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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0193500 |
| Transcript ID | LotjaGi2g1v0193500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|P42825|DNAJ2_ARATH Chaperone protein dnaJ 2; TrEMBL-Plants: tr|A0A0D2PQJ2|A0A0D2PQJ2_GOSRA Uncharacterized protein; Found in the gene: LotjaGi2g1v0193500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:62598955..62600224) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTTGGAAGGGCACCGAAGAAAAGCGAAGAAAAGCGATAGCACTAGGTACTATGAGATCCTCTGTGTTCCGAAGAATG CTTCTCAGGATGATTTGAAGAAGGCGTATAAGAAAGCTGCCATCAAGAATCACCCTGATAAGGGTGGTGATCCTAAAACG TTTAAGGAGCTGGCACAAGCTTATGAGGTTTTGAGTAACCCTGAGAAGCGTGAGATATATGATCAGTATGGTGAAGATGC GCTTAAGGAAGGAATGGGTGGTGGCGGCGGTGGCCATGACCCATTTGATATCTTCCAGTCGTTCTTTGGTGGAGGTGGAG GCCCATTCTCCGGTGGTAGCAGTAGAGGACGGAGGCAGAGACGGGGAGAAGATGTGGTTCACCCTCTGAAGGTCTCTTTG GAGGACCTTTACAGCGGAACAGCTAAGAAGCTTTCACTCTCAAGGAATGTGTTGTGCTCCAAGTGCAATGGGAAAGGATC AAAGTCTGGGGCTTCGATGAAGTGTGCTGGTTGCCAGGGTACTGGTATGAAGGTGTCCATTAGGCACCTGGGTCCATCTA TGATTCAGCAAATGCAACATCCTTGCAATGAATGTAAGGGAACTGGAGAGACAATCAATGACAGAGATCGATGCCCACAG TGCAAGGGAGAGAAGGTTGTCCAAGAGAAGAAAGTGCTTGAAGTTATTGTGGAGAAGGGAATGCAGAATGGACAGAAGAT TACATTCCCTGGCGAAGCTGATGAAGCGCCGGATACCGTCACTGGGGATATTGTCTTTGTCCTACAACAGAAGGAACATC CCAAGTTCAAAATAAAGTCTGAAGATCTTTTTGTTGAGCACACTTTGTCCCTAACTGAGGCTCTATGTGGCTTCCAGTTT GTGCTTACTCACTTGGATGGAAGGAAACTCCTTATCAAATCAAACCCTGGGGAAGTTGTTAAGCCTGATTCATACAAGGC TACTAACGATGAGGGGATGCCGGTGTATCAAAGGCCCTTCATGAAGGGGAAGCTTTACATTCACTTCACTGTGGAATTCC CTGAATCTCTGAGTGCTGAGCAGGTTAAGGCTCTAGAGGCTGTTCTGCCACCAAAGCCTTCATCACAGTTGACAGACATG GAGCTGGACGAGTGTGAAGAGACCACACTTCATGATGTCAACATAGAAGAAGAGACAAGGAGGAGACAGCAAGCTCAGCA GGAAGCATATGATGAGGATGGCGACATGCACGTTGGTGGTGCTCAAAGAGTACAGTGCGCCCAGTGTTGA
CDS sequence (LotjaGi2g1v0193500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGGTGGCGGCGGTGGCCATGACCCATTTGATATCTTCCAGTCGTTCTTTGGTGGAGGTGGAGGCCCATTCTCCGG TGGTAGCAGTAGAGGACGGAGGCAGAGACGGGGAGAAGATGTGGTTCACCCTCTGAAGGTCTCTTTGGAGGACCTTTACA GCGGAACAGCTAAGAAGCTTTCACTCTCAAGGAATGTGTTGTGCTCCAAGTGCAATGGGAAAGGATCAAAGTCTGGGGCT TCGATGAAGTGTGCTGGTTGCCAGGGTACTGGTATGAAGGTGTCCATTAGGCACCTGGGTCCATCTATGATTCAGCAAAT GCAACATCCTTGCAATGAATGTAAGGGAACTGGAGAGACAATCAATGACAGAGATCGATGCCCACAGTGCAAGGGAGAGA AGGTTGTCCAAGAGAAGAAAGTGCTTGAAGTTATTGTGGAGAAGGGAATGCAGAATGGACAGAAGATTACATTCCCTGGC GAAGCTGATGAAGCGCCGGATACCGTCACTGGGGATATTGTCTTTGTCCTACAACAGAAGGAACATCCCAAGTTCAAAAT AAAGTCTGAAGATCTTTTTGTTGAGCACACTTTGTCCCTAACTGAGGCTCTATGTGGCTTCCAGTTTGTGCTTACTCACT TGGATGGAAGGAAACTCCTTATCAAATCAAACCCTGGGGAAGTTGTTAAGCCTGATTCATACAAGGCTACTAACGATGAG GGGATGCCGGTGTATCAAAGGCCCTTCATGAAGGGGAAGCTTTACATTCACTTCACTGTGGAATTCCCTGAATCTCTGAG TGCTGAGCAGGTTAAGGCTCTAGAGGCTGTTCTGCCACCAAAGCCTTCATCACAGTTGACAGACATGGAGCTGGACGAGT GTGAAGAGACCACACTTCATGATGTCAACATAGAAGAAGAGACAAGGAGGAGACAGCAAGCTCAGCAGGAAGCATATGAT GAGGATGGCGACATGCACGTTGGTGGTGCTCAAAGAGTACAGTGCGCCCAGTGTTGA
Protein sequence (LotjaGi2g1v0193500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGGGGGGHDPFDIFQSFFGGGGGPFSGGSSRGRRQRRGEDVVHPLKVSLEDLYSGTAKKLSLSRNVLCSKCNGKGSKSGA SMKCAGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDRDRCPQCKGEKVVQEKKVLEVIVEKGMQNGQKITFPG EADEAPDTVTGDIVFVLQQKEHPKFKIKSEDLFVEHTLSLTEALCGFQFVLTHLDGRKLLIKSNPGEVVKPDSYKATNDE GMPVYQRPFMKGKLYIHFTVEFPESLSAEQVKALEAVLPPKPSSQLTDMELDECEETTLHDVNIEEETRRRQQAQQEAYD EDGDMHVGGAQRVQCAQC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 337 | 337 | 3.4E-217 | – | |
| PANTHER | 1 | 337 | 337 | 3.4E-217 | – | |
| CDD | 39 | 266 | 228 | 7.12543E-42 | – | |
| SUPERFAMILY | 39 | 183 | 145 | 6.15E-17 | ||
| Pfam | 42 | 263 | 222 | 1.4E-38 | ||
| ProSiteProfiles | 55 | 139 | 85 | 24.31 | ||
| SUPERFAMILY | 65 | 137 | 73 | 2.22E-17 | ||
| CDD | 68 | 134 | 67 | 1.17333E-18 | ||
| Pfam | 68 | 134 | 67 | 3.8E-15 | ||
| Gene3D | 70 | 134 | 65 | 8.4E-22 | – | |
| Gene3D | 182 | 264 | 83 | 1.4E-23 | – | |
| SUPERFAMILY | 185 | 274 | 90 | 5.49E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Heat shock protein binding | Interacting selectively and non-covalently with a heat shock protein, any protein synthesized or activated in response to heat shock. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi2g1v0193500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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