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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0146500 |
| Transcript ID | LotjaGi2g1v0146500.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein, putative; TAIR: AT5G07270.1 hypothetical protein; Swiss-Prot: sp|Q4FE45|XB33_ARATH E3 ubiquitin-protein ligase XBAT33; TrEMBL-Plants: tr|G7ZV34|G7ZV34_MEDTR E3 ubiquitin-protein ligase XBOS32; Found in the gene: LotjaGi2g1v0146500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:52724204..52731073) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGAAATTCATTTGGGTGCTCAGCTTCCGGCGAGAGGCTGGTGTCGGCGGCGAGGGACGGCGATTTGGTGGAGGCCAA GATGCTTTTGGAATGCAACCCTGGTCTTGCCAAGTACTCAACCTTTGGTGGCCTCAATTCCCCTCTTCATTTTGCAGCTT CCAAGGGCCATAACGAGGTTTCTCATCTACCCTTTTTCAGTTTTGCCCTTTAATGTTTCAAAGTTTGTGTTTTTGCCATT TTCATCAACACCCTTTTCTCAATGTTTCATTTTTTCAAATTAGATTGTGGCGCTGTTACTTGAGAATGGAGCTGATGTGA ATTCAAGAAATTATTGTGGGCAGGTAGGTACAGTTTTCATTTTGGTGTTTATTTTTAAACATATATCAGGTTGATTGATT TAAGTTTTATGGATATTGTTTTTGATTTGTCGAATTTGCTTGATATTGTTGCAATTGGTGTTGTTGGAAGATTCCATCCT GTGTTAGAAATTGCAAATTGAGTTTTCCCATTTTGGTTCAGCTACCTACCTAGTTTTGAAGTATGATCCTATTCCATGTT GTGTAGTATGATTATTGACAGATCAGTGGATCCGGTGCCTATTCAATAGATGATATATCTAGTGCTTTCCTTTTCGATTC ACTTATATGGTGCACTGACTAAGAATATGGTTTGCTAAATGATGATTTTTGGTTACTGTGATCCTTGATTTGTAGACGGC TTTGATGCAAGCTTGCAGATATGGTCATTGGGAAGTTGTACAGACCCTTCTGCTCTTTAGATGCAATGTGAGTACGGTTA TAACTGATGCTGAACTGTCTTTCTCTATTACATAGTGTTTACTGTCCTATAGTGAGTTAGAGACCACAGGTCACAGGCCT GGTACTTGAAACTATGTGCTGGGTGGGAATTGGATTGTTGGTCTTCTTCTAGTGTATTTTCCTATTACATGGTTAAAGTT TCTTTTCAACAATAACTAGACCCTATTCAATTTAATAACAGGTTATGAAAGCAGATTATCTCAGCGGAAGGACAGCTCTT CATTTTGCAGCTGTCAATGGGCATGTAAGATGCATTAGACTTGTTGTGGCTGACTTTGTTCCAAGTGCGCCTTTTGAAGC TTTACACTCTCGCACGGATCCTAACATGAGCAGACATGAGCATGGGTGCGCCTTTCCTTTTCATTATATAATTCCCAAAC AATGTATTATTGTAAATTTCATGTATTTTTACTTTTATTTGATAATGTTGAATGACTAATATACTTTCGCCATCTGTTAC GTGCTTATATTATAATGTTTTTTGTATTTATTTCATCATGTATTTAGTATTTCATAGACTCACTTTATTTTTTCTGCATT TTCATAAACATACAGTTGTGATTTTTATTACTAAATTCATGGTTAATTTTTTGTGGGTAGTAGGACTGATAGGAGTTAGG CCTCTTAAGAAGAGGTTGTTATTGTAAGTAACTAGCCAATAGTTGTTATGGTTAGCTAGTTAATGAGTTAGATAGACTGT TACAGTGAGGAGATATTATAAATAAGAGGGAGAGAGAAATAGGAGGGTATCAAAATTGTAATCAGGGAAATTAGGGAGAG CCCTGGTCTCTCAAATAGCAGGGAATTGGTGTATCTCTTGTTGTTCATTGCTGGTACCTATCAATGACAATAAATTTCAT TCAGTTTTTTTTTGTATTTTTTTTATATTAAGAATATTTAAGGCCTGACTGTACAATGATGTGTAATTTCTATATGTTAT ATTCTTGCTATTTATTTACTTTATTCCAGTGCAGTGCCCTGTCCAAGTTTGTAAATAAAACAGCTGATGCTGGTATTACT GCTCTTCATATGGCTGCACTAAATGGGTATTTTGATTGCGTACAACTCCTACTTGATCTTAATGCAAATGTGTCAGCTGC AACATATCATTATGGAACTTCGATGGATTTAATAGGTTATTATTTTGTTTAATATGCTACTACATCTATGGTTTTCTCTT TGCCCCTTGAAAATTACTGATAAGCATCAGTGCATGTAGGGGCTGGAAGCACTCCATTGCACTATGCTGCTTGTGGGGGG AATTTGAAATGCTGTCAGGCAAGAATTTCCTTAACTTTGAATCTTTGATGTGTGATAAATGATAATCCATCTGGTCAGCT GGTCTATTTCTTTGAATCTGTCAATGATGGTCATATTTTTCCAGATCCTCCTTTCAAGAGGTGCGAGTCGGATGGCTTTG AATTGCAATGGGTAAGATATTGTAAAATGGAAATTCTGGTGCTAAGTTTTGCTTGCCCCATAACATGAATTATACAAATT TGAATTTTCCCCCAGGTGGCTTTCACTTGATGTTGCTAGGATGTGGGGGCGTCATTGGCTTGAACCGTTGCTGTCACCCA CTTCTGATGTCATAATATCATCATTCCCTGCTTCAAATTATTTGTCCTTGCCTCTCATGAGTGTGCTCAACATAGCCAGG TATTTTTACAGTAAATATATCTTGATAATGAAAATGACAAAAGTAAAGGGAACAGTTGTGGAACTGGAAATAGTCTAGGG ACCAAAATTAGCATACAATAATGATAACAGCAAAATCTTCTCCTACTAGGTGAAGTCTAAAACATGGATCACATGATGCT ATAATACCTTGTCTAAGTTAAAAGATAGACCATTTACCTCAAATATCTCTTAATGATTTTGCCTTAAGTTTTCCTTGGTC TCACTATGTCTTTAATTATTTGATAATTCTCCGTCTCCTCCATCTAGTCAACTCTTCCTATGGATGCCTCTATGCTGATG CGACTGTATTGAGAATTAGTGGTTAGTTCAGTTGAATTAGTGGGTTAGTTCAGTTAGGAGTTAGTTGAGTTTGGCGGGAT TGGCTATATAAGCCATTGTGTGACCCTATAGTTGTAATGTTGAATGTTATGAGTTCTCTCTTCCCCTGTTTCTCTCTTCT CTCTCTCTATATCCTCTTCTCCCCCTTTCTCTCTTATTCCTATATCTGATCCTATCATATGCTCTTCTCCACATATGCCC AAAGTCCAAACCACCTAAGGTGAGACTCTACTGCATATGCCCAAAAAACCTATAGAGGCTATCTCAACTTTCACTCAAAT GATTGTGTTTGTATTCCTAATTCTATCTAATCTCTTGTAACTACTCATCATTCATCACTAAGTTTAACTTCTTGTTGGCT CTTAAACACTCGACATTGGTGTTATACAACATTGCAAATCTCATTATAGCTATGTGTAAAATTTTCCTATAGCTTGAGTG ATACTTTCTATTGCAGGTCACGCTTGAATCTTGATCCATTTCATCCACATTGCTTGAATCTCATTATTGATATTTCCCTT TATCTCCCTGTCATTATGTATGTTAGACCAAAGTACTTAAAAATGTGAGATTTGTGGTATTCTCTTATTTTTACCTCTAC TCTTATGATTTGGTTGTCTCATGCTAAACTTGCATTCCATATACTCTATTTTACTTTTATTCAGACAAAAGCCATGTGTT TTCAAGGCTTGTCTTCATATCTCTAACTTCTATTTATTTTCTCCCCTCTCAAACTAAGACTACATTGTTTGGAAAAAGCA TGTACCATGCCACCATCTCTTAGCCTTATATCATAATCATGTCTAGAACCAAGATAAAAAGATAAGGGCTCAGTGTTGAC CCTTGTTGCACACCTAGTTACAAGAAAATATTTTGTATTCTCACCTTACATTCTCCCACTAGTCATTGCTCCTCATACAT GTCTTTGATTGCTTGAACATAAGCAATCAACCTCGTTTCTTTATAGTCTTCGAAAAAAAATTGTTGAGTGCTTAATCGTG TCTTTTTCAATTCAATAGGTGTAGGTCTATTTGATTCCTCCAATGTCTCTCCATCAGTCTTCACAGAAAATATATGGCTT CCGGGGTGGGTCTCCCTGATATATAAAACCAAATTGATTTTTATAATATGGGACAACCGTCTTAATCTATGCTCAATGAC TCTCCCAACCCTCTATAATTTACAGACATTTATATGTTAGTTTTGTTATTGAAGATAGAGATTAAGTTAAACAGCAAAAT AATTATGGGAATATAGGGTGCTCTACACCCTCTGTTAATAAATAAAAGGAAGGAAAATGGTAAGGATGCCTGAAATTGCG AACCATCAGTGTGGAAACTTAATTTTCTCCTTACAAGAAAGACTCAATAATGGACCTTGTCCAATTTCCAGATATGCAAA ATGGATGTTATTACTTCAGACTTTTACTATTTGTCCTTCATGATAAATAAATATCTACATTAATTCTTCTGATTAGTGCA TGTCTAATGTGATGTCAACAAGTAACTGTTGCAAATTGGGAGGTCCTTTAGATTCTTGGCTTATTAAAAATATCAAACAA GTGGTCACTAGAATGATTAATGTTGCTGTGTATCTGATGAAGTATTTTATGATGTAAAATACCCTAAGAATTAAAATTGA TTCTCCTTTCCACTCAAAATCAACTGGGTATTTAGTTTTTGACCTGTGGCGTAAGTGGTATTCTTCTCGATTCACATTGC CTACTTGGGTCCCGTCATTCTTTGGATTCGGATGCCGACTATTCTGGATTCGGGACTTAGTCATAAGGCTCTTCATCCCT CCACCGAGTGATCAGATTCGAGAGCTCTTCCCACACACTCAGCCTAGGTTGCTAACTACCCCTCGTGGGTAAATCCTTTT TATTTTAGTTGTGCATAAATAGAAAATCACTCTAATTTGGTTGGTCTTGAGTGGGTTCTAGTTTTAATTTTTTGGAATGT CATTTTTGTCTCATTATTTCAGTCATTGAACCTCAGTAATCACTCTAAAGTAAATTGATTATCCCTCACCTTGCTTTATC ATATGATATACTATAACTTTGTAGATGACTTTTAATTTGAAATCAAAATATGTTCTTTTTTGGTACTTATTTCTTTTAAT GGCATCTATTATCCAAAAAGTTTTAATATTTTAAGGTTGGTGTTTCTTGCTTGTCAATTCCTGTGTTCTGTGTCATCCCA TGCTTTCCATCTCAAATTTTGTCCGCAAAACAGTAAAATAATAGAATAGGCTTTCCTTTCTTCTATATTTCCATGATGAT CTAATGGTAGTAATAATAACTATTAGGACCATTATCCTTTCTGATCCATTCCTGAGGATTCTCACTTCTTTTAATCTAAG GTTCCAGCTATGTTAATCTATCACATTATGACACATTTTGGCTGTGAATTGGAAAACAGTTGCACAGCTCTTATGATCTG ATTATTCAAGTACTTACTGAAGTGAATGTATGAAGATCTGCATCTTTGCTTTTCTATTGTCTATAATACAAGTTATCTTA TTAAATGGTGATTGACTAGAGCTGAGAACAGGGATTAGTCATTTTTGTGCTATATGTAGGCTGAGACATATGCAGACAAT GCGCTTTCCACAAGTTATTCATGATATAGGGCCAGTGAGAAAAACTATATGCAATATGGACTATTTCTTTTAGATTAGGA GCACGGCCAAAATGATCCCACTGTGGGCCCTCCCCTTGTTTTGATTAGAATGAAATGTTCCTATCATATGACTCTTAAGA TATGTAATACTACCAAAATAGTGAAGTTCTCACTTACCAATACACTGAAAAAGGAGAAAGAGAATTTCGTTGTTTTGGTT GTTTTCCATTTCCTTATGTACCTAGCTAGAGTTAAGATTTGATATCTTTTGTTTACTCCTAACACAAATATAATTAAAGA TTGATTTGAATAATTGCAGAGAGTGTGGATTGCAATCATCTACAACCTCCTCTAATGAGATTGACTTTTGTGCTGTCTGT CTGGAGAGGCCATGTTCTGTGGCTGCAGAAGGTACTGGATTCTATCTTTTGAATTTTGGTTAATGTTCGCCTGCCTGTCT GCATGAGGATATCTAATGAACCACAATTGCTTTCTGAATTAATGAAGCAAAGCAATATGTGATTTCTTGAGCCAAGAAAA TCAGTTATATGTAGTCATTTCCTTAGTTAAATAATCCCAAGATTTCAGAAAGGGTGGAGGTTGTCCCTTTCTCATTCTCT TTGACACTATATTTGCAACTTTTGATTTTTATGAGAACTGAAATCAATACATACTAAGTGTTTTTAGGGATACTAGTTGA GTGCAACGTGAACCGACTCTTATCCCAATCCACAAGAAGAGTTCTGTCACTTTTTGTCTCGAAGTGAATGCTAACATCCG TTTGCACCGGTGCCAACGAGTATCCAAACGTAGTATACTTTGTGGATGCTTTTTTTTTATGTTTACTGTAATTGATCTAA AAGAAATTTACATGCAGGATGTGGGCACGAGCTTTGTGTAAGATGTGCGCTCTATCTTTGCTCAACAGCCAATGTTTCTT CAGAAATGCAGGGCCCTCCCGGCTCTATCCCTTGTCCCCTTTGTAGGCATGGAATAATCTCTTTTGTCAAGTTACCAGGT TCCCAAGCAAAAGAAAATAAGTTACATGCGTCTCTCAGCCTGTGCACCCCATGCATACAACATCCACGACGCGACCTAGA TCCACAATCTCATACACCAGAGATTCGAAGAAACCGTGTAGCTTCTGTTTCTTCTGAGATGCTTTGCCCTGTCACCTGTA CTCCATTTCCATCTGTAGCAATTCCTCTATGCACCTGCAATGATGGTCCTTGTCCGTCGTGCGAACCCCGAGACATAGAA ACACAAGACGAGTCGCCTCGTCATTCGCAAGAAACAGATCAGGACAAAATGGAAGGGACAAGGCTGGGGAAAACAACTTG TTCAAACATGTTTTGGGGTAGAAGAAGTTGCAGCAGGGAGCACCAGTGCAATTCAGAAATAAATGCCTGA
CDS sequence (LotjaGi2g1v0146500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCACTAAATGGGTATTTTGATTGCGTACAACTCCTACTTGATCTTAATGCAAATGTGTCAGCTGCAACATATCA TTATGGAACTTCGATGGATTTAATAGGGGCTGGAAGCACTCCATTGCACTATGCTGCTTGTGGGGGGAATTTGAAATGCT GTCAGATCCTCCTTTCAAGAGGTGCGAGTCGGATGGCTTTGAATTGCAATGGGTGGCTTTCACTTGATGTTGCTAGGATG TGGGGGCGTCATTGGCTTGAACCGTTGCTGTCACCCACTTCTGATGTCATAATATCATCATTCCCTGCTTCAAATTATTT GTCCTTGCCTCTCATGAGTGTGCTCAACATAGCCAGAGAGTGTGGATTGCAATCATCTACAACCTCCTCTAATGAGATTG ACTTTTGTGCTGTCTGTCTGGAGAGGCCATGTTCTGTGGCTGCAGAAGGATGTGGGCACGAGCTTTGTGTAAGATGTGCG CTCTATCTTTGCTCAACAGCCAATGTTTCTTCAGAAATGCAGGGCCCTCCCGGCTCTATCCCTTGTCCCCTTTGTAGGCA TGGAATAATCTCTTTTGTCAAGTTACCAGGTTCCCAAGCAAAAGAAAATAAGTTACATGCGTCTCTCAGCCTGTGCACCC CATGCATACAACATCCACGACGCGACCTAGATCCACAATCTCATACACCAGAGATTCGAAGAAACCGTGTAGCTTCTGTT TCTTCTGAGATGCTTTGCCCTGTCACCTGTACTCCATTTCCATCTGTAGCAATTCCTCTATGCACCTGCAATGATGGTCC TTGTCCGTCGTGCGAACCCCGAGACATAGAAACACAAGACGAGTCGCCTCGTCATTCGCAAGAAACAGATCAGGACAAAA TGGAAGGGACAAGGCTGGGGAAAACAACTTGTTCAAACATGTTTTGGGGTAGAAGAAGTTGCAGCAGGGAGCACCAGTGC AATTCAGAAATAAATGCCTGA
Protein sequence (LotjaGi2g1v0146500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAALNGYFDCVQLLLDLNANVSAATYHYGTSMDLIGAGSTPLHYAACGGNLKCCQILLSRGASRMALNCNGWLSLDVARM WGRHWLEPLLSPTSDVIISSFPASNYLSLPLMSVLNIARECGLQSSTTSSNEIDFCAVCLERPCSVAAEGCGHELCVRCA LYLCSTANVSSEMQGPPGSIPCPLCRHGIISFVKLPGSQAKENKLHASLSLCTPCIQHPRRDLDPQSHTPEIRRNRVASV SSEMLCPVTCTPFPSVAIPLCTCNDGPCPSCEPRDIETQDESPRHSQETDQDKMEGTRLGKTTCSNMFWGRRSCSREHQC NSEINA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 326 | 326 | 3.3E-181 | – | |
| Gene3D | 1 | 96 | 96 | 3.4E-17 | ||
| ProSiteProfiles | 1 | 78 | 78 | 15.539 | ||
| SMART | 1 | 23 | 23 | 2700.0 | ||
| PANTHER | 1 | 326 | 326 | 3.3E-181 | – | |
| SUPERFAMILY | 2 | 90 | 89 | 2.34E-16 | ||
| Pfam | 2 | 83 | 82 | 1.1E-9 | ||
| SMART | 37 | 66 | 30 | 2.2E-4 | ||
| ProSiteProfiles | 37 | 69 | 33 | 11.114 | ||
| Gene3D | 119 | 205 | 87 | 2.5E-7 | ||
| SUPERFAMILY | 135 | 192 | 58 | 5.3E-8 | – | |
| ProSiteProfiles | 136 | 186 | 51 | 9.657 | ||
| SMART | 136 | 185 | 50 | 0.0077 | ||
| ProSitePatterns | 151 | 160 | 10 | - | ||
| MobiDBLite | 274 | 298 | 25 | - | – | |
| MobiDBLite | 274 | 297 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0146500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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