAGAATATCTGG GCGCTCGGGCTGCCGCAAATTTGGACACAAACACAAGCAATGAGGCTGCTGTTTTGCCTCCAAAGGAGGTGTGTTGATTT TCTTTTCATTTAACTTCTCTTCTGTTAAGTGGTTGATCGAGTATATATTTATATTCTGGCTAATGAAGCTTCTCTTCCTG TGTGCATTGTGAAATATGAATTAATGATTATAGGAGCAAAGCTGTGTTGATAACTTGAATTAATTAATCGATGATTGTTT TATATTTTAATTTATTCATAGGTTGGTTTTACTGATATGTACATAGCCTTTTCACCCTATGATTTTGGTTGATGTTTCTG TTTGTTTTCTACTGCAGGAGGCTGCAGTGTCTCTACCAGCGGAACCTGGGAAGGAAAACTCTCAGAAAGTTGAGAAGACA TACCCCAAGAAAACTAAGAAAACCAAGCGAGAAGGGTTAAAAGAGATATCTAATGACACCAGTGCTGATGATGCTTGCCA AAACCAGGACCTGAAAAGGCCTAAAATTTGTAGTGAAGTTCCAGAGAAGGAAACAAAAAGAAGTATGAAGGATCACAGCT TAGTTCGCAAGGAAGTCTCTGTAAACAATGGTTATGTCATCAATCCTCATGAAAAAGTTCAGGTGGAAATTCCTTTGCTG CCTGGCACTCAAGTAAAAGAGATATTGGGCATTGAGTTCCCACATGAGGATGTTGGTAATGCATTGCAATTTTTGGAGTT CTGTAGAGTGTTTGGAAAGGTATGATTCTTCTCTTAAAATCTTTGCTTGGTTAATTGCAATTTACTGCTACATGTAGTAG TTAACACATTGAATAAAACTACAGGCATATTCTTTTAATGCTACAGGAAATCATGATACAAATTTGGGATAACTTGCTGT TTTTATTGATTTCATGTAACTTAGGAGTCAGATTTATCTTGTACTTGATCATTTAATTGAATGTTTGATTGGTGGGTGGA TACTTCTTAGTTCTACTAAGTCAATTCAAAATTCTGTAGATTTATTGGTGGTATTGTTGCAGAAATAATTCTTGTTTTAT ACTTCATGGGGCTGCATTCATTCTTATTTGCTCTATCATGTGGTCTGACTTTTCTTCCCTATGAAATCAGGCTCTTGACA TGAAGAAAGGGGAAGCTGAGGCTATTTTGCGAGAGCTAATTCGCAAACGAAATTTGCGCAGAGGAGAGAACACCGTAGCT GTTCAATTCCAAATTAGACTTTTGATCCTGATACTCATTGATTCAGGACACAAGTGAGTTGATCCAGTTTACCTTTTTTT TTATTCTTTTTTTTTGTTTGTTTTCTTTGTTTAAAGCTTGTTATCTGCATCACTTTGGTGTAGGTCTCCATCCTTAACCA CAACAGATGGGAAAAATTCATGGTTGAAAGCGCTGGGGGATTTAGCTTCACAATCTGCTCTTGTGCTTAAAGATTTCCCC TTAGAAATGCTTAATGAAGGGTACGGCAACTTGAGTTTGTCTCACAAGCTTAGCCTCCTGAATTTCATTTGTGATGAAGT TCTATGCACAGAGTAAGAATTTCAAACTCAAATAGAAAATACTTTTTTCTGTTTTTTTTCTTATCTTAATTCATCTTTTT TTTGTTACCTTCTGTTTGTTTTCAATTTCATCTTGTTTAAGTTGGTTGGAAAACTTGCTTAATATGTTCAGGAAAGTGAG GGGTTACATTGAAGATGAAAATTCAAAAATTGCTCAGGTCAAGAAAGAAGCCAAAGTTCAAGTTGAGGCTGCGAAGGAGA AGGTAATTACAAGAAACAAGGTGGTATGTTCTTTGTATATGGATTCGTGGGACTGTCTCATTGTGTTCATAAATGTGTTT ACATGTCACTTACAGGAAAAAAGCTTGAAACAAAAGTTGCAGGAAGAGATAGCCAAAACAGTTCAATCAAATGGGGATCC TGTGTCATTTTCAAAGAAAGATGCTCTTTTGCTGAAGTTAAGAACTGCAATAGCTCAAGCTCACAGTGAGATGCTTGAGG CTAAGGGAAAGACTCCTAAAAGTATGTTGTGATGTTTATGAGTTGCTTATATGCTCTAACTTTTATTCAATTTCATTGCT GAAGTTTTGCACGATCTTCTTATTTGAAGAGATTTATCTAATCTGCAAACAAGCAACAAATAGCACTAGAAAATGGAATT TGACTTTGTTCACGGCATCTGATATGCTTCATCGTATTGATGTTTTCTGAAGATGAATGACTAGTTTATTGTAAAAAATT TATAACTGGTGATGTTATCTATACTGCAATTTGATTTAGGAGAATATAGTAAATATACAGAATGGCCTAATCCTTTTGTC CTTGATTTGGTATGTGAGTAACTGTTTTGCCATTTTATTGCAGAAAACCTTCATTAGATTTAGTCATTTACATATGATGA TGCGTTCATTTCAAATTTTTTAGTTCCCTTACAGTTTGAGGTTTTCTAGGCTGAGATTTCTCTCTTTGATGAGTTGATAA CATACATGCAGTAATATTTTGATTGGATACTCAAAGAATGCCCGCTTGCTTCTGATTTATTTTACTGTCCGAGGCCCTTG GCATTAATTGCTCTAACCTTAGCATAGAATATTTCATTTTTTTTTCATTGTTGTTCCAAATGCAGAATATTGGTCATTGT TGATATGTGCGCTTGTCTGTGTTTTCAATATTTATTTCCTATTTATTGGTAGCTTAGATGGCTGGAAGAACAAAACATGT AATGGAGATGTGACTTTTACTTATTGTTGTGTTGTGAATAGGGATTTCAATTCATAGAAACTGTTTATAAGTAGCAGAAA ACATGTCCTTTTGATCCCAGTACATTTTAGAAGCGGGTTATGTTTTGCCACTGGGGGATTATGGTAGTGTGTGTTGTACT CACCTCCATGCTTGATGAAGGATTGAATGGAATTGTTAAAGAAAAGCAAAAAGCTCAATTCAGTGTATAGCAAAAAGCTC AATTCAGTGTATCACTTTTCACCCCCCCCCCCCCCCCCATATTAATAGTAATATACATATGTAGATATCTGGTGATTCAA ATTATCTTATGCGTATGCCTAAAACTCATTATTGAGCACATCTATAGTATAATAAAAAGAGAAAAGTTTCGCCCTGCTTC TTCTGCTCACTTACTTTTTATTCACTTGGAGGCATGAAGAGTATTAAATACTAGTAATTACTTTCCCTTGCTGGATGGTG TTGTTTACCCTCTAGAAGATGGAGAAGTCTTACAAGTAATAAAAACTTAATTATTGATCTGATAATGTTTGCATTATAGG CTGAGGCACATTAGAAGTTGATTAATTCTGTTCAAATAGAATAAGTTTTGTTGAGATATATTCTGACAGCTGGAATAGAA CTAGATAACAGACTTCTGATAGTTAACTGAAATAGAAACATTTTGCAGACTTTGGGTCATTAATTCAAAAGTGCACATAA TGTAGTTATACCCTCCTCCTCCTTTCAGAAATTAACACTATTCAAAGAATCAGAGTTTGTGTTTTTTTAAAGAGATCATG AACCACAGTTAGGGCAATTCTTCTGTAAGAACCAGCAATCTAAGCATCAACTAGGACATGAGTAACAACATAACTTGTAA ATGAATCAGAGTTGTAGACAGACTCTAGTAATTATTTGCATCATATACTATTGATCTTTAATGCTATTATTATTTCACAT CTTGTTTCTTTTTTTACATGATATTATGCACTCACTCAAAATGTATTGAAGTTTCCTAGTTTCTAAAAAAGAAATGTATG GTTTGACATAGGTCCTTGTGGTCTACGGAAAGTATTGTTAGATGACTGCCTGGAACCTCATAGTTCCATTCCACATTAAT GAAAAGTGCTGTCTTGTTGTAAAAAAAAATGTGATTGTCGCATGAAAATGTGTTTATATATGACTACTTCATGTCTCTTA AGAGATTAAGTTTTCTTCTAATGCAATGGTTATTTGTTTTTTAATATTGTAGTGAAAGGTTCTGATGCTGTGAGAACTGA GCCTGAGTTTGTGGATGGCAATGGTCAGGCATTTTGGAAATTACGGAGTTATGATGGAGAAGATGCTGTTTTGCTGCAAG GTAATTCTCATGAATTAGCTTAACTTTTGAATATGATACTATTATGATTTTGGCTCCAACAAGTTTTCTAAAGGATGGCA CGGCATGCAGATATCAAAATACAAGATGAGGATGGTACTGCAATTGAAGAAAGATGGTTTGTTTATGGTCCTGAGAAGAA GCATGAGATATATAAGTACATTTCCTCAAGGTGAGATCTTCTGTTTAATTCAAATTGGATTAGCCATTGAGCCGGCAGTG GATACCTTGGTCTCAAAAAAAGTGGATTGTACATACGAAATACTTTTGACCCTTGAAGAAAGCCCAAAATTGAAGATGGA AAGCTTCTGAGATTAAAACCTTTATAAGTGGTTTTGATTACACGGATAAGATACACAATTTTTCCCCATTTCATGCTTAA GATGACTTTATGTACAACTTGGCTTTTGATTATTATCATTTGCTAATTATTGTTATGCTATAATAGTCACTTATCTTTAT AAATTGATCATTAGCTATATATGTCATAAAATTATTCTTGATATGCAAGTTAGTCTTAAGAAACAAAAGTCCCCATTTTA GTCTTAAAAAGAAAAGCTTCCGGACATTGATTTTTTCCTATAAGAATAATAATTCTTGTCTTGGATGAAGGTTGGATAAA GGACACTCAAAAGCTCGTGTTTACTCATCAGAAGTTGAAATTATTCGTCCCCTTGTTTTTGCTGAAGTGAGTGCTCATTC CCTTTTGTTTTTCATTTGTTTCCTTTGGTTTCTTACTACTGTTGGTTATGAATTGTTCTTATTGCTTTAATTTTATTTTT TTCCAAATATTGAATGATATATGATATCTGAGAGATGATTTGTGATATGATGGTAGATGATTTATAACAAATAGGATGAT TTATTATGATATAATATTGAATCACAGAAGAAGTTTGACAGATGGCGTTGCCTTATGTGAGGGTGGCTAGCCTGAAAAAA AATAGATATCTATGACTTTTGCTTGGCTTCTCATCTTTTGCTATGTGTTATTAAATCAATTCAAGATTTTTGCTTATCAA ATAAAAATTAAATCAATTCAAGATAATTACTTAAGCTAAATAATAACTGACCTAATTTAAATTAAAACACCCCCTAACTG CTACTGCAGAGTGCAACTGCAACCGCAGGCACTGTTCACGCGCATGGTTCACACAGCCCCCTATCACTGGTCATAAAAAA TTAGATGCAACCTCATCAATGAGTAATGATTTAACAAAGCCTTTGAAAGGCTGCATGATCACAATAACATCTATCATACA AATAAATGTCACATATCAGCAGAAACGAATAACCATGAATAACTACTTGTCAATGGAAGCTAGAAGGCGAAGTTAGTTTT CTTTGAAGATGTAAAATCATTTCTACAAGTCCAAGATCTAATTGAAGAGTTAAAAAAGCATAACTTCTGCCCAACGAGTC ATATTGAAGATAAGTCACTATAAACATGGAACTAGTCTATTCTCCTATTCGGCAGTCTATAAGTTTATTTTATGAAGTTT TAAAATATAATGTACTGTTTCAGATTAGTAGCATGTATATTGCTTCTGTATTTATTTTCTTTTTTTCATATCAACCTTTT TTGTTTGTTCTTGAAGCAATTGATATTTGCATTTTGAAATGACAATAAAAAAACTTAAATTTGAGGCCAGAACTGATAAA AGTTATCTAGCTATTAGGCATATGATCAGAAGAAAATTGAAACCTCTAGCTGAAGTTGCTAATTACCTTTCCAGATGCGA ACAAATGATAACATTACAGGACAGAGAAGCATCTGTTTTGGCTATATCTGATCCTAGACGGATAATTCATTTATATAAAA ATTTCTTTCCTATACATAGCCATGTGTAATGTGAAATTCAGCTTGATGATGGTACACATTCCCAAGTTCTCACCCATAGT CTGGTATATCTATTTTCCAGGGTATTTGCTGATTTATGTATCCTACCTCTTTCCAGGTATTTCTATGTCATTTTAGTTGT TTTCAATGTTCCAACATAACCTTACTAATTGGTTGTTCTATATTTGCCTTTGTTCTTTTAGGATGGAAAAATGAAAACTG AGGTCAAGCTCACAGGAATGCAACCAACTGAAACTTTAAAATATTACAGTAATTTGATCTTGGACTAAATGTGCCTACCT CCAAAATGATTAATCTTAATATACTATGAGTAGATAAGCCCTTTTTGTAATGTTGATGGTTTATCATATATACACCATTA GCTTTTTAGATAATGAAGCACTCAGTCATTGTACCATGTTGTACAACTGTTGCCAACTGAAATTTTCATTTCATCCATTT GCACTTCCAACTCCGGACAATTTGCTATGATTGAGAATTGAGATATAGTTTCCGATTGTGTTCAACTAGCATTTTAGCAC GTGCAATGCACTTTAAAATATTACTTTTTTAAATAGTATATATTAGAGTATCATTTTTTAATTTTCTGATGTAC
CDS sequence (LotjaGi2g1v0054100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACCGGAACAGACCGAGCAACCTAGAGGAGGCGGTAACACTGGCGTGGGGATTCGAGTCGTTGGAAGCAGAATCTA TGATCCTGCAAATGGAAAATCTTGCCACCAATGCCGGCAAAAAACAAGGGATTTTACTGCTTCGTGTAAGAATACGAGAA ATGGCAAGCCTTGCGTGATCAAATTTTGTCATACCTGCCTTTTGAACAGATATGGAGAGGATGCACAACAGGTAGAATTG TTGGATGACTGGAGTTGCCCTAAGTGCCAAGGAAAATGCAACTGTAGCTTGTGCAGGAAAAAACAAGGTCAGCAGCCTAC CGGTAACTTAGCGCGTGAAGCCAAGGCTTTTGGTTTTAGGTCAGTATCAGAATATCTGGGCGCTCGGGCTGCCGCAAATT TGGACACAAACACAAGCAATGAGGCTGCTGTTTTGCCTCCAAAGGAGGAGGCTGCAGTGTCTCTACCAGCGGAACCTGGG AAGGAAAACTCTCAGAAAGTTGAGAAGACATACCCCAAGAAAACTAAGAAAACCAAGCGAGAAGGGTTAAAAGAGATATC TAATGACACCAGTGCTGATGATGCTTGCCAAAACCAGGACCTGAAAAGGCCTAAAATTTGTAGTGAAGTTCCAGAGAAGG AAACAAAAAGAAGTATGAAGGATCACAGCTTAGTTCGCAAGGAAGTCTCTGTAAACAATGGTTATGTCATCAATCCTCAT GAAAAAGTTCAGGTGGAAATTCCTTTGCTGCCTGGCACTCAAGTAAAAGAGATATTGGGCATTGAGTTCCCACATGAGGA TGTTGGTAATGCATTGCAATTTTTGGAGTTCTGTAGAGTGTTTGGAAAGGCTCTTGACATGAAGAAAGGGGAAGCTGAGG CTATTTTGCGAGAGCTAATTCGCAAACGAAATTTGCGCAGAGGAGAGAACACCGTAGCTGTTCAATTCCAAATTAGACTT TTGATCCTGATACTCATTGATTCAGGACACAAGTCTCCATCCTTAACCACAACAGATGGGAAAAATTCATGGTTGAAAGC GCTGGGGGATTTAGCTTCACAATCTGCTCTTGTGCTTAAAGATTTCCCCTTAGAAATGCTTAATGAAGGGTACGGCAACT TGAGTTTGTCTCACAAGCTTAGCCTCCTGAATTTCATTTGTGATGAAGTTCTATGCACAGAGAAAGTGAGGGGTTACATT GAAGATGAAAATTCAAAAATTGCTCAGGTCAAGAAAGAAGCCAAAGTTCAAGTTGAGGCTGCGAAGGAGAAGGAAAAAAG CTTGAAACAAAAGTTGCAGGAAGAGATAGCCAAAACAGTTCAATCAAATGGGGATCCTGTGTCATTTTCAAAGAAAGATG CTCTTTTGCTGAAGTTAAGAACTGCAATAGCTCAAGCTCACAGTGAGATGCTTGAGGCTAAGGGAAAGACTCCTAAAATG AAAGGTTCTGATGCTGTGAGAACTGAGCCTGAGTTTGTGGATGGCAATGGTCAGGCATTTTGGAAATTACGGAGTTATGA TGGAGAAGATGCTGTTTTGCTGCAAGATATCAAAATACAAGATGAGGATGGTACTGCAATTGAAGAAAGATGGTTTGTTT ATGGTCCTGAGAAGAAGCATGAGATATATAAGTACATTTCCTCAAGGTTGGATAAAGGACACTCAAAAGCTCGTGTTTAC TCATCAGAAGTTGAAATTATTCGTCCCCTTGTTTTTGCTGAAGGTATTTGCTGA
Protein sequence (LotjaGi2g1v0054100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEPEQTEQPRGGGNTGVGIRVVGSRIYDPANGKSCHQCRQKTRDFTASCKNTRNGKPCVIKFCHTCLLNRYGEDAQQVEL LDDWSCPKCQGKCNCSLCRKKQGQQPTGNLAREAKAFGFRSVSEYLGARAAANLDTNTSNEAAVLPPKEEAAVSLPAEPG KENSQKVEKTYPKKTKKTKREGLKEISNDTSADDACQNQDLKRPKICSEVPEKETKRSMKDHSLVRKEVSVNNGYVINPH EKVQVEIPLLPGTQVKEILGIEFPHEDVGNALQFLEFCRVFGKALDMKKGEAEAILRELIRKRNLRRGENTVAVQFQIRL LILILIDSGHKSPSLTTTDGKNSWLKALGDLASQSALVLKDFPLEMLNEGYGNLSLSHKLSLLNFICDEVLCTEKVRGYI EDENSKIAQVKKEAKVQVEAAKEKEKSLKQKLQEEIAKTVQSNGDPVSFSKKDALLLKLRTAIAQAHSEMLEAKGKTPKM KGSDAVRTEPEFVDGNGQAFWKLRSYDGEDAVLLQDIKIQDEDGTAIEERWFVYGPEKKHEIYKYISSRLDKGHSKARVY SSEVEIIRPLVFAEGIC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 18 | 559 | 542 | 3.3E-160 | – | |
| PANTHER | 18 | 559 | 542 | 3.3E-160 | ||
| Pfam | 27 | 126 | 100 | 1.3E-33 | ||
| MobiDBLite | 151 | 197 | 47 | - | – | |
| MobiDBLite | 162 | 188 | 27 | - | – | |
| SMART | 265 | 330 | 66 | 0.0064 | ||
| ProSiteProfiles | 265 | 330 | 66 | 9.288 | ||
| Pfam | 361 | 401 | 41 | 1.1E-8 | ||
| Coils | 404 | 442 | 39 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi2g1v0054100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…