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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0174700 |
| Transcript ID | LotjaGi2g1v0174700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A151RK91|A0A151RK91_CAJCA TMV resistance protein N; Found in the gene: LotjaGi2g1v0174700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:59301661..59306616) extracted from Lotus japonicus Gifu genome v1.2.
ATTCCATCGAGCGCAAACACTGCACCATAAAGCTTTCATCATACTATTTCTAACTTTCATCTCATGGCTCTGCTACCCTC CTCCTCCGCCAATGGATTCGCCCACGATGTGTTCCTCAGCTTTCGAGGGACTGATACTCGCCAAGGTTTCACTGGAAATC TGTATAAAGCTCTCCATGACAAAGGATTCCGCACCTTCATTGATGATGAGGAGCTTCACAAAGGGGAGCAAATCACACCA TCACTTCTCAAGGCAATTGAACAGTCCAAGATTGCCATCGTTGTTCTCTCTGAGAACTACGCATCTTCGTCGTTCTGCTT GGAAGAACTTTCCAAGATCATTGACTGCATTGAGGAAAAGGGTCAGTTGGTCTGGCCGGTTTTTTATGATGTGGATCCTT CTGATGTGCGAAAGCTGACAGGAGCTTATGGAGAAGCAATGGCTAAGCATGAGGAGAGGTTCAAGGATCACTTGGAGAGG TTGCAAAAATGGAGGAAGTCTTTGCAGAAAGTAGCTAACTTGTCTGGATGGCATTTCAAACAAGGGTATGTTCTTTCTTA TATTTGTTTCTCTGCTTTCTCTAGTTTTTTTTTTTCTCTAGTCTCTGCTTTCTCTAGTTATTATAATAATTTCAGTTAAT TATTAACCTTAAAAGAGTATGGCCACATGACTCAAAATCTTATGTCGTAACTGGGGCAAATACTACCATAATAGTCTGAC AAGTCTCTTTCCCATAAAATTATTTTCAAAATATTCCAAATTCAAATATCAATAAAACAAAAATAACAGTTCAAAACCAA TCCACCTCAAACTCAAACTCCCTATATGTGCATCATAACAAAAATCCAATAAAAGACACCAATAAAGTCATCATCCACTA CAGGAGTCCTAGCTACCAAAACGATAAACTGAATGATTAGAATATGCAAATAGCTTTCTACTCAGGTGCTTGAATATCTG TAGATGAAAATAAATGATGGTGTAAGTCACAGAGATCTGGTAGTGGTAAAGATTTAGCAACCAGTCAACCACCATAAACA ATAAGGGAAACACATCCAACACAAATTTTTCAATCTCATAATCAACGTTAAACAATTTCAATCATCAATCAAATTAGTTC AAACCATTTCAATGATGACTGTGATAAAATTTGTAAAATTTATGAATAAGTGAAATTTGATAAAATCACCGTGAAAAAGA AGGGGAAACACATCACTCTTATACTCTATACAAACAATTTCTATCATCAACAATATCAGCTCTAATAATATCAATGATGA GCGTGCTAAAACTTGTAAAATTTATAAGTAATCATTTCAAAGGAATTTGATAAAATCACGCCAATCTATGCAAAAATTAA AATCTGAAATTTAATATGGTAGAGTTAGACATGATGAACCATGAGTAAACTCCATCTCGTTGATTCATAGACCTCTCCTG CTAAGAGATCATCTCTCCGATAGGGGCAGCTTCATCTAATAAATAATTATTTCCTCTATCGTATCATATGTCATCTCACA TCGTCGATAGAAGTTACATCTTGTTGATAGCCCTCTCCGTGCATTGAGTTCTCTCGTCCTAGAATCAAAATAACCCGGTG CACCAAGGTCGTTACCCTTGCTAACGGCTACGGGGTCTTATCAAGGATCCCAAAACAATCTTTCAAATATGTAAACAAAC TCATGCCAAAAGTATCAGACACAAGCTTTCAAAACTCATCAAGATCTCTCAAGACCACATTCTCATTTTCACATCATTCT AAATTCAAACCAGAGTAAACTTCTTCTCATAACAAATCACAATCATGCTATAAAGTCAATTAAATAAAATTCACAGCGTT GAGAAGTTCAAGAATAATAAAACCATGTTTCCCAATTTTAAATGAATAAACAATATGATAAAATAATTTAACTTGTAATT ATGGAATACTTAAATACGTCATAATAATTGAAAACCCCTACCGATACGGATAGCCTAAATGGTACTTGATGGATTAGAAT TCTCCAAGTCTAGGGTTTAAATCTTACCAGTATCTAGATACAAAAAAAAAAATTGAAAACCACTCCCAACTACGAAAAAT CAACACGATTGCTCCCTACAACTCCAGGATACCCGAACAAACCATTAGCATGCCAATATGTACACCAATAATAAATTTCG GCCCCGTTTGGAAAAACAGCTTAATTAAACGCTTATGGTCATAAGCGCTTATGACCATAAGCGCTTATTCATAAGCTATT TTTAAAGTCTATTGAAATAAATTAAAAATAAGCTGTGTATAAGCATAAGCTGTTTTTCATAAGCTATCCTGAGTAACTTA TGAAAATAAGCTGAAAATAGCTTATGGCAGGACATAAGCTGTTTGCATAAACTCTCCCAACTGACATAAGAACTTATATT GTCAGATAAACTCAAATAAGCTCTTCAAAACTTGACCTTTAAATCTTAAGCTACTATTATCTCATGTCATACTACCCTTA AGCAACTATAAATACGCAAAGATGTGCTCAAAGCTCTAAGAATAATTCTACCCAAGTCTAACATACACTATAGTGTTGTT TTTTTAAATATATGAGTTGTGAGTATACCTAAAAAAAATCAAATGAGAAATTAACCTTGAAGGGGTGGCTACTCTTCTGC TTCCTTAGATCACAAATTCTAACCCCCAAAATTTATCACAAGAGTCTTCCATTTGAATGATTAATTTTTTCCTTTAAAAA TGTGTATTTTTATGGTGGGGGTTTGTGAGGAACGAGAAAAGAATAACGAAGAAGAATTTGAGAGAGGGGGCGCTACTGCA GTGCAGAGAAGAGCGAGAGAAAGGGAGAGACGCAGTTTCTTTTAGAGATAAGATTTCGGGTTACAGTTTTGAGAATTTGA AAAGGTGTTGTGTTGTTTTATTTATGGTTAGTTTATCATCTTATTTTAATTTTTTTTCTTATCTTTTTCTGTAAAAACTG ATGTAGTACATTTCAACAAACTTCATTTTTCTCTTTTGGGCAGGGATGGATATGAATATGAGTTTATTGGGAAGATCCTT GAAGAAGTCTCAAGAAATATCAAATGTGTTACTTTACATGTTGCTGATTACCCAGTTGGATTGGAGTCCAAAGAGTCAAA TTTCAAATTGCTTTTGGATGTTGGGTTTGATGATAGAGTTCACATGGTAGGAATCCATGGGATTGGCGGTATTGGTAAAA CAACCCTTGCTCTATCAGTTTATAATTCAATTGCAAGCGATTTTGAAGGTTCTTGTTTTCTCGAAAATGTTGGAGAAAAT TCAAATAGATATGGGCTACTACATCTTCAAAAGACCCTTCTTTCTAAAATAATTGGAAAAATGAATGTTGACTTAACAAG TGTTAAGGAGGGAAGCTCAATAATACAACATAGGCTCCGACAAAGGAAGGTTCTTTTGATTCTAGATGATGTCGACAAGC GGGAGCAATTGGAAGCTATTGTTGGTAGGCCGGAATGGTTTGGTCCCGGCAGTAGAGTAATTATTACGACACGGGACCAA CAATTGCTAACAAGTCATATGGTTGAAAGAAAGTATGAGATGGGGGAGTTGAAGAATGAAGATGCTCTTAAGTTGCTCAA ATGGAAGGCCTTCAAAACTAATGAAATTAGTCCAAGTTATGTTGACATTTTATCCCGTGTAGTAACTTATGCTGCTGGTC TTCCATTGGCTTTGGAAGTTATAGGTTCTTACCTGTATAAAAAAAGCATAGAAGAATGCAAACATGCATTAGATCGGTAT GAAAAGATTCCCATTCAAGAGATCCAAAAGGTACTCAAGGTGAGCTATGATGCATTGGATGAAGAAGAGAAGAGTGTTTT TCTTGACATTGCTTGTTGCTTCAGAGGATATAAGTTGACAAAACTTGAAAAAATACTTCATGCTCATTATGATGACAACA AGAAACATCACATAGGAGTGTTGGCGGAAAAATCTCTAATTAAAATTATTGGGTTTGGTTATGTGACATTACATGACTTG ATAGAGGATATGGGCAAAGAAATTGTCCGACAAGAATCTCCGGAAGAGCCTGGAAAGCGCAGTAGGTTGTGGTTTCATAA AGATATAGTTCAAGTTTTAAGAGAAAATACGGTGAGTGAGATTGGTATGGATAGTTTTGCCTTTCATCTTAAACTTCGAC TTATCTCTTTTAACTATTACTGCTATGAATATTGACACGGTACTCCTTTTCCTCCTTATAGTATGTAAATTTCTCTATAT ACTTGTGTTGAAGTTCTTATATATATATATATGCATGTATATCAATTGATTTGTCATTTGTGCTTTATCGTGTTAACAGG GATCAAGTGAAACTGAAATTATATACCTTAATATTCCTGAATTTGGAGAAGTTGCAGAATATGAAGCAAAGACTTTCAAG AACATGAAAAATCTCAGAACACTCATTGTTAAAAACTGTAAATTTTCAAAAAAAATCAAGTATCTTCAAAATAGCTTAAG AGTACTCATATGGGACCAATATTCTTCAGAAGGTTTGAAGGTATGAAAAACGGTAGAAAGGGGGGGTTTGAATAACGTTT TCAGTATAAAACTTCCACCTTAAAGATTTTGACAAATCTTTCGAGAACTTAAGTGCTAAAGATAAGAGATAGAAAAGCAC ACAAGGATTTTATCCTGGTTCACTTGATAAATCACTCAAGCTACTCCAGTCCACCCGTTAAGGTGATTTCTTCCTTCTTA GAATGAAGGCAATCCACTAATCAGGTAAGAGTTACAACTGCACTTGAAACCTACAAGTGACTAACAATTACACTGACTTA GCTCACACTAAGATTCACTCTCTTAGTCTTCTCTAGGATCCGATCAGCCTTGATCTCCTAAATGAACTAAACAAACTGTT TATCAAAAAATTGTTTACAAGAGATTTGCTTCTAAAAAGCTAATAGTAAACTCAATGAATTTCAGATGAAAGAAAG
CDS sequence (LotjaGi2g1v0174700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCTGCTACCCTCCTCCTCCGCCAATGGATTCGCCCACGATGTGTTCCTCAGCTTTCGAGGGACTGATACTCGCCA AGGTTTCACTGGAAATCTGTATAAAGCTCTCCATGACAAAGGATTCCGCACCTTCATTGATGATGAGGAGCTTCACAAAG GGGAGCAAATCACACCATCACTTCTCAAGGCAATTGAACAGTCCAAGATTGCCATCGTTGTTCTCTCTGAGAACTACGCA TCTTCGTCGTTCTGCTTGGAAGAACTTTCCAAGATCATTGACTGCATTGAGGAAAAGGGTCAGTTGGTCTGGCCGGTTTT TTATGATGTGGATCCTTCTGATGTGCGAAAGCTGACAGGAGCTTATGGAGAAGCAATGGCTAAGCATGAGGAGAGGTTCA AGGATCACTTGGAGAGGTTGCAAAAATGGAGGAAGTCTTTGCAGAAAGTAGCTAACTTGTCTGGATGGCATTTCAAACAA GGGGATGGATATGAATATGAGTTTATTGGGAAGATCCTTGAAGAAGTCTCAAGAAATATCAAATGTGTTACTTTACATGT TGCTGATTACCCAGTTGGATTGGAGTCCAAAGAGTCAAATTTCAAATTGCTTTTGGATGTTGGGTTTGATGATAGAGTTC ACATGGTAGGAATCCATGGGATTGGCGGTATTGGTAAAACAACCCTTGCTCTATCAGTTTATAATTCAATTGCAAGCGAT TTTGAAGGTTCTTGTTTTCTCGAAAATGTTGGAGAAAATTCAAATAGATATGGGCTACTACATCTTCAAAAGACCCTTCT TTCTAAAATAATTGGAAAAATGAATGTTGACTTAACAAGTGTTAAGGAGGGAAGCTCAATAATACAACATAGGCTCCGAC AAAGGAAGGTTCTTTTGATTCTAGATGATGTCGACAAGCGGGAGCAATTGGAAGCTATTGTTGGTAGGCCGGAATGGTTT GGTCCCGGCAGTAGAGTAATTATTACGACACGGGACCAACAATTGCTAACAAGTCATATGGTTGAAAGAAAGTATGAGAT GGGGGAGTTGAAGAATGAAGATGCTCTTAAGTTGCTCAAATGGAAGGCCTTCAAAACTAATGAAATTAGTCCAAGTTATG TTGACATTTTATCCCGTGTAGTAACTTATGCTGCTGGTCTTCCATTGGCTTTGGAAGTTATAGGTTCTTACCTGTATAAA AAAAGCATAGAAGAATGCAAACATGCATTAGATCGGTATGAAAAGATTCCCATTCAAGAGATCCAAAAGGTACTCAAGGT GAGCTATGATGCATTGGATGAAGAAGAGAAGAGTGTTTTTCTTGACATTGCTTGTTGCTTCAGAGGATATAAGTTGACAA AACTTGAAAAAATACTTCATGCTCATTATGATGACAACAAGAAACATCACATAGGAGTGTTGGCGGAAAAATCTCTAATT AAAATTATTGGGTTTGGTTATGTGACATTACATGACTTGATAGAGGATATGGGCAAAGAAATTGTCCGACAAGAATCTCC GGAAGAGCCTGGAAAGCGCAGTAGGTTGTGGTTTCATAAAGATATAGTTCAAGTTTTAAGAGAAAATACGGTGAGTGAGA TTGGTATGGATAGTTTTGCCTTTCATCTTAAACTTCGACTTATCTCTTTTAACTATTACTGCTATGAATATTGA
Protein sequence (LotjaGi2g1v0174700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALLPSSSANGFAHDVFLSFRGTDTRQGFTGNLYKALHDKGFRTFIDDEELHKGEQITPSLLKAIEQSKIAIVVLSENYA SSSFCLEELSKIIDCIEEKGQLVWPVFYDVDPSDVRKLTGAYGEAMAKHEERFKDHLERLQKWRKSLQKVANLSGWHFKQ GDGYEYEFIGKILEEVSRNIKCVTLHVADYPVGLESKESNFKLLLDVGFDDRVHMVGIHGIGGIGKTTLALSVYNSIASD FEGSCFLENVGENSNRYGLLHLQKTLLSKIIGKMNVDLTSVKEGSSIIQHRLRQRKVLLILDDVDKREQLEAIVGRPEWF GPGSRVIITTRDQQLLTSHMVERKYEMGELKNEDALKLLKWKAFKTNEISPSYVDILSRVVTYAAGLPLALEVIGSYLYK KSIEECKHALDRYEKIPIQEIQKVLKVSYDALDEEEKSVFLDIACCFRGYKLTKLEKILHAHYDDNKKHHIGVLAEKSLI KIIGFGYVTLHDLIEDMGKEIVRQESPEEPGKRSRLWFHKDIVQVLRENTVSEIGMDSFAFHLKLRLISFNYYCYEY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 4 | 156 | 153 | 5.1E-43 | ||
| Gene3D | 8 | 186 | 179 | 4.0E-69 | ||
| PANTHER | 11 | 532 | 522 | 4.2E-234 | – | |
| PANTHER | 11 | 532 | 522 | 4.2E-234 | – | |
| ProSiteProfiles | 12 | 153 | 142 | 29.084 | ||
| SMART | 13 | 153 | 141 | 8.2E-43 | ||
| Pfam | 13 | 178 | 166 | 2.7E-44 | ||
| Coils | 126 | 146 | 21 | - | – | |
| SUPERFAMILY | 185 | 443 | 259 | 1.07E-62 | ||
| Gene3D | 187 | 346 | 160 | 2.4E-31 | – | |
| Pfam | 214 | 433 | 220 | 1.3E-30 | ||
| PRINTS | 215 | 230 | 16 | 2.8E-19 | – | |
| PRINTS | 291 | 305 | 15 | 2.8E-19 | – | |
| PRINTS | 384 | 398 | 15 | 2.8E-19 | – | |
| SUPERFAMILY | 420 | 526 | 107 | 2.69E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi2g1v0174700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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