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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0210500 |
| Transcript ID | LotjaGi2g1v0210500.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 2A regulatory subunit A; TAIR: AT3G25800.1 protein phosphatase 2A subunit A2; Swiss-Prot: sp|Q38950|2AAB_ARATH Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform; TrEMBL-Plants: tr|A0A0L9VHW8|A0A0L9VHW8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0210500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:65756425..65762988) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCCATGGTGGACCAACCTCTGTATCCGATTGCGGTTCTCATCGACGAGTTGAAGAACGAGGACATTCAGTTGAGGCT CAACTCGATTCGCAGGCTCTCCACCATCGCGCGTGCGCTTGGTGAGGAGAGGACACGGAAGGAGTTGATTCCGTTTCTCA GCGAGAACAACGACGATGACGATGAGGTGCTTCTCGCTATGGCGGAGGAATTGGGGGTTTTCATCCCCTACGTCGGCGGC GTCGAACACGCCAATGTTCTGCTTCCGCCGTTGGAAACTCTCTGCACCGTTGAGGAAACTTGCGTCAGGGATAAATCGGT GGAGTCATTGTGTCGAATTGGAGCTCAGATGAGAGAACAAGACTTGGTTGAACACTTCATCCCATTGGTTAAGGTAGTAA CATTGTTGCATTCAATAACCCTAAGCTTTGTGTGATTCGAATGGCGCGTGTTTGTTGTATTTATCAATTTGCTTTTGTTG TTGTGGTTTTGGATTTATAGAGGTTGGCAGCTGGGGAGTGGTTCACAGCGCGGGTTTCGTCGTGTGGTTTATTCCATATT GCTTACCCGAGTGCGCCCGAGGCACAGAAGGCGGAACTGAGAGCCATGTATGGTCAGCTGTGTCAAGATGATATGCCCAT GGTTAGGAGATCTGCTGCCACCAACCTGGGGAAATTCGCTGCCACTGTTGAAGCTGCGCACTTGAAATCCGACATCATGT CTGTGTTTGATGATCTCACACAGGATGGTATGTGAAAGTTGATATGACTGATTCCAGTACCCTATTGTGGATCTTTTAAA TAAAATTAGGCGGAGCGTGATTATAAACACAATAGTTTTAGTGGTTATAATAAGTTCAATAGTTTTGTTGTTTAGATAAG GTGAGGAGCCTAATATAGATAGCTGATATATTCGATGGCTGTGAATGATGTTCTAAAAAAAATCTGTCTCCTCTGATGTT TTATAAGAATCGTATTATGAGATTTTGTGTTTGTCCGTGATCACTGCAAGTAGGTTGGGAATTTGATCTATTTAAGTTCA GAAAACCAACAGGAAGGAAACCAGAAAAGAAAAAAGAGGATTGGAATCCCATGGAGATATTTATGGAATCTTAGATAAGT TCAACTAGGTCATGTATGGTGTGAATCTGGAGGTTACTTGTTAAAATACAACACCTAAAATATTCGAAATACTCAATTAT CAGCGTCTAATAGCCTTCATCAGTTCATACTTAAAATCTGTTAACCTTAGTTTCCTTAACATTACACTTTCGGTGGTTGG TTTTTCATTTCCGTGCAGACTTTGCCTGATGAACTGGTTTTATTGTTGATATTTTTTATGAAAGAAAGAATGCACATCTA TATAATTCCAGAGAGGCAAACAAGTGGAACTTTAACCATATGAAGGAAGTTCTCAAGTGGGCATTCACATACAGAATAAT TGATTAATAAAACAACATTCTTGTTGCTACAATTTTATAAAAAAGTTGATATTTCTATTTGATATTTTTAAGACAATGCA GCTTCAAAACCTTGACTTATTTTTGGCTCAGATGAAAGACTTAAGTTTCTTCTATTGATATAATTTCATTTTCTTGTTAG AAATTGAAGGCATTGTCAGTAGATTTGACTCACCTGTTTGATAAATGAATACAGTTTGAGTTTTTCATGCTGATTTTTAA ATAGTGTTATTATACTCTTTTTACATGACCTGATGGATGTAATATATTTTAACTAATAAATTGACTCTTGGTCCTGCAGA TCAAGATTCTGTTCGGCTTCTTGCTGTTGAGGGTTGTGCAGCTCTTGGAAAATTGTTGGAGCCTCAAGAATGTGTAGCAC ATATTCTTCCTGTCATAGTCAATTTTTCTCAGGTATATTGAACATTAGTAATTTTATGTGGGAAGATATTCATTTTGTAC CCTTTGGCTTGTTGATTTACTAACACTTAAAATTTACCAAAAATTGAAGTAAAACAACAATTTTGCTTAACATTCATAAG AGCTCCACGGTTTAACCACAGCACTTTCAAGTCTTCTTTGGTGTTAATATAGCTGTAGGTACCCTTTCTCATGAACATAT GCATGGGATTCTTATTTTTACATGCAGAGATATATCTTTCTTCTGTAGCCATTTTTTTGGCCAAGATAATGAAGGAATGT CTTGCCTGCTGCATTAGGGATTGAACTTTAGTTAACTATGATATGAGTATATCCATAGGCTAAGCCTATGGTTTGTTCTG GCCCTCCTAGGGATGTAGCACTGTACAAATTACTGTGCTTCCAGAATTTTGGAGTAACTATTTGTTTTGTTTCTCTGGAA AAATGCATATGTAAATTGTAAAATATGAATCAGCTTAATATTTATTTATTTATTTATTTTAATATGAAGAACACATAGAT AGAAAATGAACACTTGTACCGCATTTTTTTCTTGTTTTAGGTCTGGTAATATTGTTTCAAATATTGACTGCCAATATACG ACATAGTCACAAGATTCAGCAATCGTAGTATTTGGGTAGTAGAAAGCCAACTAGAGCATAGGCTAAATTTTGCATAGATA AGAATATTGTGATGGATGAGTGGACATGCAATAATAGGTAAGATTGTATTAGAGTGTGTGATGTAAGAGAAAATTGTGCC CAATGAGGGTATGAATGTTTTTATAGACAGTAAACTAGGCTAGTAGTGAAGTGTTGTGAAGGATAGTTTGAAGCACTTCA TTGCTCTCAAGCATATTAAGTTTGTGCTTAATATACTATTCTTGACATTCCTCCTCTAGTTGTATCATAGATATTAATCA TGCCTTCCTTTGTTAAATAGCTAATCCTACTTATATGAAGTGCCTTCTTGAAGATGTCCCAACCACATGTTCTTCAATTC TATCCTTACACATTCTATGAATATAGTAACTTAGTAAGTCCTTGCTAGATCTTTTCTCGGATGAAGTGGCAATTAGGCTC TGCAAAGTCTTGGTTTTGGACAAAACACTATGGTGTTATTTCATCTATACCAAAAGACTTTGTTGTTATTGTATGACATT GTGTCAAAGGGTTCTTTATATCTTCTTCATAGCTATGCATTTTGCACATGGTCTTGGGTGGTTTATTGTTCTTTGAACCA TACGCTTGTACAAGTACAACTTTTATTTAGCTATAAAGTAATATGTAAATGAGATATTGTTGGTGGAAGAATGATAAATC TAATTACTTCAGATTAAATGATAAATTAGGAAATGAAATTACATGGTCATGCTTGAGATAATCCTCACACCCCCACGGCC ACTACATATTAAGTTTTTTGACAGCTGCTTGGGTTTCCTAGTTGGCTTATGAGTAGCAACTGCACTCAGATTTATTCGAT AGTTGAATAATAGAATGAGTTTAAACCTTGGGTGCGGGTCTGTAGAAGGTGTTTCTCTTGGTTGTCAAGCATGCTTTCCA TGCTTATAGTCCCATCTCGCTTAATACTGGAAAACAAAAGAAAAGGTTTTATGCTGCTTGTGTTGTTTCCAAGATGATGT TCTACATGCTTTTTACATGAGTGCTAGCAAGTAGCAACACTCGCTCCAACTCTCTCCTTTCAATGCTCTCATTATTGGTT GAAATTTATGTGGGTCCCACTAAATTGGAAGTGGGACCCACATTTTAATTGACCCCACATGAATTTCAACCAATAAATGT GAGTGTTGGAAAGAGTTTTAAAGTGAGTGTTGTTAGCATTTTTCTAATTATATAGCTGATCACTTCTTGTTCAGGACAAG TCATGGCGTGTCCGTTACATGGTTGCCAATCAACTATATGAGCTATGTGAAGCTGTTGGTCCTGAACCCACCAGGTAACC TTTCCTACCTGGTAAATTATTGGTTTTATCATGACCTTCCTACGTGCTTTTTTCTGCTGATGCTATCTGAAAATCTGCTG TCAGTATGCATTTTTGAGTTAGTCGAAAAATTCTTGCTGCATGGTCAAATGTATAAAAGTTATATCTGCTTAATTTCTTC ATGATCCATGACATGATTTAAAATGCATTTTGTTTTCCAGATTCTAATTGTCTGTTTATGATGGTGGTGAATTGGTGTTT TGTAGGACGGAATTGGTTCCGGCATATGTTCGACTACTGCGTGATAATGAGGCTGAAGTAAGGATTGCTGCTGCTGGGAA AGTGACCAAGTTTTCCCGCATATTAAGTCCTGAACTTGCTATTGAGCATATTCTACCATGTGTGAAGGTATACATAACCA TAGAAACATAAGATTCTCACAGGTTAACAATTATGATACACAGTTTTGATGTTATTGTTAACTGACTGATCAAGTTTGCT TGCTATAGGAGTTGTCTGCAGATTCATCTCAACATGTTCGCTCTGCATTGGCTTCAGTTATAATGGGAATGGCACCAGTG TTAGGAAAGGTATGAAGCTCTATCTAAGCACATGAGTTGTACCGACACAAAACTGAGTTGATAATACTCAGTGGTCTCTA CTAACTTTTACATTCCATTAAGTAGAAATCAAAACTTTTCATCTCAGTGATCTCAGTCTCTTTTCAGAACCCCCTCCCTC CCTATTTTCATCACTTTCTCATTCATCTACTCGTCCAAGCACACTCTTGTTATGGTTTCTAGCACTCTATTACCGTGACC TCAAACTTTTGAAACTGTTCCACTTTAAATGTAACTCAAGTCTTTTTAAAAGGAGAGGATGCATTTGTCTTCTCACTTTT ACTATATTTTTGTGGTGGTTGCAGGATGCGACAATAGAGCAACTTCTCCCTATTTTCCTTTCTCTTTTGAAAGATGAGTT TCCTGATGTCAGGCTAAATATTATCAGCAAGCTTGATCAAGTGAACCAGGTTTGTTAATGGAAAATTGAATTATCTTTCA GATTGGAAATGCACATTTAAAATGTTATTACTTTTCATACATTCCCTGTATTCAAGCTTTGTTATGTACATGTTGATTGC AGGTTATTGGTATTGATCTGTTATCCCAGTCTCTGTTACCAGCTATTGTTGAGCTTGCTGAGGATAGGCATTGGAGAGTT CGACTTGCTATCATAGAATATATACCCTTATTAGCAAGTCAGTTGGGTGTAGGTTTTTTTGATGATAAGCTTGGAGCTCT CTGCATGCAATGGCTAAAGGACAAGGTTTGGGAAGCAACTAAACTTAATTTCCAATTTATTCTACTCGTCTTGTTTATGA AGTCCATTTTATTAAAACATTGAATTATTCAGAGGCTTGTTTTATGCTAAAGCTATTATTATTATTGTAATCGGACGCGT TCCCATTTTATTTGATATTTGGATATCTCTAATATGAGTGATATTCTTCTTCAAAATTAAATTTTTCAATGCTGTTTTTT TTTTATACTGTGGTGCCTCTTAGTACTTGGCTTTGACTGGGTGCTTATATCTGATATGCATTTGAAAATGTGGCTTTTTA GCTGATCTGGTGTAACAGATCTTCATTTTAGAATGCTAAAAGACCAAAATGAAATGTTAACCGGGGAGTTATTTTCTGTT TGATATGCAATACACAAAGTTATTAGTGATTTAGGCTGTCAAAGTACTCGGAAATAGCTCAAAGGGTAAATAAAGCTTAC AAGTCCTGTGTTTGATCAAAGATTTAAATTAACCTCTATTGACTCGGTCAATTATAAAAGTTTTAAAACTTTTCTAGTCA AGAAACTTGCTCAGCTTTAATTTCATTGCTCTTCTACTTTTACATTACTATTCCGAGTAAACATATTGACTTCCTCAATT GTATTTCTTATGGTTGTAGGTATACTCAATCCGTGATGCAGCTGCTAATAACGTGAAACGCTTAGCAGAAGAATTTGGAC CAGATTGGGCAATGCAGCACATTATTCCCCAGGTTTTTAGCTCATGTTTTGTTGATGTCCATCAGCTGTACATTTCACCT AAAACTATAGAAAATGATTCTAATACCAGTGATATCATAGAAAACCCTCTAAACCAATGCTTTGAAAATGTTGACTCGAA CTTGTGTAGCCTCTGTGAACAGTGAGCAAAAAGTTTGGGTTTCATGATACATTTTATAATTCTTAAAGAAAAATAAAGTA AGTATACAAAAATGATGTAAAGGTGTTGTAAGCTGCAAAAGCAGTTATTTAAGGGATGTTCTGAATTGAGGAAAGTGGCA TGAAGAAGTATCGACTTCAAGTTCTCTGAGAATTTTCTGATGTCTCAATTGACACTTATCTTATGATTGTATGGTTGTTC AAAATACGTCCTGAATGTTTTTGCTAAATACAATCACTGTGGTATTCAATTTATCTAAAATAATATCTTAAGCTTTTACA GGTTTTGGACATGATTAACGATCCACATTATCTGTATCGAATGACAATTCTACAAGCAATTTCTTTATTAGCTCCTGTTC TGGGCTCAGAGATTACTTCTTCAAAACTGCTCCCTCTGGTTGTAAATGCGTCTAAAGATAGGTAAAATTGCTTAGCCCCC TTCCTGTTACATGTCTTTATTTAAACTAGTGCTCATAGGTCATAGCATTGTTTTGCAGGGTCCCCAATATCAAATTCAAT GTAG
CDS sequence (LotjaGi2g1v0210500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCATGGTGGACCAACCTCTGTATCCGATTGCGGTTCTCATCGACGAGTTGAAGAACGAGGACATTCAGTTGAGGCT CAACTCGATTCGCAGGCTCTCCACCATCGCGCGTGCGCTTGGTGAGGAGAGGACACGGAAGGAGTTGATTCCGTTTCTCA GCGAGAACAACGACGATGACGATGAGGTGCTTCTCGCTATGGCGGAGGAATTGGGGGTTTTCATCCCCTACGTCGGCGGC GTCGAACACGCCAATGTTCTGCTTCCGCCGTTGGAAACTCTCTGCACCGTTGAGGAAACTTGCGTCAGGGATAAATCGGT GGAGTCATTGTGTCGAATTGGAGCTCAGATGAGAGAACAAGACTTGGTTGAACACTTCATCCCATTGGTTAAGAGGTTGG CAGCTGGGGAGTGGTTCACAGCGCGGGTTTCGTCGTGTGGTTTATTCCATATTGCTTACCCGAGTGCGCCCGAGGCACAG AAGGCGGAACTGAGAGCCATGTATGGTCAGCTGTGTCAAGATGATATGCCCATGGTTAGGAGATCTGCTGCCACCAACCT GGGGAAATTCGCTGCCACTGTTGAAGCTGCGCACTTGAAATCCGACATCATGTCTGTGTTTGATGATCTCACACAGGATG ATCAAGATTCTGTTCGGCTTCTTGCTGTTGAGGGTTGTGCAGCTCTTGGAAAATTGTTGGAGCCTCAAGAATGTGTAGCA CATATTCTTCCTGTCATAGTCAATTTTTCTCAGGACAAGTCATGGCGTGTCCGTTACATGGTTGCCAATCAACTATATGA GCTATGTGAAGCTGTTGGTCCTGAACCCACCAGGACGGAATTGGTTCCGGCATATGTTCGACTACTGCGTGATAATGAGG CTGAAGTAAGGATTGCTGCTGCTGGGAAAGTGACCAAGTTTTCCCGCATATTAAGTCCTGAACTTGCTATTGAGCATATT CTACCATGTGTGAAGGAGTTGTCTGCAGATTCATCTCAACATGTTCGCTCTGCATTGGCTTCAGTTATAATGGGAATGGC ACCAGTGTTAGGAAAGGATGCGACAATAGAGCAACTTCTCCCTATTTTCCTTTCTCTTTTGAAAGATGAGTTTCCTGATG TCAGGCTAAATATTATCAGCAAGCTTGATCAAGTGAACCAGGTTATTGGTATTGATCTGTTATCCCAGTCTCTGTTACCA GCTATTGTTGAGCTTGCTGAGGATAGGCATTGGAGAGTTCGACTTGCTATCATAGAATATATACCCTTATTAGCAAGTCA GTTGGGTGTAGGTTTTTTTGATGATAAGCTTGGAGCTCTCTGCATGCAATGGCTAAAGGACAAGGTATACTCAATCCGTG ATGCAGCTGCTAATAACGTGAAACGCTTAGCAGAAGAATTTGGACCAGATTGGGCAATGCAGCACATTATTCCCCAGGTT TTGGACATGATTAACGATCCACATTATCTGTATCGAATGACAATTCTACAAGCAATTTCTTTATTAGCTCCTGTTCTGGG CTCAGAGATTACTTCTTCAAAACTGCTCCCTCTGGTTGTAAATGCGTCTAAAGATAGGTCATAG
Protein sequence (LotjaGi2g1v0210500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAMVDQPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGG VEHANVLLPPLETLCTVEETCVRDKSVESLCRIGAQMREQDLVEHFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPEAQ KAELRAMYGQLCQDDMPMVRRSAATNLGKFAATVEAAHLKSDIMSVFDDLTQDDQDSVRLLAVEGCAALGKLLEPQECVA HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAAAGKVTKFSRILSPELAIEHI LPCVKELSADSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLP AIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPDWAMQHIIPQV LDMINDPHYLYRMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 526 | 526 | 0.0 | – | |
| PANTHER | 1 | 526 | 526 | 0.0 | – | |
| Gene3D | 2 | 527 | 526 | 1.1E-227 | ||
| SUPERFAMILY | 8 | 527 | 520 | 2.37E-91 | ||
| ProSiteProfiles | 10 | 48 | 39 | 9.899 | ||
| ProSiteProfiles | 164 | 202 | 39 | 9.0 | ||
| ProSiteProfiles | 203 | 241 | 39 | 9.477 | ||
| ProSiteProfiles | 242 | 280 | 39 | 13.693 | ||
| Pfam | 242 | 270 | 29 | 1.4E-4 | ||
| ProSiteProfiles | 281 | 319 | 39 | 13.243 | ||
| ProSiteProfiles | 320 | 358 | 39 | 11.922 | ||
| ProSiteProfiles | 359 | 397 | 39 | 12.765 | ||
| Pfam | 361 | 459 | 99 | 7.2E-11 | – | |
| ProSiteProfiles | 398 | 436 | 39 | 11.669 | ||
| ProSiteProfiles | 476 | 514 | 39 | 11.978 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0210500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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