Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0191100 |
| Transcript ID | LotjaGi2g1v0191100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase; TAIR: AT5G59680.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9FN93|Y5596_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g59680; TrEMBL-Plants: tr|A0A0B2QSB5|A0A0B2QSB5_GLYSO Putative LRR receptor-like serine/threonine-protein kinase; Found in the gene: LotjaGi2g1v0191100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:62247996..62253525) extracted from Lotus japonicus Gifu genome v1.2.
CAAAGTTAATCTTGGTGTAAACTATAATCATATTGTCTAAAGTCAACTGTGTGCATATATCATTAGTGAAGCTATTATGA CATCTTTATATATAATCACTAACATGCTTAGCCTAAACACAAGACTCAAGCTAGTCACCTTTCATAAACCTCTTCACAAA CATCCATGAAAATCCCTTCAATTTTTCTTTTAGCCTTAGCACTTTGGGTGCTACTGTCCACAAAGCCTTCTCTCACAGTC TTTGTGAGCATCAACTGTGGATCCTCAAAATATGTCACAGATGAAAACAACATAAGATGGACTGGTGATGATGATTACAT CCAACATGGCGTGTCACGCCAAGTCTACTTGGGTTCTGACCCATTGAGCACTCTTAGGGAGTTTCCAACTAGAAAGAAGA ATTGCTATTCCATCAAAGTTCCTAAAGGAGAAAAAGTTCTTACCAGAGCAAGCTTTTACTATGGGAATTATGACAGCAAA TTCTCTCCACCTGTCTTTGATCTTCAGTTTGATGGAAACTACTGGGCCACTGTGAACACCTCAAGTTACTATTATGTTGA TTATGAAGCAATCTATGTGGCCAAGGGAAACTTCACTAGCATATGTGTTTCTCAAACAAAGCCTAACCAGATTCCCTTTA TATCATCCCTTGAAGTTCGCAGCTTGGACCCTTCTATGTACAGTCATGTTGATTCCAATCATGCATTGAATTTGCAATGG AGATCTGCTTTTGGTGTAAATCAAAGTATCAGGTATTCTCAAATCTCAATCACAGTACTAATAGTCCAATCATGACCTAT GATCCATTAGAGCATTTTTGGATCAATTTCTATTTCATCATAATAATTTTCAAAATCTAGAAGCTAATAACATAAGCTTC TCCTTAAAATTGATGCAGCCAAGTTCATCAAAACTCCCACTATGTGCAGGTCCGGGAAAGGGACCTTAGGCCCTGTTTGC ATTTATATTAGTGTTAGGTAGAGTTTATGCAAATAATTTATGACTTACCTATAAGTTGTTTTTAGCTTATTTTCATAAGT TGTTATGATTAACTAATGAATAAGAGTTTATGCTTACCCATAAGCTATTTTTGGCTTATAATAAGTTTCTCAAATTAGCT TATTATGAATAAACGCTTAATTAAACTGTGTAGCCAAATGCACGCTTGATCTATTGTAGGCACCCTTATCCTGATTTTTT AATTTTAAATAAGAGGCGGTTTTCAAGACTTAAACATTTGACCTCAGTCACATAGCAACAACTTTGTAGGGTTGTGCCAA GGCTTCTCTTTGACTTTAATGCTAAAATTTATTAGCTTATTATTGGATTGAAAATATGTATGAGATAAACTTAAGTCCAA TTTTTTTCATTTAACTTAAAAATCATGTGATATTTCATTACATCATTATAATAAGGGGTTGTCTAAATGACCCTAGGTAA AAAATGGGTTAAATAACCCAAGCCTATATGTTCCAATGATATTATTACATGTGTCTTTTAAAAAATTCCAACTCATATTA CATGTGTCATCCTAAAATCCAACTCATTTCATTATTCATTTTTTTATATTTTTGTGAAATTCATTTTATGAAATAAATTA TTTATACTTTGAATCCATCAATTAGGATAAACTAAATAACAAAACTTTTTTCCCCAAAAATGAAAAAATCAAGAACCCTA GTCCCTAATTTTATATGTTTTCAATTTAGAATCAAAAGTTCCACCATTGATGATGAAGATCCTTGTCATGTCCAGGATAA AGCAAACCAATATCGCCATGATATCAAGAGCTATTGGCCTCCCACCTATGTATGTACAAGAAATCAAGATCCGAGTTATA ATTTTTTTTTTTCTCGCAAATACCATGATGATGGTTTTTAATTTCCATTAGCATTTGCACAATTTCTACCTTTCTTGTTA AAAGTACAAAAAAATGCAAACTCTTTTACTATTTTTCCATACCCCTAGCATCAACGAGTTTCAAACAACTGCATCACTTT TTTCCAAGAAGGCAAAATTAATCAAACAGATGCTCTGGCAGATTATATTTAATCACTCTTTCCTGAATAAAGAACAAAAT GTATACGTGGTGAATGTGCATTATTCATTGCGGATTGAATAATACTTATCCCAAAGAGTTTGTGATATTGAGATTTCATT CATAAGACTCTTGAACTTGACACTGCAATCTCCTCCACTTATGCGATTCAAGGAGGCAACAAGATCCGAGTCATAGATTG ATATAAAAAAAAAAAGAAATCGATTAGAATTAGAAGGGAGTGACCGCATTTTGGACATGAATCTCAAAATATTATCACTG AAATTGGAGATTAGGGTTGTTGATTTTGTTTTTTCATGTGCTAGAATTAACTATGGTTCAGTGATTATCAATGGTGGGAT TGAAATAAAACATTCGAAATCGGGGATTAGGGTTCTTGATTTTATTTTATTTTTATGAGAAAAAAAGGTCCATTGTGCAG TTTATACTAATTGATGGGTTCAAAGTATAAATAAATTATTTAATGACATAAATTTGAAAAAATATTTAAAAAATAAATAA TGAAATGAGCTAGATTTTATGATGACACATATAATATGAGCTGTAATTTTTGTAAAGACACATGTAATAATACCATGAGA CACCTAGGCTTGGGTTATTTAATCCATTTTTTACCTAGGATCATTTAGACAACCCTTATAATAAACTATGGAAAGATACA TGAATGTCCATTTGTTTAAAGGTGCTTGCTGTGGTACCTTAATTTAAATGAGGGTACGGTACCTTAAATGATGTAAAACT TATTTATCTCCAAAAATTTTAACTTCTAAAAGCCTCTAGCACCATCATTCATGAACATTTTAGTAGATTATCTCATTATC TTGTTGTTTGCCAGACACCAATTTCCATATCTTACCCTTATTGTGGTCGATAACTCTCTTGTTCTTACATCGCATACATT TCCACTTCCACAACTAGATTCTGACTTAAAAAGAGCTGCAACAACCAATATGACGTCTAAGATTCCAACAAAAGTTAAAA TGTCTAATTGTCTCTTTTTTTCTACCCTTCAATTTCACAATTTCATCTAGTCGGGGTACCGTACCCAAAAGAATTTCAGG GTACCACAGAATTTACCTTGTTTAAATTATGGTGTTTGACTTTATTGTTGTTGCGTAAATTGGAATTTGCTAGGTACCCA GATGATGTTTTTGATAGAATATGGAGAGCAGCATATGGTATATTGCTTTCAGAAGTCAAAGGTGAGGTATCAGACATTGA TATTAATACAGCAGAAGATCATCCACCAGAAGCTGCACTGCAAAATGCAGTTGTTTCCTCAGGCACTAATTCATACATCC AGCTTATCAATCGGCTTCCGGCGAAGGCACTTCCGGTTTACATCGCCACTTACTTCTCAGAATTACAGGAAAGTGCACTT GGTAAAAGATCCTTCCAAATGTACATAGACAACAAGCCCTTTTCAAGTCCAATAGTTCCTCCTGTTGGAAGTGTGAAAGA AGTGTACATCACCAACATGACAGCTTCAGCAGACACTTTGTTTACTCTTCAGGCCACAGACACTTCTACCCTTCCTCCTA TACTCAATGCTCTTGAAGTTTATACAATAAGTGATGCATTAACTGCAGGAACAGATAGCAGAGATGGTAAGTGTGTTATG TACTTGTAGCTTGTTATTTGCTTGGATGTTTTGAAAGGAAGATGATGGTGTAGAAGGAAGATGTGGATAGAGGGAATTTA CCTTTATCTTGCTTCTATGTTTATTCCCAAATAGGAGTGTTGTTAATGATGGATAGTGGATGGTTGCGTAAAGCCAAAAA CATGCCATATTTGTCAAATACTGATGGCGAGAATATCGGCCATGGTTGAGTGGTGGAATTCATCCACGAGATTCCGCCAT GACTGATATTTGCCAACACTGCCAATTTTTACATAAGTTATTAAAAGCTCTTTTTTCGGTGAAAATAAGGTAAGTAATAG CACGTTTGGAACAATTTATTTTTTTCTTAAAATCGATTCTATAGTGAGGAGCTACTCACACAACCTTTTCCCCATAATTG ATTTTGACTTTAGAATCAATTGTAGAAGAATTTTCGAACTTTTCTAAATTTTCTTTTCCTAAATAATTTCTCTGTTTATT TTCCATTTTAATTATCTATCATAGCTCATTTAAAATCCTTTGTAGAAGTGTTACTAGTTTTCCATGAGTTCCTTTTCTCT ATTAGCTTTGCATTAACACCAATTTGTCCTCTGTATTTTCTTTTGTCAAATTAGTGGAAGGTTTGTTACAGCTGCAATTT GCATTTGAAGTTCTAGTAGAGTGGAGTGGGGACCCTTGTCTTCCATATCCATATAACTGGGATTGGATAGAATGTACCAC TGATGCCAAACCTCGTGTAACAGCATTGTAAGTTACTTGGTATTACTTTTTTTCCAAATCAAGTTTTGAAGTTACATATA ATAGCTACTAATTTTGTGACATTATGTGATTAAAAAAACCATAGGTATCTCAGTGGTTATGATCTTCGAGGCACACTTCC AGATTTCAGTTCCATGAATGCACTTGAAACAATGTGAGATTTACTTACAAAACCTTTGTTTCATCTGGGCTGAAATGATC ACCAAATTATAAGTTTCTAATAACTTGATGAATCATATGTTTTCCTGAATTGCAGTGATTTGCATAACAATACCATAGAA GGCACCATTCCTGATTTCCTAGGTCTTCTACCTAATCTCAAGACACTGTAAGTAATTTATTCTTGTATACATTGTTGTTT AAAGAAATGCAACACATGCTTTGAGCTCTATATATTGAAAAAAATCCAATTCTCTGTGCAGGAACTTGTCTTACAATAGG TTCAATGGTTCCATACCCGCATCTCTAAAGAAGAAGAACATAAAAACTGAGTAAGTTGAAATTTTCTCTACTAGCTTTTT AGCAGCTAGAGTAGAACATAATTTCCTAGCAATTTTTCTTCTTTAATTATCATTCTAACTTTCATTTAATTTGCTTATTT TAGCACAACAAATAATTGTCTCTCGGGAATTAAGTGTCAACCTCTCAATGATTCTCCACCACCACCGCCACCTCAACTCT TTTCAGGCGATGAACCGAATAATCCACCGCCTCCGCCGTTGAATCTTTTTGCTGGGGATGATTCAGTAGGAGTGGGAAGT GGAAGCGTGAAGAATAACAAGCTGAACATATTAGTCATAGTAGCTACTTTGCTACCACTGCTTTTCGTGAAATTTATATG AGAAGGATAGTTTTGTTTCATTTGTTAAGAAGATTATCATCAAGATGTTAAGCTAGTCTTGTACTGTGTGTCTCTTCTAA TGTTGCTTCCATTTTCTCCTTTTTATTTTATCTTTTTCTTTATGCAAATTAGCTTGTGTATTCAAACGATTCTATAATTG TTGGAAGTGATTTGTGCGCTACATGTTATGGTCACATGTAATTTATATGTTTTTAATCCACTACAATAGTCAATATCAGT TTTAGGCTTT
CDS sequence (LotjaGi2g1v0191100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAATCCCTTCAATTTTTCTTTTAGCCTTAGCACTTTGGGTGCTACTGTCCACAAAGCCTTCTCTCACAGTCTTTGT GAGCATCAACTGTGGATCCTCAAAATATGTCACAGATGAAAACAACATAAGATGGACTGGTGATGATGATTACATCCAAC ATGGCGTGTCACGCCAAGTCTACTTGGGTTCTGACCCATTGAGCACTCTTAGGGAGTTTCCAACTAGAAAGAAGAATTGC TATTCCATCAAAGTTCCTAAAGGAGAAAAAGTTCTTACCAGAGCAAGCTTTTACTATGGGAATTATGACAGCAAATTCTC TCCACCTGTCTTTGATCTTCAGTTTGATGGAAACTACTGGGCCACTGTGAACACCTCAAGTTACTATTATGTTGATTATG AAGCAATCTATGTGGCCAAGGGAAACTTCACTAGCATATGTGTTTCTCAAACAAAGCCTAACCAGATTCCCTTTATATCA TCCCTTGAAGTTCGCAGCTTGGACCCTTCTATGTACAGTCATGTTGATTCCAATCATGCATTGAATTTGCAATGGAGATC TGCTTTTGGTGTAAATCAAAGTATCAGGTACCCAGATGATGTTTTTGATAGAATATGGAGAGCAGCATATGGTATATTGC TTTCAGAAGTCAAAGGTGAGGTATCAGACATTGATATTAATACAGCAGAAGATCATCCACCAGAAGCTGCACTGCAAAAT GCAGTTGTTTCCTCAGGCACTAATTCATACATCCAGCTTATCAATCGGCTTCCGGCGAAGGCACTTCCGGTTTACATCGC CACTTACTTCTCAGAATTACAGGAAAGTGCACTTGGTAAAAGATCCTTCCAAATGTACATAGACAACAAGCCCTTTTCAA GTCCAATAGTTCCTCCTGTTGGAAGTGTGAAAGAAGTGTACATCACCAACATGACAGCTTCAGCAGACACTTTGTTTACT CTTCAGGCCACAGACACTTCTACCCTTCCTCCTATACTCAATGCTCTTGAAGTTTATACAATAAGTGATGCATTAACTGC AGGAACAGATAGCAGAGATGTGGAAGGTTTGTTACAGCTGCAATTTGCATTTGAAGTTCTAGTAGAGTGGAGTGGGGACC CTTGTCTTCCATATCCATATAACTGGGATTGGATAGAATGTACCACTGATGCCAAACCTCGTGTAACAGCATTGTATCTC AGTGGTTATGATCTTCGAGGCACACTTCCAGATTTCAGTTCCATGAATGCACTTGAAACAATTGATTTGCATAACAATAC CATAGAAGGCACCATTCCTGATTTCCTAGGTCTTCTACCTAATCTCAAGACACTGAACTTGTCTTACAATAGGTTCAATG GTTCCATACCCGCATCTCTAAAGAAGAAGAACATAAAAACTGACACAACAAATAATTGTCTCTCGGGAATTAAGTGTCAA CCTCTCAATGATTCTCCACCACCACCGCCACCTCAACTCTTTTCAGGCGATGAACCGAATAATCCACCGCCTCCGCCGTT GAATCTTTTTGCTGGGGATGATTCAGTAGGAGTGGGAAGTGGAAGCGTGAAGAATAACAAGCTGAACATATTAGTCATAG TAGCTACTTTGCTACCACTGCTTTTCGTGAAATTTATATGA
Protein sequence (LotjaGi2g1v0191100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKIPSIFLLALALWVLLSTKPSLTVFVSINCGSSKYVTDENNIRWTGDDDYIQHGVSRQVYLGSDPLSTLREFPTRKKNC YSIKVPKGEKVLTRASFYYGNYDSKFSPPVFDLQFDGNYWATVNTSSYYYVDYEAIYVAKGNFTSICVSQTKPNQIPFIS SLEVRSLDPSMYSHVDSNHALNLQWRSAFGVNQSIRYPDDVFDRIWRAAYGILLSEVKGEVSDIDINTAEDHPPEAALQN AVVSSGTNSYIQLINRLPAKALPVYIATYFSELQESALGKRSFQMYIDNKPFSSPIVPPVGSVKEVYITNMTASADTLFT LQATDTSTLPPILNALEVYTISDALTAGTDSRDVEGLLQLQFAFEVLVEWSGDPCLPYPYNWDWIECTTDAKPRVTALYL SGYDLRGTLPDFSSMNALETIDLHNNTIEGTIPDFLGLLPNLKTLNLSYNRFNGSIPASLKKKNIKTDTTNNCLSGIKCQ PLNDSPPPPPPQLFSGDEPNNPPPPPLNLFAGDDSVGVGSGSVKNNKLNILVIVATLLPLLFVKFI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 1 | 24 | 24 | - | – | |
| Phobius | 6 | 17 | 12 | - | – | |
| PANTHER | 18 | 485 | 468 | 1.1E-154 | – | |
| Phobius | 18 | 24 | 7 | - | – | |
| PANTHER | 18 | 485 | 468 | 1.1E-154 | – | |
| Phobius | 25 | 527 | 503 | - | – | |
| Pfam | 29 | 341 | 313 | 3.4E-75 | ||
| Gene3D | 357 | 475 | 119 | 2.1E-24 | ||
| SUPERFAMILY | 371 | 459 | 89 | 1.89E-16 | – | |
| Pfam | 441 | 462 | 22 | 0.084 | ||
| MobiDBLite | 481 | 510 | 30 | - | – | |
| MobiDBLite | 482 | 509 | 28 | - | – | |
| Phobius | 528 | 545 | 18 | - | – | |
| Phobius | 546 | 546 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0191100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…