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LotjaGi2g1v0170100.3

Overview

Field Value
Gene ID LotjaGi2g1v0170100
Transcript ID LotjaGi2g1v0170100.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Receptor kinase; TAIR: AT2G36570.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9SJQ1|PXC1_ARATH Leucine-rich repeat receptor-like protein kinase PXC1; TrEMBL-Plants: tr|A0A0B2NWE1|A0A0B2NWE1_GLYSO Putative leucine-rich repeat receptor-like protein kinase; Found in the gene: LotjaGi2g1v0170100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:58549835..58553109) extracted from Lotus japonicus Gifu genome v1.2.

ACATGGGACATTATATCATGCGGGATCCTTAATGAAAGGTTGAAAGCTGTCATGTTGTGTCACTAATTAATACAATAAAT AAAACAAAACAAGCCTCCTAGTTCAGACCGTTTGTGTCCAATACCATTATCAGCATCTAGGCACAACTTTGCCTTGCCAA CTTCGTCAAACTGAAAAACAATTAACAAACAAGAGTGTATGATTGATATGACTCTGTTCTCACTTCTTGATTGGTTCCAA AACCCATGTCAAGCTTCTTTCTGCATTTTCAACATCCACCATCATCATGAGGTTGGCCTTTAAAAAAAGCTTTTGCTATG TGGTGGTGGTGTTGTTTGTGTCATTGAACTTGGTCTTGTGTGTTGAAGATTTTCATCCAGAAGAAAGAGATGCTTTGTTA GTCATAAGGGATTCTTTAAATTCTTCTCTTGATTTGCATGGGAATTGGACAGGGCCTCCTTGTATAGAGAATCTTAGTAG ATGGATTGGTGTCACTTGTTCCAATTGGCATGTTGTTCATATTGTTCTTGAAGGAGTTAACCTTAGTGGCTTTTTACCTC CCACATTCCTTCAAAACATAACTTTGTTGACCCAGATTAGCTTCAGAAACAATGCAATTTTTGGGCCTCTACCAAACCTC ACAAGTTTGGTGTTTTTGGAACAGGTCTTGCTCTCATTCAATCGTTTCTCAGGGTCAATTCCTGGGGAGTATGTTGAATT GCAAAGTCTTGAAGTGTTGGAGCTGCAACAAAACTACTTGGATGGTAAAATTCCACCCTTTGATCAACCATCATTGACAA GTTTCAATGTGTCATACAATCATCTGGTAGGGCCAATTCCTGAAACTTCTGTTCTTCAAAAGCTCCCAAAGAGTTCATTT GATAATAATTCAGATCTTTGTGGAAAGCAATTGGATAAGTTATGTCCTGCTGAACCTCCTGCTCCACCTCCAATCCCTGC AGTGGAAAGAAATAAGAAGAGACTTCATGTATGGATTATTGCTTTGATTGCTTCTGCAGCTGCACTGTGTCTTTTTCTGA TCATTATTTCTTTCTTGTTTTCTATAAGAAAAGCAAGTAGAAAAGAAACAAGAAGAGATGGTTCAGCAGGTAAGATCATA TCTTATACAACATGTCATCCAACCATTGGCTTTCTAAAACCTTATTACAATGCTATCTATATGAATATTCTAAGAAAAAA ATGAAAAACATTTGTCAAGTGAATCAAGAATTTCATAAAGTACAATGTTGTCTCAAGCTAATTCTGGATTTCTAAGTGCA TGTTTGGTTCAGTATTGTCAAACTTGATTTTGGATATAATTGATTTCGGTAACATTGACTTTGATAAAATTGAGTTGAAA GTGATGTGATTTATGTTTGGATACGTTCATGAGAAAAGTGGTTTCTATAGGGTAAAGATGTGAAATCCAGTTATGAAATC TCATTTATTATGTTCACCACAAAAGTTACCCTCTCTAATTTCAACGCAAAACTGATTTTGGAATTAAAATCCATTCTCCA GGTCTATTGACAGACATCAATATTACCACCTAAAACTGATTATGGTTAATGAGAATTGATTCCAAGGCTCCCAAAGGTGT AACCAAACACACTAAATTTTTTGAACCTTTTGTATTTTTCTTATAGGGTATGTTTTTGGAGCATGGGCAAGGAAGATGGT GTCTTATCCAGGGAACAGTGAAGAGTCTCAAAGATTAGGCCAATTAGAATTTTCCAACAAGAATTTCCCAGTTTTTGACT TGGATGATTTATTAAGGGCATCAGCACAAGTTCTAGGAAGAGGGAACTTAGGTGTTACATACAAAGCAACACTTGAAACT GGCACTGTTGTTGCAGTGAAGAGACTTAGCTCCATGAGTGAATTGAGCAGGAAGGAGTTTCTGCGGCAGATGCAATTGTT AGGACAGATAAAGCATGAAAATATAGTAGAAATTATATCCTTTTATTATTTAGAGGAGCAAAAGCTGATCATATATGAAC TCACCTCTGATGGCAGTTTATTTGAACTCCTACATGGTTAGTTTGATTCTTTCCTTCATTAAATTCCTAAAGAAAACCCA GAATAACTAATCTCATGTTTGGAATTTTGGAATTAACATCCGGGTGTCGCCACCTCTGGGCTTACCCCGCGATTTTTTGA ACTAACCCAGATATTTCGTGCCCCCTCCAGCCAGTAGTACTTTACCTTACCTAGACTCGATCGCAAGACTTGAGGGCTAA GTGGCTACCAATTGAGCTTGGTACATTGAGCACACAAGTAAGGTACCAAGTTAGATGGGATCTAGTGTAAAGTACTTGCT GGAGGGGGCGAGTAAAAGCTCTACGTGTACATCCAGGGCAAGTCCAAAGGTGGGTGACACCCAGATGAACTTCTTTTTCA TCAAAAATCAATTCTGCCACCTTTTAGCTATTACTCGCAGTAGCTTCTCCCTAAAATTGATTTTGACTTTAGAATCAATT GTAGAAGGATTTTAAATACACACTAAGTGTCACACTAACATTCATAATCTTATGGTTCTAGAGGGTAGAGGAGCTGGAAG AGTATCTCTTGATTGGACCACAAGGCTAGCTATTATCAAAGACATAGCAAAAGGTCTTGCTTTCCTTCATCATTCTTTGT CTTCTCACAAGGTTCCTCATGCCAACCTCAAATCATGCAATGTCATAGTCCATCAAGATAGCCAAGGCTACCATTCCAAG CTCACAGACTATGGCTTCTTACCTCTACTCAAAGGTAAAAAGAATGCAGAAAAGCTAGCCATAAGCAAGTCGCCAGAATT TGTTAAAGGGAATAAGAAGCTGAGTCACAAAGCTGATGTTTATTGCTTTGGTATCATCATGCTAGAGATCATAACTGGTA AAGTTCCTGGTCAAATCTTAGGAGTTGAGGAAACAACCAGTGATCTTTCAGATTGGGTGAGAACAGTGGTGAACAATGAT TGGTCCACAGATATATTGGATTTAGAGATTCTAGCAGAAAAAGAAAGGCATGATGGAATGTTGGAGCTAACAGAGCTGGC TCTGGAGTGTACAGATATGGCACCAGAGAAAAGGCCAAAAATGAGTGAAGTGTTGAAGAGAATGGAAGAGATAGAGCAAA TAAAAATAGAGAATGACTAAACAAATTTAAAAGTCACTATAGCATGGTGTATTGTTTTGTATCAAGAGTACCCCATTTGT GTTCATATATTCATCAAAACACTCAATTCAGTTGACAATGATAGATAATCTAAAGTAGAAATTGGCTCCATTACT
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0170100.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATTGATATGACTCTGTTCTCACTTCTTGATTGGTTCCAAAACCCATGTCAAGCTTCTTTCTGCATTTTCAACATCCA CCATCATCATGAGGTCTTGCTCTCATTCAATCGTTTCTCAGGGTCAATTCCTGGGGAGTATGTTGAATTGCAAAGTCTTG AAGTGTTGGAGCTGCAACAAAACTACTTGGATGGTAAAATTCCACCCTTTGATCAACCATCATTGACAAGTTTCAATGTG TCATACAATCATCTGGTAGGGCCAATTCCTGAAACTTCTGTTCTTCAAAAGCTCCCAAAGAGTTCATTTGATAATAATTC AGATCTTTGTGGAAAGCAATTGGATAAGTTATGTCCTGCTGAACCTCCTGCTCCACCTCCAATCCCTGCAGTGGAAAGAA ATAAGAAGAGACTTCATGTATGGATTATTGCTTTGATTGCTTCTGCAGCTGCACTGTGTCTTTTTCTGATCATTATTTCT TTCTTGTTTTCTATAAGAAAAGCAAGTAGAAAAGAAACAAGAAGAGATGGTTCAGCAGGGTATGTTTTTGGAGCATGGGC AAGGAAGATGGTGTCTTATCCAGGGAACAGTGAAGAGTCTCAAAGATTAGGCCAATTAGAATTTTCCAACAAGAATTTCC CAGTTTTTGACTTGGATGATTTATTAAGGGCATCAGCACAAGTTCTAGGAAGAGGGAACTTAGGTGTTACATACAAAGCA ACACTTGAAACTGGCACTGTTGTTGCAGTGAAGAGACTTAGCTCCATGAGTGAATTGAGCAGGAAGGAGTTTCTGCGGCA GATGCAATTGTTAGGACAGATAAAGCATGAAAATATAGTAGAAATTATATCCTTTTATTATTTAGAGGAGCAAAAGCTGA TCATATATGAACTCACCTCTGATGGCAGTTTATTTGAACTCCTACATGAGGGTAGAGGAGCTGGAAGAGTATCTCTTGAT TGGACCACAAGGCTAGCTATTATCAAAGACATAGCAAAAGGTCTTGCTTTCCTTCATCATTCTTTGTCTTCTCACAAGGT TCCTCATGCCAACCTCAAATCATGCAATGTCATAGTCCATCAAGATAGCCAAGGCTACCATTCCAAGCTCACAGACTATG GCTTCTTACCTCTACTCAAAGGTAAAAAGAATGCAGAAAAGCTAGCCATAAGCAAGTCGCCAGAATTTGTTAAAGGGAAT AAGAAGCTGAGTCACAAAGCTGATGTTTATTGCTTTGGTATCATCATGCTAGAGATCATAACTGGTAAAGTTCCTGGTCA AATCTTAGGAGTTGAGGAAACAACCAGTGATCTTTCAGATTGGGTGAGAACAGTGGTGAACAATGATTGGTCCACAGATA TATTGGATTTAGAGATTCTAGCAGAAAAAGAAAGGCATGATGGAATGTTGGAGCTAACAGAGCTGGCTCTGGAGTGTACA GATATGGCACCAGAGAAAAGGCCAAAAATGAGTGAAGTGTTGAAGAGAATGGAAGAGATAGAGCAAATAAAAATAGAGAA TGACTAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0170100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MIDMTLFSLLDWFQNPCQASFCIFNIHHHHEVLLSFNRFSGSIPGEYVELQSLEVLELQQNYLDGKIPPFDQPSLTSFNV SYNHLVGPIPETSVLQKLPKSSFDNNSDLCGKQLDKLCPAEPPAPPPIPAVERNKKRLHVWIIALIASAAALCLFLIIIS FLFSIRKASRKETRRDGSAGYVFGAWARKMVSYPGNSEESQRLGQLEFSNKNFPVFDLDDLLRASAQVLGRGNLGVTYKA TLETGTVVAVKRLSSMSELSRKEFLRQMQLLGQIKHENIVEIISFYYLEEQKLIIYELTSDGSLFELLHEGRGAGRVSLD WTTRLAIIKDIAKGLAFLHHSLSSHKVPHANLKSCNVIVHQDSQGYHSKLTDYGFLPLLKGKKNAEKLAISKSPEFVKGN KKLSHKADVYCFGIIMLEIITGKVPGQILGVEETTSDLSDWVRTVVNNDWSTDILDLEILAEKERHDGMLELTELALECT DMAPEKRPKMSEVLKRMEEIEQIKIEND
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
NON_CYTOPLASMIC_DOMAIN
1 137 137 - –
Gene3D
G3DSA:3.80.10.10
9 121 113 1.3E-24
IPR032675
SUPERFAMILY
SSF52058
14 111 98 1.29E-11 –
PANTHER
PTHR27008
31 501 471 1.3E-183 –
PANTHER
PTHR27008:SF352
31 501 471 1.3E-183 –
Phobius
TRANSMEMBRANE
138 165 28 - –
TMHMM
TMhelix
143 165 23 - –
Phobius
CYTOPLASMIC_DOMAIN
166 508 343 - –
Gene3D
G3DSA:3.30.200.20
191 298 108 1.9E-19 –
ProSiteProfiles
PS50011
223 500 278 31.552
IPR000719
Pfam
PF00069
226 495 270 6.6E-34
IPR000719
SUPERFAMILY
SSF56112
227 498 272 2.63E-52
IPR011009
Gene3D
G3DSA:1.10.510.10
300 507 208 9.8E-37 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0170100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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