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LotjaGi2g1v0158900.1

Overview

Field Value
Gene ID LotjaGi2g1v0158900
Transcript ID LotjaGi2g1v0158900.1
Lotus japonicus genome version Gifu v1.2
Description Signal peptide peptidase-like protein; TAIR: AT1G63690.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 2; Swiss-Prot: sp|Q8W469|SIPL2_ARATH Signal peptide peptidase-like 2; TrEMBL-Plants: tr|A0A0B2QVP2|A0A0B2QVP2_GLYSO Signal peptide peptidase-like 2B; Found in the gene: LotjaGi2g1v0158900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:55990274..55997513) extracted from Lotus japonicus Gifu genome v1.2.

ATCCCTGGAAGAGAATACGGAAAGTTACATTCCATACTCAATACGGAAAGCTACTTTCCATACTGAATACGGATTGTTAC TTTCCATACTGAATACGGAAATTACCTTTCCATATTCAATACGGAAGATAACAATCCGTATTATATCACGACTCAGAATT CAAAACACCATCCTTCTAACTACTTAAACTACTTAATCTAACTACTTCCACTACTTAATCCTACAAAATAACAACAAATA AACACATAGACTTACCTCTACTACAACACTTGTTGATAGTGGTGGAGAGCTTGGGAAATGAAGGAGTGGATGGTGGTGGA GAGCTTGGAAATGAAAGTGAGGTAGAAGAGGGTGAGAGAGAGGGTGGTCTGGAGGCATTGAGGAGGTTCAGGAGGGCTGG TCAGGGGTTGGTGAAGGGGTTGGTGAGGGAGGAGTAATGGTGGAAAAAGGGGGAATCATGTCAGAGTTAAATACGGAAAA TACCTTTCCGTAGTCATCAAAATATAATACGGAAAGTACCTTTCCGTATTAAGTTAAATTGAATACGGAAAGTACCTTTC CGTAGGACACTTTTGGGTTTAAAAAAAAAGGGTGGGGCTCGCAGCCCCGATAGGGGAGGCCCCAAACCCAACTCCCATGT TGTTTGGATGGCGTGTCGTCTGAGTCTTTGTAACAGCAGCCTTGTTGGATTGCCGTGCCTTCACCAAGATTGGCCTAATG CATGATAATATGACTACTACTCTACATCCATCCACTGTTCCCTATATATACATATATATATTATAATATGCTTTTATTTC TTGATTATTTTATGCAATGGATGAAATGAAATCGAAACCAACAAAACAAAACCTCTTGCTAATCATGGATTCATGAACCT TACATGAAGAACAACCATCCATGGCTTTTCACAAGATTTGGTGGTGCTGGCTTGTTTTACTCTGTGCCCTGATTCTGCTT CTCCATGATGCTCCTTCTGTCAAAGCAGGGGACATAATCCACGATGATGATTCAACTCCCAAGAAGTCCGGTTGTGCCAA CCATTTCGTTCTGGTAATTTTCCACTCCAACTCTGCTCAAAGTTTGCATCTTTTTCTGTTTTCATTTCTGGGTTTTTAAT CTCAAGGTTGGTCATGGAGGTTTCAAACTTCAATGATCACAGGGTCAAAGTGATTGTTTATGCTAGTTCATGAGTAATCA ATTTAAGTATTGAGTTTCATGTGGTTTCAGGTCAAAGTGCAAACTTGGGTGAATGGTGTGGAGGATGCTGAGTTTGTTGG TGTTGGTGCCAGATTTGGCAGGACTATTGTGTCTAAGGAGAAAAATGCTAGGCATACTCGCCTTGTTCTTTCAGATCCTC GAGATTGTTGCAGTCCACCAAAGAATAAGGTTTCTACCTTTGTTCATATTGTGTTGTTTAGTAATTTGGTTTGGTCAAAG TTGTAGCAAAGTACTATGAATGAGTCAAATTGAATAAATTTCTCATTAAGCACTTGTAATGGAATTTTTTTTTAAATGAT ATTGGAATCTCTTATAAGTTAGCTAAATAGTAGCTTCTATTGTAAGTTAGAATCAGCTTTTTCAATAGCCCCTTTCATTT AACTTTTCCAGTTCTTCATAAATACCTATAAATTTAGAAGGACATTTTTTGCAAGTTAATAACCAATTGTGTATATGAGT AGAAGAACTTCATAAGATCCAAACTAAGCTAATGTTGTTAGTAGTACAACTGAACTGTGTCATATAATTAAACTGTTAGA TTGTGGGAGATGTCATCATGGTGGATCGAGGCAACTGCACATTCACAAAAAAGGCAAATACTGCACAAAATGCCAATGCT TCCGCCATCCTCATCATAAACAACCAAAAAGGTAAGGTTTCTTTTTATTTTTCTTTTGGCACCCTTTTTGTGAGGTTTTG TTTTGTTTTTTTTGTGGTTGGAGGAGTTGCTTCACTGTTAATGTTAGCGCTGGTCATTCTCACTTTTATTTCTCTTTTCA CGTCAATTTTGCTTCTGTTGTTTGCAGAACTTTACAAGATGGTTTGCGATCCTGATGAAACTGATTTAAACATCCACATA CCTGCTATCATGCTCCCACAAGATGCAGGTACAAGGCTGGAAGAAATGCTGATGAGTACTTCATCTGGTGAGTTTAATTT CCATTTTAGAATTATCTGATCTGATGTCTCTTTGACATATTTTGTGGATTTTCTGTAGTTTCTATTTGATATAGTTAGCT GACCGATGGTCACAAATTTGTTACTATTTTTTTGAAAAATTGGCATTTTTTGCAGTGTCTGTGCAGCTATACTCACCACG TCGACCAGCTGTTGATGTAGCAGAAGTATTTCTTTGGCTGATGGCAGTCTTTACCATCTTGTGTGCATCATATTGGTCAG CATGGAGGGCTCGGGAAGCTGCTATTGAACAGGATAAGCTATTGAAGGTTAGCTTTCCAATTCTTGTAGCATTTCCTTGC GCTGAATTCTCATTTGTTCTCTTATTATGCTGATCCTACTAATGTCAAATCTAATTTTTATAGGATGCTTCAGATGAAAT CCCAAACACAAAAGATGCGGGTGTTAGTGGAGTTATAAATATGAACGCAAAAGCTGCAGTCCTTTTTGTTGTACTTGCTT CGTGTTTCCTGTTTATGCTTTACAAATTGATGTCAGGGTTGTTCATTGAGATTTTGGTTGTTCTCTTCTGTATTGGCGGG ACAGAGGTAATACATCAGTTTAAAATTCTTTATTTATGCTTCTATGTGATGAAAAACATGATTTTTTTTTGCATAAAAAA GAATGTAAGAGATCAACATGTATCATATTGCATGAGAGCACTTTATGAAAACTTACTTTCCATTAACAAATTCAAATTCT GTCTTTCCTACTTTTCCCATGGTATCGTCTGCCAAGCCATCTCTAACTATATGTTTTCTTGTATCTACAGGGCTTGCAAA CTTGCTTGGTTGCTCTTTTGTCAAGGTATGATTTGTCATCTTTAATATTACTTTTTGGACGTTATCAATTTATTGTCTTA ACACCCATCTAGTCATTGATATGGAAACAATTCCTGTTTGATTATTTGAGAAGCTCAGATTGGATATTGTAGTGAGTTTC ATGACAAATCCTGTTGTTTGGCTTACCTGTTTCATTACATGATCGGTTTGATGTCTTGATCATGCATTTTTAGTTTTTAT ACAAATGAATATTTCATTAATGACTCTAAAATCTTAGACTAGAAATTCCCAAATGGAATGATATAAGCCTGATATTTCGT GCACAATGATAAGTTATTCTTGATGTAAATAAATTAGTAATCTCGACCTTCTAACATGTGCATATTTTGAACATAATCTC AGAGTGACTGTGTGTGTATATAAGTGGAAATTGTGGGTGGCTTGACAGAAACAATTAGCTGTATTGTGGTAGTCAGTGGT AATAAATAAAACAGCCTAAGCTTGGGTAACTTTCCTACAATTATTTTAGGTGTAGCAATGCTGATGGTGCATTTCCTTCC CATCTGTTCCTCCATAGCCTGATTTTATACTTTTATTAAATAATTCTAAGATGATTTTACCAAGCAGAGCCAAAGATGAA GGATATGTTCCTCCATGATGTTAGGTTTGTTCAACTTGTAGAAGAAACTAATTTTGTTTCTCCGCACAGGTGGTTCAAGC ATGCTGGCGAGTCATACATTAAAGTACCCTTTTTAGGAGCTGTCTCATACCTGACTTTGGCTGTTACTCCATTCTGTATA GCATTTGCCATTCTTTGGGCAGTTAATCGCGATAAGTCGTTTGCTTGGATTGGTCAAGATATACTTGTAAGTATCTTCTC CTATTCAGACATATCATGTAGACTCTCAAGGTCTGAGCCAATTTTTTTCTTTTCTTTGGCTGTGTGCGCGCGCGCGCGCG AGCGTGTTGTGTCCTCCAAATTCCACTGCCCATCAGGATAATAACTTTTCAATTATTAGATTGTGTGTGTAGAAATTCTG TTTACTTTTTATACTTATCAGGATAATGTATTTGTCTGTCAAATTTAAGAATCATTTCTATTTCGTCGGTTATTCTAACA GGGAATTGCACTGATAATGACAGTTCTACAGATTGTACATGTGCCAAATCTCAAGGTAGTTTATTTAAGCTTACACAATC ATTGTGCTGTGACATTATGTCGAAATTGTGAAAATTATTATTGAGTTGTTACTATTAAGTAATAGCCTTTGTATGAAACA TTGCTTCTCCCTTTCCCTCCTGTTTTTATCAGTAAAATACTCACAAATTGATGTTGGAGTCATATTTATATATTTATGTT ATATAATATGTTCCTTTATGAAAAATAAGATACTCATGTCAATACAATTTCATTTTTTGCGAGTTAGGTTGGTACAGTTC TTCTCAGTTGTGCCTTCATCTATGACATATTTTGGGTGTTCATCTCGACGAAGTTTTTCAAGAAAAGTGTGATGATTGTG GTTAGTCTTATTCTTCATTCTAATTCATGACAACCACTAACATCCTATTTAATTACTAATTTTGCTCATGTTTCTTGCTA TAGGTAGCCCGAGGTGATGGAAGTGGAGAAGATGGTATTCCAATGTTACTAAAGTTTCCTCGCATATTTGATCCGTGGGG TGGTTACAGCATTATAGGTTTTGGAGACATCCTTTTACCTGGAATGTTGGTGGCATTCTCACTCAGGTTTTACCTCATCC CTCTTTTTCCCACCAGTAGCCAAGTTTTATGAATTGGAATTTTGCTTTCCATTAGGAAATTTTGTTTGATAGATAATAAC CTGACAAAGGTAGGTGAGTGCAGGAATTTGGAGTAACAGCATTTTCCTAGTACTTCTAGTAAACGAATTATTGTTTTGAG AGGTCCCATTGAATAAGTCCTAGATCCCATAAATGGGTCACCCACTACAATCTTCACACTCTAGATATCCAACCTTGGGT GTGAAAGGGGTGTTAACTGTTAAGGTCCTACATTGACTTAAGGTATGGCTAAATAAGTCATTATAAAAAGTAGAAAAGCC CTCATTCCCGAGTTAGCTTTTGGAGTAGAGTTAGGTCTAATCCGAATATTTAGAATTTTAATTCAGCATTCTATACACAA ACAGAAGAGCAAAGCTAAAAGCTATTTGCGCAGTATACTTTCCTGTTATGTTTTCTGTTTATAAAAAAGGTTTTCCAAAC AATGGTCCTATCTTGCAGGTATGATTGGCTGGCAAATAAGAACCTTCGAAGTGGATACTTCTTGTGGGCAATGTTTGCTT ATGGCTTTGGTGAGAATCAGCTAGTAATTCACCTTTTGTGTGTTATTGACTTCAATGACTTTGTTTTTTCAAACAATGGA AACAAATTACTTCTCAACTGAAGAAACAAGACATTCTTTTATTGTTGACATAGAAGTTACATGATGATTGATAGAGTTCC ATATAACTTAACTTTCTCCAAATATTGGTAGGTCTTCTAATTACGTATGTGGCACTCAACTTGATGGATGGGCATGGCCA ACCAGCACTACTATACATCGTTCCATTCACTCTTGGTACTTTTCATGGGAAAGATAGTTGACTTGTAATCATTTTTTTAT CAAGAAAAATACATTGAGTAATTATATTAGGTACTCATGGTTTGATGCATCAATGCAGGAACCTTTATGGCATTAGGGAA GAAGCGTGGAGATCTGAGGCTTTTGTGGACAAGAGGAGAACCAGAAAGACCATGCCCACATATCAGACTCCAACATAGTG AAGAATTTACCACTTAATAATGATATTGTAACTTCAACCTGTTTTGATATATTGTGTATGTAATGCATGGCTAGCATGGC TGATCTTCTTGAGTTGGATCAAAACCAACCTTTCAAATGCTTAGCACCATAGTGATTTGTAAACCACACCCCTTGAAGGA AGCTGGCTAACATATTCAATGTAGAGTTTGTTAAATAGAAATCTTTTATTACCAAAGGTTATGAGCAGCCTGGTCCAACC ATAATATTAGTGTTTATATATGTGAAACTGCTATAAAGTTGGGGACAGTCAAACAACTGCTACTAGGGACTCATGTTTGG ATTACGTTCTGATCTTCCAAAATTACTTCTACCACAAAACCTAGTTGGAATAGCTTTTGCCAGAATCAATTTTCTTTCTA CCATGAAAATTTAACGCGTGTCCAAACATGCACTAGCACTTAACCTATCATGAATAACAAAATCCGCCAACAGAATCAAA TATTAACAATTGAATTAACATGGTTTTTTCTATTAAACAAAATCTGAAACACATAATTGCCATATTGCAGTTTCGTTGAT AATAACACAGATTAAAATGTGCGCAAACGATTGTCCTTACATTTTCTTTTTAAGAAAAAATGGAATCTAAGAACAGAACA GGTGCTACTATTCTATGTAAACAATAAAGTAGCCAAAAGTTTGATTTTCATTATTTACAAACAAGTGCATTGCAACATGT CATCAGCATTAACAGGCAATGTGACCGGTTAATGAGGAGAATGCGATAAACAGAAAGTTAAAGGATGCAACTTTGAATTC AGCACAAAGATTTCAAAACTTTCAGAATGAAAGTGCTTGAATAGTTCTGTTTCACCAATTGGTTAATCGCATCTATGCAA GAACAGTTCTGATTCTGAAGCTTCCTTAGTTTAAAAATGGCAGTTGAAATGAAAGTATTAAGAAAAAGAAAATAGGAAGG TGATAAAGGAAAGCACGTACCCAAAATCAGAGAGGAAAAAAGTGAAAATAGGTAAAAACATGGTTACAAAGGAAAAGACA AGAAAAAAAAAATTGTCCAATTATATGACACCGAAAAGAATGATCGCTTCCATATCAGATTTAGAAGATCTGAAATAGCA ACAGTACCAATGATAGAACCTGATTTTTATTGATAGAAAACCCTAATTTCCAATTGGAAACTTGGGAGCCATACAAGAGA AAGGGATACCAAACACTCTTCCAAGCCTAAGAGAGAACCACTTCTCTCTCTAACCCAATTCCTAAACTGAATAACAAGAT ACCCCTAATGTTCACTAACTTCCCTTATTTATAGGCAACATGCCTTATTAATACCCTCTAACTAACTACCTAATATGTGA GTACCTATCAGTGACAGACCATTTACATCAAACAATGCTTGAAGGTGAAGAATTTTAAATCTGCATAGAAAATGAAAGTC CAGATTCAAAGTGTACCATATCTGGCAATTTCGAACACAT 

CDS sequence (LotjaGi2g1v0158900.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTTTTCACAAGATTTGGTGGTGCTGGCTTGTTTTACTCTGTGCCCTGATTCTGCTTCTCCATGATGCTCCTTCTGT CAAAGCAGGGGACATAATCCACGATGATGATTCAACTCCCAAGAAGTCCGGTTGTGCCAACCATTTCGTTCTGGTCAAAG TGCAAACTTGGGTGAATGGTGTGGAGGATGCTGAGTTTGTTGGTGTTGGTGCCAGATTTGGCAGGACTATTGTGTCTAAG GAGAAAAATGCTAGGCATACTCGCCTTGTTCTTTCAGATCCTCGAGATTGTTGCAGTCCACCAAAGAATAAGATTGTGGG AGATGTCATCATGGTGGATCGAGGCAACTGCACATTCACAAAAAAGGCAAATACTGCACAAAATGCCAATGCTTCCGCCA TCCTCATCATAAACAACCAAAAAGAACTTTACAAGATGGTTTGCGATCCTGATGAAACTGATTTAAACATCCACATACCT GCTATCATGCTCCCACAAGATGCAGGTACAAGGCTGGAAGAAATGCTGATGAGTACTTCATCTGTGTCTGTGCAGCTATA CTCACCACGTCGACCAGCTGTTGATGTAGCAGAAGTATTTCTTTGGCTGATGGCAGTCTTTACCATCTTGTGTGCATCAT ATTGGTCAGCATGGAGGGCTCGGGAAGCTGCTATTGAACAGGATAAGCTATTGAAGGATGCTTCAGATGAAATCCCAAAC ACAAAAGATGCGGGTGTTAGTGGAGTTATAAATATGAACGCAAAAGCTGCAGTCCTTTTTGTTGTACTTGCTTCGTGTTT CCTGTTTATGCTTTACAAATTGATGTCAGGGTTGTTCATTGAGATTTTGGTTGTTCTCTTCTGTATTGGCGGGACAGAGG GCTTGCAAACTTGCTTGGTTGCTCTTTTGTCAAGGTGGTTCAAGCATGCTGGCGAGTCATACATTAAAGTACCCTTTTTA GGAGCTGTCTCATACCTGACTTTGGCTGTTACTCCATTCTGTATAGCATTTGCCATTCTTTGGGCAGTTAATCGCGATAA GTCGTTTGCTTGGATTGGTCAAGATATACTTGGAATTGCACTGATAATGACAGTTCTACAGATTGTACATGTGCCAAATC TCAAGGTTGGTACAGTTCTTCTCAGTTGTGCCTTCATCTATGACATATTTTGGGTGTTCATCTCGACGAAGTTTTTCAAG AAAAGTGTGATGATTGTGGTAGCCCGAGGTGATGGAAGTGGAGAAGATGGTATTCCAATGTTACTAAAGTTTCCTCGCAT ATTTGATCCGTGGGGTGGTTACAGCATTATAGGTTTTGGAGACATCCTTTTACCTGGAATGTTGGTGGCATTCTCACTCA GGTATGATTGGCTGGCAAATAAGAACCTTCGAAGTGGATACTTCTTGTGGGCAATGTTTGCTTATGGCTTTGGTCTTCTA ATTACGTATGTGGCACTCAACTTGATGGATGGGCATGGCCAACCAGCACTACTATACATCGTTCCATTCACTCTTGGAAC CTTTATGGCATTAGGGAAGAAGCGTGGAGATCTGAGGCTTTTGTGGACAAGAGGAGAACCAGAAAGACCATGCCCACATA TCAGACTCCAACATAGTGAAGAATTTACCACTTAA 

Protein sequence (LotjaGi2g1v0158900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAFHKIWWCWLVLLCALILLLHDAPSVKAGDIIHDDDSTPKKSGCANHFVLVKVQTWVNGVEDAEFVGVGARFGRTIVSK EKNARHTRLVLSDPRDCCSPPKNKIVGDVIMVDRGNCTFTKKANTAQNANASAILIINNQKELYKMVCDPDETDLNIHIP AIMLPQDAGTRLEEMLMSTSSVSVQLYSPRRPAVDVAEVFLWLMAVFTILCASYWSAWRAREAAIEQDKLLKDASDEIPN TKDAGVSGVINMNAKAAVLFVVLASCFLFMLYKLMSGLFIEILVVLFCIGGTEGLQTCLVALLSRWFKHAGESYIKVPFL GAVSYLTLAVTPFCIAFAILWAVNRDKSFAWIGQDILGIALIMTVLQIVHVPNLKVGTVLLSCAFIYDIFWVFISTKFFK KSVMIVVARGDGSGEDGIPMLLKFPRIFDPWGGYSIIGFGDILLPGMLVAFSLRYDWLANKNLRSGYFLWAMFAYGFGLL ITYVALNLMDGHGQPALLYIVPFTLGTFMALGKKRGDLRLLWTRGEPERPCPHIRLQHSEEFTT 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP_EUK 1 29 29 -
Phobius 1 8 8 -
SignalP_GRAM_NEGATIVE 1 29 29 -
Phobius 1 29 29 -
TMHMM 7 24 18 -
Phobius 9 21 13 -
Phobius 22 29 8 -
Phobius 30 198 169 -
Gene3D 38 190 153 5.7E-22
PANTHER 41 542 502 0.0
PANTHER 41 542 502 0.0
Pfam 97 172 76 1.9E-7
SUPERFAMILY 106 144 39 8.5E-6
TMHMM 196 218 23 -
Phobius 199 217 19 -
Phobius 218 255 38 -
SMART 248 515 268 4.3E-88
TMHMM 250 272 23 -
Pfam 251 526 276 4.0E-83
Phobius 256 272 17 -
Phobius 273 277 5 -
Phobius 278 307 30 -
TMHMM 282 304 23 -
Phobius 308 318 11 -
TMHMM 317 339 23 -
Phobius 319 343 25 -
Phobius 344 348 5 -
TMHMM 349 371 23 -
Phobius 349 369 21 -
Phobius 370 375 6 -
TMHMM 376 395 20 -
Phobius 376 394 19 -
Phobius 395 430 36 -
Phobius 431 455 25 -
TMHMM 431 453 23 -
Phobius 456 466 11 -
TMHMM 466 485 20 -
Phobius 467 486 20 -
Phobius 487 491 5 -
Phobius 492 511 20 -
TMHMM 495 512 18 -
Phobius 512 544 33 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Aspartic-type endopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile.
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0158900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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