Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0210500 |
| Transcript ID | LotjaGi2g1v0210500.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 2A regulatory subunit A; TAIR: AT3G25800.1 protein phosphatase 2A subunit A2; Swiss-Prot: sp|Q38950|2AAB_ARATH Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform; TrEMBL-Plants: tr|A0A0L9VHW8|A0A0L9VHW8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0210500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:65756431..65763590) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTGGACCAACCTCTGTATCCGATTGCGGTTCTCATCGACGAGTTGAAGAACGAGGACATTCAGTTGAGGCTCAACTC GATTCGCAGGCTCTCCACCATCGCGCGTGCGCTTGGTGAGGAGAGGACACGGAAGGAGTTGATTCCGTTTCTCAGCGAGA ACAACGACGATGACGATGAGGTGCTTCTCGCTATGGCGGAGGAATTGGGGGTTTTCATCCCCTACGTCGGCGGCGTCGAA CACGCCAATGTTCTGCTTCCGCCGTTGGAAACTCTCTGCACCGTTGAGGAAACTTGCGTCAGGGATAAATCGGTGGAGTC ATTGTGTCGAATTGGAGCTCAGATGAGAGAACAAGACTTGGTTGAACACTTCATCCCATTGGTTAAGGTAGTAACATTGT TGCATTCAATAACCCTAAGCTTTGTGTGATTCGAATGGCGCGTGTTTGTTGTATTTATCAATTTGCTTTTGTTGTTGTGG TTTTGGATTTATAGAGGTTGGCAGCTGGGGAGTGGTTCACAGCGCGGGTTTCGTCGTGTGGTTTATTCCATATTGCTTAC CCGAGTGCGCCCGAGGCACAGAAGGCGGAACTGAGAGCCATGTATGGTCAGCTGTGTCAAGATGATATGCCCATGGTTAG GAGATCTGCTGCCACCAACCTGGGGAAATTCGCTGCCACTGTTGAAGCTGCGCACTTGAAATCCGACATCATGTCTGTGT TTGATGATCTCACACAGGATGGTATGTGAAAGTTGATATGACTGATTCCAGTACCCTATTGTGGATCTTTTAAATAAAAT TAGGCGGAGCGTGATTATAAACACAATAGTTTTAGTGGTTATAATAAGTTCAATAGTTTTGTTGTTTAGATAAGGTGAGG AGCCTAATATAGATAGCTGATATATTCGATGGCTGTGAATGATGTTCTAAAAAAAATCTGTCTCCTCTGATGTTTTATAA GAATCGTATTATGAGATTTTGTGTTTGTCCGTGATCACTGCAAGTAGGTTGGGAATTTGATCTATTTAAGTTCAGAAAAC CAACAGGAAGGAAACCAGAAAAGAAAAAAGAGGATTGGAATCCCATGGAGATATTTATGGAATCTTAGATAAGTTCAACT AGGTCATGTATGGTGTGAATCTGGAGGTTACTTGTTAAAATACAACACCTAAAATATTCGAAATACTCAATTATCAGCGT CTAATAGCCTTCATCAGTTCATACTTAAAATCTGTTAACCTTAGTTTCCTTAACATTACACTTTCGGTGGTTGGTTTTTC ATTTCCGTGCAGACTTTGCCTGATGAACTGGTTTTATTGTTGATATTTTTTATGAAAGAAAGAATGCACATCTATATAAT TCCAGAGAGGCAAACAAGTGGAACTTTAACCATATGAAGGAAGTTCTCAAGTGGGCATTCACATACAGAATAATTGATTA ATAAAACAACATTCTTGTTGCTACAATTTTATAAAAAAGTTGATATTTCTATTTGATATTTTTAAGACAATGCAGCTTCA AAACCTTGACTTATTTTTGGCTCAGATGAAAGACTTAAGTTTCTTCTATTGATATAATTTCATTTTCTTGTTAGAAATTG AAGGCATTGTCAGTAGATTTGACTCACCTGTTTGATAAATGAATACAGTTTGAGTTTTTCATGCTGATTTTTAAATAGTG TTATTATACTCTTTTTACATGACCTGATGGATGTAATATATTTTAACTAATAAATTGACTCTTGGTCCTGCAGATCAAGA TTCTGTTCGGCTTCTTGCTGTTGAGGGTTGTGCAGCTCTTGGAAAATTGTTGGAGCCTCAAGAATGTGTAGCACATATTC TTCCTGTCATAGTCAATTTTTCTCAGGTATATTGAACATTAGTAATTTTATGTGGGAAGATATTCATTTTGTACCCTTTG GCTTGTTGATTTACTAACACTTAAAATTTACCAAAAATTGAAGTAAAACAACAATTTTGCTTAACATTCATAAGAGCTCC ACGGTTTAACCACAGCACTTTCAAGTCTTCTTTGGTGTTAATATAGCTGTAGGTACCCTTTCTCATGAACATATGCATGG GATTCTTATTTTTACATGCAGAGATATATCTTTCTTCTGTAGCCATTTTTTTGGCCAAGATAATGAAGGAATGTCTTGCC TGCTGCATTAGGGATTGAACTTTAGTTAACTATGATATGAGTATATCCATAGGCTAAGCCTATGGTTTGTTCTGGCCCTC CTAGGGATGTAGCACTGTACAAATTACTGTGCTTCCAGAATTTTGGAGTAACTATTTGTTTTGTTTCTCTGGAAAAATGC ATATGTAAATTGTAAAATATGAATCAGCTTAATATTTATTTATTTATTTATTTTAATATGAAGAACACATAGATAGAAAA TGAACACTTGTACCGCATTTTTTTCTTGTTTTAGGTCTGGTAATATTGTTTCAAATATTGACTGCCAATATACGACATAG TCACAAGATTCAGCAATCGTAGTATTTGGGTAGTAGAAAGCCAACTAGAGCATAGGCTAAATTTTGCATAGATAAGAATA TTGTGATGGATGAGTGGACATGCAATAATAGGTAAGATTGTATTAGAGTGTGTGATGTAAGAGAAAATTGTGCCCAATGA GGGTATGAATGTTTTTATAGACAGTAAACTAGGCTAGTAGTGAAGTGTTGTGAAGGATAGTTTGAAGCACTTCATTGCTC TCAAGCATATTAAGTTTGTGCTTAATATACTATTCTTGACATTCCTCCTCTAGTTGTATCATAGATATTAATCATGCCTT CCTTTGTTAAATAGCTAATCCTACTTATATGAAGTGCCTTCTTGAAGATGTCCCAACCACATGTTCTTCAATTCTATCCT TACACATTCTATGAATATAGTAACTTAGTAAGTCCTTGCTAGATCTTTTCTCGGATGAAGTGGCAATTAGGCTCTGCAAA GTCTTGGTTTTGGACAAAACACTATGGTGTTATTTCATCTATACCAAAAGACTTTGTTGTTATTGTATGACATTGTGTCA AAGGGTTCTTTATATCTTCTTCATAGCTATGCATTTTGCACATGGTCTTGGGTGGTTTATTGTTCTTTGAACCATACGCT TGTACAAGTACAACTTTTATTTAGCTATAAAGTAATATGTAAATGAGATATTGTTGGTGGAAGAATGATAAATCTAATTA CTTCAGATTAAATGATAAATTAGGAAATGAAATTACATGGTCATGCTTGAGATAATCCTCACACCCCCACGGCCACTACA TATTAAGTTTTTTGACAGCTGCTTGGGTTTCCTAGTTGGCTTATGAGTAGCAACTGCACTCAGATTTATTCGATAGTTGA ATAATAGAATGAGTTTAAACCTTGGGTGCGGGTCTGTAGAAGGTGTTTCTCTTGGTTGTCAAGCATGCTTTCCATGCTTA TAGTCCCATCTCGCTTAATACTGGAAAACAAAAGAAAAGGTTTTATGCTGCTTGTGTTGTTTCCAAGATGATGTTCTACA TGCTTTTTACATGAGTGCTAGCAAGTAGCAACACTCGCTCCAACTCTCTCCTTTCAATGCTCTCATTATTGGTTGAAATT TATGTGGGTCCCACTAAATTGGAAGTGGGACCCACATTTTAATTGACCCCACATGAATTTCAACCAATAAATGTGAGTGT TGGAAAGAGTTTTAAAGTGAGTGTTGTTAGCATTTTTCTAATTATATAGCTGATCACTTCTTGTTCAGGACAAGTCATGG CGTGTCCGTTACATGGTTGCCAATCAACTATATGAGCTATGTGAAGCTGTTGGTCCTGAACCCACCAGGTAACCTTTCCT ACCTGGTAAATTATTGGTTTTATCATGACCTTCCTACGTGCTTTTTTCTGCTGATGCTATCTGAAAATCTGCTGTCAGTA TGCATTTTTGAGTTAGTCGAAAAATTCTTGCTGCATGGTCAAATGTATAAAAGTTATATCTGCTTAATTTCTTCATGATC CATGACATGATTTAAAATGCATTTTGTTTTCCAGATTCTAATTGTCTGTTTATGATGGTGGTGAATTGGTGTTTTGTAGG ACGGAATTGGTTCCGGCATATGTTCGACTACTGCGTGATAATGAGGCTGAAGTAAGGATTGCTGCTGCTGGGAAAGTGAC CAAGTTTTCCCGCATATTAAGTCCTGAACTTGCTATTGAGCATATTCTACCATGTGTGAAGGTATACATAACCATAGAAA CATAAGATTCTCACAGGTTAACAATTATGATACACAGTTTTGATGTTATTGTTAACTGACTGATCAAGTTTGCTTGCTAT AGGAGTTGTCTGCAGATTCATCTCAACATGTTCGCTCTGCATTGGCTTCAGTTATAATGGGAATGGCACCAGTGTTAGGA AAGGTATGAAGCTCTATCTAAGCACATGAGTTGTACCGACACAAAACTGAGTTGATAATACTCAGTGGTCTCTACTAACT TTTACATTCCATTAAGTAGAAATCAAAACTTTTCATCTCAGTGATCTCAGTCTCTTTTCAGAACCCCCTCCCTCCCTATT TTCATCACTTTCTCATTCATCTACTCGTCCAAGCACACTCTTGTTATGGTTTCTAGCACTCTATTACCGTGACCTCAAAC TTTTGAAACTGTTCCACTTTAAATGTAACTCAAGTCTTTTTAAAAGGAGAGGATGCATTTGTCTTCTCACTTTTACTATA TTTTTGTGGTGGTTGCAGGATGCGACAATAGAGCAACTTCTCCCTATTTTCCTTTCTCTTTTGAAAGATGAGTTTCCTGA TGTCAGGCTAAATATTATCAGCAAGCTTGATCAAGTGAACCAGGTTTGTTAATGGAAAATTGAATTATCTTTCAGATTGG AAATGCACATTTAAAATGTTATTACTTTTCATACATTCCCTGTATTCAAGCTTTGTTATGTACATGTTGATTGCAGGTTA TTGGTATTGATCTGTTATCCCAGTCTCTGTTACCAGCTATTGTTGAGCTTGCTGAGGATAGGCATTGGAGAGTTCGACTT GCTATCATAGAATATATACCCTTATTAGCAAGTCAGTTGGGTGTAGGTTTTTTTGATGATAAGCTTGGAGCTCTCTGCAT GCAATGGCTAAAGGACAAGGTTTGGGAAGCAACTAAACTTAATTTCCAATTTATTCTACTCGTCTTGTTTATGAAGTCCA TTTTATTAAAACATTGAATTATTCAGAGGCTTGTTTTATGCTAAAGCTATTATTATTATTGTAATCGGACGCGTTCCCAT TTTATTTGATATTTGGATATCTCTAATATGAGTGATATTCTTCTTCAAAATTAAATTTTTCAATGCTGTTTTTTTTTTAT ACTGTGGTGCCTCTTAGTACTTGGCTTTGACTGGGTGCTTATATCTGATATGCATTTGAAAATGTGGCTTTTTAGCTGAT CTGGTGTAACAGATCTTCATTTTAGAATGCTAAAAGACCAAAATGAAATGTTAACCGGGGAGTTATTTTCTGTTTGATAT GCAATACACAAAGTTATTAGTGATTTAGGCTGTCAAAGTACTCGGAAATAGCTCAAAGGGTAAATAAAGCTTACAAGTCC TGTGTTTGATCAAAGATTTAAATTAACCTCTATTGACTCGGTCAATTATAAAAGTTTTAAAACTTTTCTAGTCAAGAAAC TTGCTCAGCTTTAATTTCATTGCTCTTCTACTTTTACATTACTATTCCGAGTAAACATATTGACTTCCTCAATTGTATTT CTTATGGTTGTAGGTATACTCAATCCGTGATGCAGCTGCTAATAACGTGAAACGCTTAGCAGAAGAATTTGGACCAGATT GGGCAATGCAGCACATTATTCCCCAGGTTTTTAGCTCATGTTTTGTTGATGTCCATCAGCTGTACATTTCACCTAAAACT ATAGAAAATGATTCTAATACCAGTGATATCATAGAAAACCCTCTAAACCAATGCTTTGAAAATGTTGACTCGAACTTGTG TAGCCTCTGTGAACAGTGAGCAAAAAGTTTGGGTTTCATGATACATTTTATAATTCTTAAAGAAAAATAAAGTAAGTATA CAAAAATGATGTAAAGGTGTTGTAAGCTGCAAAAGCAGTTATTTAAGGGATGTTCTGAATTGAGGAAAGTGGCATGAAGA AGTATCGACTTCAAGTTCTCTGAGAATTTTCTGATGTCTCAATTGACACTTATCTTATGATTGTATGGTTGTTCAAAATA CGTCCTGAATGTTTTTGCTAAATACAATCACTGTGGTATTCAATTTATCTAAAATAATATCTTAAGCTTTTACAGGTTTT GGACATGATTAACGATCCACATTATCTGTATCGAATGACAATTCTACAAGCAATTTCTTTATTAGCTCCTGTTCTGGGCT CAGAGATTACTTCTTCAAAACTGCTCCCTCTGGTTGTAAATGCGTCTAAAGATAGGTAAAATTGCTTAGCCCCCTTCCTG TTACATGTCTTTATTTAAACTAGTGCTCATAGGTCATAGCATTGTTTTGCAGGGTCCCCAATATCAAATTCAATGTAGCA AAAGTTTTGCAATCTCTCATTCCAATTGTTGAGGAATCTGTAAGTAGCTTCCATCTAAGATTTCATCTTTAATACACTTC CCCCTGTTGCTCCGATTATAATAAATAGTATATTGATTTCTAGAATGGTATCTTTATAATAATTCAGATTAGCGGTACAA TGGTATTAATTTGTCCTAGAAATATTGAGATTTTGATTGTTGTGGACTGGAATTCATTTTATGCTACTTTGAATTAGTTT TTTGTTGAATTCTTTTCTCGAAAAGAAATTTCAGACTTATTACTTGCTGAACTAGCTTAGCTTAACAAAACCAGTTAGCT AAAAGCTAAGATGGCTGTTTGGTAATGACATCACTTTGGAAAACTTTATCCTAGTTGTTTTCACCATACTTTCGTTGGGT TTTCAATAAAGCTTGTAGTAGTAAGGAATAATTTGACAAACATTATTATTTGATAACTAATACTCATTTGAACAATGAAG GTTGTTGAGAATACCATCCGTCCCTGTCTGGTTGAGCTAAGTGAGGATCCAGATGTTGATGTTAGGTTTTTCGCCTCTCA AGCACTACAGTCTAGTGATCAAGTCAAGATGTCCAGCTAG
CDS sequence (LotjaGi2g1v0210500.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGACCAACCTCTGTATCCGATTGCGGTTCTCATCGACGAGTTGAAGAACGAGGACATTCAGTTGAGGCTCAACTC GATTCGCAGGCTCTCCACCATCGCGCGTGCGCTTGGTGAGGAGAGGACACGGAAGGAGTTGATTCCGTTTCTCAGCGAGA ACAACGACGATGACGATGAGGTGCTTCTCGCTATGGCGGAGGAATTGGGGGTTTTCATCCCCTACGTCGGCGGCGTCGAA CACGCCAATGTTCTGCTTCCGCCGTTGGAAACTCTCTGCACCGTTGAGGAAACTTGCGTCAGGGATAAATCGGTGGAGTC ATTGTGTCGAATTGGAGCTCAGATGAGAGAACAAGACTTGGTTGAACACTTCATCCCATTGGTTAAGAGGTTGGCAGCTG GGGAGTGGTTCACAGCGCGGGTTTCGTCGTGTGGTTTATTCCATATTGCTTACCCGAGTGCGCCCGAGGCACAGAAGGCG GAACTGAGAGCCATGTATGGTCAGCTGTGTCAAGATGATATGCCCATGGTTAGGAGATCTGCTGCCACCAACCTGGGGAA ATTCGCTGCCACTGTTGAAGCTGCGCACTTGAAATCCGACATCATGTCTGTGTTTGATGATCTCACACAGGATGATCAAG ATTCTGTTCGGCTTCTTGCTGTTGAGGGTTGTGCAGCTCTTGGAAAATTGTTGGAGCCTCAAGAATGTGTAGCACATATT CTTCCTGTCATAGTCAATTTTTCTCAGGACAAGTCATGGCGTGTCCGTTACATGGTTGCCAATCAACTATATGAGCTATG TGAAGCTGTTGGTCCTGAACCCACCAGGACGGAATTGGTTCCGGCATATGTTCGACTACTGCGTGATAATGAGGCTGAAG TAAGGATTGCTGCTGCTGGGAAAGTGACCAAGTTTTCCCGCATATTAAGTCCTGAACTTGCTATTGAGCATATTCTACCA TGTGTGAAGGAGTTGTCTGCAGATTCATCTCAACATGTTCGCTCTGCATTGGCTTCAGTTATAATGGGAATGGCACCAGT GTTAGGAAAGGATGCGACAATAGAGCAACTTCTCCCTATTTTCCTTTCTCTTTTGAAAGATGAGTTTCCTGATGTCAGGC TAAATATTATCAGCAAGCTTGATCAAGTGAACCAGGTTATTGGTATTGATCTGTTATCCCAGTCTCTGTTACCAGCTATT GTTGAGCTTGCTGAGGATAGGCATTGGAGAGTTCGACTTGCTATCATAGAATATATACCCTTATTAGCAAGTCAGTTGGG TGTAGGTTTTTTTGATGATAAGCTTGGAGCTCTCTGCATGCAATGGCTAAAGGACAAGGCTGTCAAAGTACTCGGAAATA GCTCAGTATACTCAATCCGTGATGCAGCTGCTAATAACGTGAAACGCTTAGCAGAAGAATTTGGACCAGATTGGGCAATG CAGCACATTATTCCCCAGGTTTTGGACATGATTAACGATCCACATTATCTGTATCGAATGACAATTCTACAAGCAATTTC TTTATTAGCTCCTGTTCTGGGCTCAGAGATTACTTCTTCAAAACTGCTCCCTCTGGTTGTAAATGCGTCTAAAGATAGGG TCCCCAATATCAAATTCAATGTAGCAAAAGTTTTGCAATCTCTCATTCCAATTGTTGAGGAATCTGTTGTTGAGAATACC ATCCGTCCCTGTCTGGTTGAGCTAAGTGAGGATCCAGATGTTGATGTTAGGTTTTTCGCCTCTCAAGCACTACAGTCTAG TGATCAAGTCAAGATGTCCAGCTAG
Protein sequence (LotjaGi2g1v0210500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVDQPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVE HANVLLPPLETLCTVEETCVRDKSVESLCRIGAQMREQDLVEHFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPEAQKA ELRAMYGQLCQDDMPMVRRSAATNLGKFAATVEAAHLKSDIMSVFDDLTQDDQDSVRLLAVEGCAALGKLLEPQECVAHI LPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAAAGKVTKFSRILSPELAIEHILP CVKELSADSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAI VELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLKDKAVKVLGNSSVYSIRDAAANNVKRLAEEFGPDWAM QHIIPQVLDMINDPHYLYRMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIVEESVVENT IRPCLVELSEDPDVDVRFFASQALQSSDQVKMSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 594 | 593 | 0.0 | – | |
| PANTHER | 2 | 594 | 593 | 0.0 | – | |
| Gene3D | 2 | 588 | 587 | 1.7E-247 | ||
| SUPERFAMILY | 6 | 586 | 581 | 2.13E-101 | ||
| ProSiteProfiles | 8 | 46 | 39 | 9.899 | ||
| ProSiteProfiles | 162 | 200 | 39 | 9.0 | ||
| ProSiteProfiles | 201 | 239 | 39 | 9.477 | ||
| Pfam | 240 | 268 | 29 | 1.6E-4 | ||
| ProSiteProfiles | 240 | 278 | 39 | 13.693 | ||
| ProSiteProfiles | 279 | 317 | 39 | 13.243 | ||
| ProSiteProfiles | 318 | 356 | 39 | 11.922 | ||
| ProSiteProfiles | 357 | 395 | 39 | 12.765 | ||
| Pfam | 359 | 446 | 88 | 3.5E-8 | – | |
| ProSiteProfiles | 396 | 434 | 39 | 11.669 | ||
| ProSiteProfiles | 483 | 521 | 39 | 11.978 | ||
| ProSiteProfiles | 522 | 560 | 39 | 11.304 | ||
| ProSiteProfiles | 561 | 594 | 34 | 9.196 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0210500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…