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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0060200 |
| Transcript ID | LotjaGi2g1v0060200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-transporting ATPase; TAIR: AT3G22910.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; Swiss-Prot: sp|Q9LIK7|ACA13_ARATH Putative calcium-transporting ATPase 13, plasma membrane-type; TrEMBL-Plants: tr|I1N6I6|I1N6I6_SOYBN Calcium-transporting ATPase; Found in the gene: LotjaGi2g1v0060200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:12736455..12739445) extracted from Lotus japonicus Gifu genome v1.2.
ACTGCTTTTGTTACCATCTATTGTTCCCGTGCTCTTGTTTCACACTTCAATCTCAAGAAAAACAAACCAAAAATCTCACA TTCCTCATCTTTCACCGTGCTAGATTTGGATGGTCCACCACAAAATCACAACCATTCCTTTGCCATTGATCAAGCAACTC TTAGTGACATTGTGAAGGAGAAAAACTTGCACAACCTTCAAAAACATGGTGGGGTTGATGGGGTTGCTTCAGCTCTTGAA TCAAACATTGAGAGTGGTATCAATGGTGATGATGAAGGGGTTGCAATTGCACGTAGAAAACAAGTGTTTGGTTCCAACAC TTACAAGAAACCACCTTCCAAAAATTTCTTACATTTTATAGTGGAAGCATTTAAGGATGTTACCATTCTTATTCTCTTGG TTTGTGCTGCTCTCTCTCTTGGTTTTGGAATCAAGGAGCATGGTGCAAAAGAAGGTTGGTATGATGGAGGAAGCATTTTC CTTGCTGTGTTCATTGTCATTGCATTGTCTTCTGTTAGCAACTTCAGGCAGAGCAGGCAATTTGACAAATTGTCTCAGGT GAGCAGTGATATTCAGATTGACGTGGTGAGAAATGAGCGCAGAGAGAAGATCTCAATCTTTGAGATTGTGGTTGGTGATG TTGTTTGCTTGAAGATTGGTGATCAAGTTCCAGCTGATGGGGTTTTCATAGATGGGCATTCACTGAGAGTTGATGAGTCA AGCATGACTGGGGAGAGTGATCATGTGGAGATTGATGGAAACCACCCTTTCTTGTTGTCTGGAACAAAAATTGCTGATGG GTATGGTAAGATGCTTGTTACCTCAGTTGGAATGAATACTACATGGGGTCAAATGATGAGTTCGATTAGTCGCGATGTCG ACGAGCAAACCCCTTTGCAGGAGAGGCTGAACAAGCTCACATCATCTATTGGGAAGGTTGGTTTGGCTGTGGCTTTCTTA GTTCTTGTTGTTTTATTGGTTCGTTACTTCACAGGGAACACGGAGGATGAGAATGGGGTTAGAGAGTATAATGGAGGAGG AAGGAAGAGTAGTTTTGATGATATAATGAATGCAGTTGTGAGGATTGTTTCTGATGCAGTCACCATTGTTGTGGTTGCAA TCCCTGAGGGTCTTCCACTTGCTGTGACACTGACATTGGCTTATTCAATGAAGAAAATGATGGCTGATCAAGCAATGGTG AGGAAGCTCTCTGCTTGTGAGACAATGGGGTCTGCTACCACTATTTGCACTGACAAAACAGGCACACTCACCCTCAACCA GATGAAGGTGACCAAGTTTTGGCTTGGCCTAGAGCCAATTGAAGAGGGTGGTTTTACAACAGTTGCTCCATTTGTTCTTC AACTGATCCAAGAAGGTGTGGCTCTCAACACAACTGGTGGGGTGCACAAGTCTAAATCAGGTTCTGAGTTTGAGTTTTCA GGTAGTCCCACTGAGAAAGCAATTTTATCATGGGCTGTGTTTGAATTGAACATGGAGATGGAGTACTTGGTTAAAAGCTG TTCTGTCATTCATGTCGAGACCTTCAACTCAAAGAAGAAAAGAAGTGGGGTCTTGTTGAGGAGGAATAATGCAAACAACA ACAACACAGTTGATGCACATTGGAAAGGAGCAGCTGAGATGGTACTCAAAATGTGCTCAAGATACCATGATGCTTCCGGC ATTGTGAAAGATCTTGACAATGAGAGTCGACTGAAATTTGAGCAAATTATCCAAGCTATGGCAGCTAGTAGTCTTCGTTG TATCGCTTTTGCACACTCAGAGGTTGCAGAAGAAGAGATTAGAGATGAAGAAGGCGTCACAAGGGTGAAAGAAAATGGTC TAACCCTGTTAGGACTTGTTGGTATTAAAGATCCATGTCGTCCCGGGGTGAAGGAAGCTGTGGAGGCTTGCCAACATGCT GGTGTGAATGTGAAAATGATCACAGGTGACAATGTTTTCACAGCAAAAGCTATAGCCACGGAATGTGGAATACTTCATCC TAATCAGGACACAGATGGAGCAATTGTTGAAGGGGAAGAATTTCGCAACTACACACATGAAGAGAGATTGGAAAAAGTGG AGAAAATATGTGTCATGGCAAGATCCTCTCCCTTTGATAAGCTTCTAATGGTTCAATACCTTAAACAGAAAGGCCATGTG GTTGCTGTCACTGGGGATGGAACAAATGATGCACCAGCCCTCAAGGAAGCTGATATTGGACTTTCTATGGGGATCCAAGG CACTGAAGTTGCCAAAGAGAGCTCAGATATTGTCATATTGGATGACAATTTTGCTACTGTGGTCACAGTCTTGAGGTGGG GGAGATGTGTCTATAACAACATCCAGAAGTTTATTCAATTTCAGTTGACAGTGAATGCTGCTGCACTTGTGATCAATTTT GTGGCAGCAGTGTCAGCAGGGGAAGTGCCACTTACTGCAGTGCAATTGTTATGGGTGAACTTGATCATGGACACACTGGG TGCTTTGGCTCTTGCGACAGAGAAACCTACGAAGGAGTTAATGGAGAAATCACCAGTTGGTAGAACAAAACCTCTCATCA CTAACATCATGTGGAGGAATCTTGCAGCTCAAGCTTTGTACCAGATAGTTATTCTGCTGACTCTTCAGTTTAAAGGTGAG TCTATCTTTGGTGTGACATCAGGGGTGAATGACACATTGATCTTCAACACATTTGTTCTGTGCCAAGTGTTCAATGAGTT CAATGCAAGGAAGATGGAGGAGAAGAATGTTTTCAAAGGCATACTCAGGAGTAAGCTGTTTTTGGGGATTGTTGGTTTCA CAATAATCCTTCAGGTGGTGATGGTTGAGTTTCTCAAGAAGTTTGCAGATACTGAGAGGCTGAATTGGGGGCAATGGGGT CTTTGCATTGGTCTTGCTGCAGTTTCATGGCCAATTGGTTGGCTTGTGAAGTTGATACCTGTTCCTGATGAACCATTTCT CAATATTTTCAGAATTAGGAAGAAAAAATGA
CDS sequence (LotjaGi2g1v0060200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTGGGGAGAGTGATCATGTGGAGATTGATGGAAACCACCCTTTCTTGTTGTCTGGAACAAAAATTGCTGATGGGTA TGGTAAGATGCTTGTTACCTCAGTTGGAATGAATACTACATGGGGTCAAATGATGAGTTCGATTAGTCGCGATGTCGACG AGCAAACCCCTTTGCAGGAGAGGCTGAACAAGCTCACATCATCTATTGGGAAGGTTGGTTTGGCTGTGGCTTTCTTAGTT CTTGTTGTTTTATTGGTTCGTTACTTCACAGGGAACACGGAGGATGAGAATGGGGTTAGAGAGTATAATGGAGGAGGAAG GAAGAGTAGTTTTGATGATATAATGAATGCAGTTGTGAGGATTGTTTCTGATGCAGTCACCATTGTTGTGGTTGCAATCC CTGAGGGTCTTCCACTTGCTGTGACACTGACATTGGCTTATTCAATGAAGAAAATGATGGCTGATCAAGCAATGGTGAGG AAGCTCTCTGCTTGTGAGACAATGGGGTCTGCTACCACTATTTGCACTGACAAAACAGGCACACTCACCCTCAACCAGAT GAAGGTGACCAAGTTTTGGCTTGGCCTAGAGCCAATTGAAGAGGGTGGTTTTACAACAGTTGCTCCATTTGTTCTTCAAC TGATCCAAGAAGGTGTGGCTCTCAACACAACTGGTGGGGTGCACAAGTCTAAATCAGGTTCTGAGTTTGAGTTTTCAGGT AGTCCCACTGAGAAAGCAATTTTATCATGGGCTGTGTTTGAATTGAACATGGAGATGGAGTACTTGGTTAAAAGCTGTTC TGTCATTCATGTCGAGACCTTCAACTCAAAGAAGAAAAGAAGTGGGGTCTTGTTGAGGAGGAATAATGCAAACAACAACA ACACAGTTGATGCACATTGGAAAGGAGCAGCTGAGATGGTACTCAAAATGTGCTCAAGATACCATGATGCTTCCGGCATT GTGAAAGATCTTGACAATGAGAGTCGACTGAAATTTGAGCAAATTATCCAAGCTATGGCAGCTAGTAGTCTTCGTTGTAT CGCTTTTGCACACTCAGAGGTTGCAGAAGAAGAGATTAGAGATGAAGAAGGCGTCACAAGGGTGAAAGAAAATGGTCTAA CCCTGTTAGGACTTGTTGGTATTAAAGATCCATGTCGTCCCGGGGTGAAGGAAGCTGTGGAGGCTTGCCAACATGCTGGT GTGAATGTGAAAATGATCACAGGTGACAATGTTTTCACAGCAAAAGCTATAGCCACGGAATGTGGAATACTTCATCCTAA TCAGGACACAGATGGAGCAATTGTTGAAGGGGAAGAATTTCGCAACTACACACATGAAGAGAGATTGGAAAAAGTGGAGA AAATATGTGTCATGGCAAGATCCTCTCCCTTTGATAAGCTTCTAATGGTTCAATACCTTAAACAGAAAGGCCATGTGGTT GCTGTCACTGGGGATGGAACAAATGATGCACCAGCCCTCAAGGAAGCTGATATTGGACTTTCTATGGGGATCCAAGGCAC TGAAGTTGCCAAAGAGAGCTCAGATATTGTCATATTGGATGACAATTTTGCTACTGTGGTCACAGTCTTGAGGTGGGGGA GATGTGTCTATAACAACATCCAGAAGTTTATTCAATTTCAGTTGACAGTGAATGCTGCTGCACTTGTGATCAATTTTGTG GCAGCAGTGTCAGCAGGGGAAGTGCCACTTACTGCAGTGCAATTGTTATGGGTGAACTTGATCATGGACACACTGGGTGC TTTGGCTCTTGCGACAGAGAAACCTACGAAGGAGTTAATGGAGAAATCACCAGTTGGTAGAACAAAACCTCTCATCACTA ACATCATGTGGAGGAATCTTGCAGCTCAAGCTTTGTACCAGATAGTTATTCTGCTGACTCTTCAGTTTAAAGGTGAGTCT ATCTTTGGTGTGACATCAGGGGTGAATGACACATTGATCTTCAACACATTTGTTCTGTGCCAAGTGTTCAATGAGTTCAA TGCAAGGAAGATGGAGGAGAAGAATGTTTTCAAAGGCATACTCAGGAGTAAGCTGTTTTTGGGGATTGTTGGTTTCACAA TAATCCTTCAGGTGGTGATGGTTGAGTTTCTCAAGAAGTTTGCAGATACTGAGAGGCTGAATTGGGGGCAATGGGGTCTT TGCATTGGTCTTGCTGCAGTTTCATGGCCAATTGGTTGGCTTGTGAAGTTGATACCTGTTCCTGATGAACCATTTCTCAA TATTTTCAGAATTAGGAAGAAAAAATGA
Protein sequence (LotjaGi2g1v0060200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTGESDHVEIDGNHPFLLSGTKIADGYGKMLVTSVGMNTTWGQMMSSISRDVDEQTPLQERLNKLTSSIGKVGLAVAFLV LVVLLVRYFTGNTEDENGVREYNGGGRKSSFDDIMNAVVRIVSDAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVR KLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGLEPIEEGGFTTVAPFVLQLIQEGVALNTTGGVHKSKSGSEFEFSG SPTEKAILSWAVFELNMEMEYLVKSCSVIHVETFNSKKKRSGVLLRRNNANNNNTVDAHWKGAAEMVLKMCSRYHDASGI VKDLDNESRLKFEQIIQAMAASSLRCIAFAHSEVAEEEIRDEEGVTRVKENGLTLLGLVGIKDPCRPGVKEAVEACQHAG VNVKMITGDNVFTAKAIATECGILHPNQDTDGAIVEGEEFRNYTHEERLEKVEKICVMARSSPFDKLLMVQYLKQKGHVV AVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFATVVTVLRWGRCVYNNIQKFIQFQLTVNAAALVINFV AAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTKELMEKSPVGRTKPLITNIMWRNLAAQALYQIVILLTLQFKGES IFGVTSGVNDTLIFNTFVLCQVFNEFNARKMEEKNVFKGILRSKLFLGIVGFTIILQVVMVEFLKKFADTERLNWGQWGL CIGLAAVSWPIGWLVKLIPVPDEPFLNIFRIRKKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 748 | 748 | 0.0 | – | |
| SUPERFAMILY | 1 | 47 | 47 | 3.14E-6 | ||
| TIGRFAM | 1 | 740 | 740 | 2.9E-239 | ||
| PANTHER | 1 | 748 | 748 | 0.0 | – | |
| Phobius | 1 | 68 | 68 | - | – | |
| Pfam | 2 | 153 | 152 | 1.4E-22 | – | |
| Gene3D | 11 | 53 | 43 | 1.8E-171 | – | |
| SUPERFAMILY | 49 | 740 | 692 | 4.32E-90 | ||
| Gene3D | 54 | 737 | 684 | 1.8E-171 | – | |
| Phobius | 69 | 89 | 21 | - | – | |
| TMHMM | 69 | 91 | 23 | - | – | |
| Phobius | 90 | 124 | 35 | - | – | |
| TIGRFAM | 118 | 196 | 79 | 1.5E-20 | ||
| Phobius | 125 | 148 | 24 | - | – | |
| TMHMM | 125 | 147 | 23 | - | – | |
| Phobius | 149 | 547 | 399 | - | – | |
| SFLD | 157 | 536 | 380 | 0.0 | – | |
| SFLD | 157 | 536 | 380 | 0.0 | – | |
| Pfam | 172 | 497 | 326 | 2.6E-19 | – | |
| Gene3D | 173 | 521 | 349 | 1.8E-171 | ||
| SUPERFAMILY | 173 | 588 | 416 | 1.18E-59 | ||
| PRINTS | 175 | 189 | 15 | 4.0E-31 | – | |
| ProSitePatterns | 177 | 183 | 7 | - | ||
| SUPERFAMILY | 182 | 381 | 200 | 8.83E-33 | ||
| Gene3D | 185 | 384 | 200 | 1.8E-171 | ||
| PRINTS | 332 | 350 | 19 | 1.3E-12 | ||
| PRINTS | 377 | 388 | 12 | 4.0E-31 | – | |
| PRINTS | 399 | 409 | 11 | 4.0E-31 | – | |
| TIGRFAM | 455 | 564 | 110 | 1.4E-33 | ||
| PRINTS | 483 | 499 | 17 | 1.3E-12 | ||
| PRINTS | 483 | 502 | 20 | 4.0E-31 | – | |
| PRINTS | 507 | 519 | 13 | 4.0E-31 | – | |
| PRINTS | 515 | 540 | 26 | 1.3E-12 | ||
| TMHMM | 543 | 565 | 23 | - | – | |
| Phobius | 548 | 566 | 19 | - | – | |
| Phobius | 567 | 571 | 5 | - | – | |
| Pfam | 568 | 738 | 171 | 1.8E-46 | ||
| TMHMM | 570 | 592 | 23 | - | – | |
| Phobius | 572 | 591 | 20 | - | – | |
| Phobius | 592 | 610 | 19 | - | – | |
| Phobius | 611 | 634 | 24 | - | – | |
| Phobius | 635 | 639 | 5 | - | – | |
| Phobius | 640 | 664 | 25 | - | – | |
| Phobius | 665 | 684 | 20 | - | – | |
| TMHMM | 679 | 701 | 23 | - | – | |
| Phobius | 685 | 703 | 19 | - | – | |
| Phobius | 704 | 714 | 11 | - | – | |
| Phobius | 715 | 735 | 21 | - | – | |
| TMHMM | 716 | 738 | 23 | - | – | |
| Phobius | 736 | 755 | 20 | - | – | |
| Coils | 751 | 755 | 5 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Calcium-transporting ATPase activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Calcium ion transmembrane transport | A process in which a calcium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. |
Expression pattern of LotjaGi2g1v0060200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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