Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0238100 |
| Transcript ID | LotjaGi2g1v0238100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acetolactate synthase; TAIR: AT5G17380.1 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; Swiss-Prot: sp|Q9LF46|HACL_ARATH 2-hydroxyacyl-CoA lyase; TrEMBL-Plants: tr|A0A151TX24|A0A151TX24_CAJCA 2-hydroxyacyl-CoA lyase 1; Found in the gene: LotjaGi2g1v0238100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:69887445..69892017) extracted from Lotus japonicus Gifu genome v1.2.
ATTATTTCTCTGTTCCATGTCAGCCTTGTCATTGAATTTTGATTCATCTCAAACTCCATAATAAAAAACAATTAAAAGCT CAATGGAATTCCATAAGTTGTCCACAAATTAGAAGATAGAGATACCCTAGTAGGAATGTTAGACATCTCTTTTTTTAAGC CTCTCCTTCTCTCTTATGTAGATTTTCATGCCATCAACCTTGATAATATTCTAGAAACATGAATATAACCTGGACTCAAG TAGTTAATCAAACATATAATCCTCATATACTCAACAAATTCAAAAGGTAAATCTTGTTCAACAAATTTAAGTGAGGAGGG TTGGTGATGGCGAGCTTCTTCAACCTGATCTTCAATCTACTGGGGAAGGCGACGACTCTGAGTCCGAATGAAGACACGTG AAGATCAAGATCAATTTGTAATGATGAAGCTAAATATCAATTTTGCCTCTTCTAAGGACTAATTCGTCATTTCCAAAAAA CACAGCACCGGGTATAAATTAACATTCAAAACCACACTTGATTTAGCAGTGTGTGTTACTTAAAACTGTTACGTCAATCA ATTTTCCATTCTCAGTCAAATTCAATGGGGGAAGTTACCCAAATCGACGGCAACACCCTCGCCGCCAAATCCCTAGCCAG ATTCGGCGTCGAACACATGTTCGGCGTCGTCGGAATCCCCGTAACCTCCCTCGCCACCCGCGCCGTCTCCCTCGGAATCC GCTTCCTCGCCTTCCACAACGAGCAGTCCGCTGGCTACGCCGCCTCCGCTTACGGCTACCTTACCGCCCGCCCCGGCGTC TACCTCACTGTTTCCGGTCCCGGCTGCGTCCACGGCCTCGCTGGCCTCTCCAACGCCATGGCTAACGCCTGGCCTGCTAT CATGATCTCCGGCTCCTGCGATCAGGCTGATGCTGGCCGCGGTGACTTCCAGGAGTTGGACCAGATCGAAGCGGTGAAGC CATTCTCTAAGCTCTCCGTGAAGGCCACTGATATCTCTCAAATCCCCGGCTGCGTTGCGCGGGTGCTTGATCGGGCTGTG TCGGGTCGACCCGGTGGGTGCTACTTTGATCTTCCCACCGACGTGTTGCACCAGAAGGTGTCGGAGTCTGAAGCGGAGAG GCTCTTGGTTGAGGCTGAGAAGGAGCGCCAAAACACTCAGGTAGTAAACTGTATGCTTTGTTAGCATATATTACCAGTTT GGATTGATTTCTAGCTTTTAAGAATTTTTCAATTGAGATGAGTATTTAGTTGCAAACTAAGGAAATGGGCTTTGATTTTA AGTGTTCATGAGGAAGTTAGATGGGGGAGTTTCTAAAAATGTTTGAAGCAGGGTTGTTAATGGCAGATAGCGCAGTGTCG CGGCAAGCCCAAAAAACGCTATTTCAAGGGCTATTGCGGCGCTATAGCGGTGAATAATGGAGTAGCGTTGAACCCCCAGA GCGCTACGCTATAGCGCGCTATTAACAAGCCGGGTTTGAAGGTGTAGAAGCTGTTATTTAAAATGCTCATAGTTATTGCA AAATTATTTGGAGTTTTCTTTTAGTATAAGGTTTTGCTGAGAAGTAGTTGATTCAAATTGGATAATGTTATTGTGTGTTA TATGCTAACTTGTTTGTCAAATGTTATCTCAGGCTCATGGGTCTGGTGTTGAGAATTCTAAGATTGAGGAAGCTGTTTCG CTGTTGAGGCATGCGGAGAGGCCGTTGGTTGTGTTTGGAAAAGGAGCTGCGTATGCTAGGGCTGAAGGCGCTATGAGAAA ATTGGTGGAATCCACTGGGATACCGTTTCTTCCTACTCCCATGGGAAAAGGGTTGTTGCCGGATACTCATCCGCTTGCTG CCTCTGCTGCCAGGTCTCTTGCGATTGGGAAATGTGATGTTGCACTCGTAGTTGGGGCCAGGCTCAATTGGTTGCTGCAT TTCGGGGAACCTCCCAAGTGGTCTAAGGATGTCAAGTTTATCTTGGTGGATGTCAGTCCCGAAGAAATTGAGCTCAGGAA ACCGCATTTGGGTTTGGTAGGAGATGCCAAAAACGTTCTGGAGATTCTCAATAAAGAGATTAAGGATGATCCCTTTTGCT TGGGGAGCACTCATCCCTGGGTGCAAGCTATAACCAATAAGGCCAAGGACAATGTGATCAAGATGGAGACCCAGCTAGCC AAGGATGTTGTACCCTTTAACTTCCTCACTCCAATGAGAATAATAAGAGATGCAATTATAGGTTTGGGAAGCCCTGCTCC TGTCATAGTTTCTGAAGGTGCAAACACCATGGATGTGGGTCGATCTGTGTTGATTCAGACAGAGCCCAGAACGAGGTTAG ATGCAGGAACATGGGGGACAATGGGTGTTGGTCTCGGTTATTGCATTGCGGCAGCAGTGGCTTCTCCAGGTCGCCTTGTA GTTGCAGTTGAGGGGGATTCTGGATTTGGATTCAGTGCTATAGAAGTCGAGGTACGTGCCTATGCTTATCCACTTTACTG CTCTTCTTCTAAACATTCTAATCTAAACTCTCACTCTTTGTGTGTGTGTGTGTGGCCATGACATTGATTTATTTTCCATT TATTGTCCTATTCAAACTGATTCTGTTCCTGTCTCTAGTCCCACAATTCTCTAGACTCTTAAGAGCTGATGCCATTCAAA CATAGGAGGATGTATGAATGTATCCTTAGTGGATGCCCATCACCTGTTTTAGTAATATAATTTTCCTTCTATCCATAAAA TTGGTCAATCTGAGAGTGTAGCAGGGAAGTTGACTTCCTTATATTTGGAACTGGGATCTTCCTTTCAATGTTTTTGTTAT TTTTTTGGGGTGGAATTTTTTGGGCTCTCTTTGCACATTTCTAGTAGTCCTATATTCTGTTATGTTATGATGTAGCATTC AATCTCTTTTTCTTCTTTTTGTCCCCCTTTATGTTTTTTTTATCTCACTCTTCTGGTAGTAGCTGTAGCTTGATCCCTGT TGTGGGGGAGCAGGGGCATCTCTATCAGTATCAACTATATATTCTTCATTTTATGACCTAAAATGTCATACAAAGTTGCA TGACCATTATTTTAATCTCCATTAGGCTTAGACATTCCTCTATGTTGTCTTGTGAGGGTTTTTGTTGGAATAAATTTTGG GCTGGCGTTCCTGATAGTGAAAGAAATTTGTTACTCGTGGCAAGTAAAAATGCCTTAATTGTCCTTGAAATTGGAAAAAG TGGTTCAGCACGTATTTTGTTGAACAGTAGTATCTTCTTAATCCCCATTTTCTATGTAGCTGATAAGTTAAAATGCAAAT GGCTGAGCAACATAAGATGCAGATATGAATAGTTAGATTTTGCCTTCTTATGAAAACTTCTAAACAAGTTTCTACTGTTC TAGGTCGTTGTTATTATGGAGTTTTGCCCTGCCATTCTGGGTCTTACCTTTTCCCCAAGACTTCAGAAGTTTTATATCTC TTGTTCTGCCTGAAACTGGGAAAACAAATATCTTCAAGTTTCAAAAATAGTCTTTGCTTGAGGCTTTTTGCTACTATAAT CCCCAATGGATTTTGTTGTTTAAAGAACCTTGTGAAGTTCAATTTTGTGAAAAATACTTGTGCTCAAGTTTATAAAATTA ATGTTATTACTGTATGTAAATTCTATTGATCGATGTGATCATATGGGGGCATATGCTTTTGCTTTTATTTGGTACAGCTC TTGCAATTATTTTTTGAATGCAAGCATGACCTGTGATGCTTTATCTTTATCCAGACATTGGTTCGGTACCAGTTACCTGT GGTGGTGATTGTTTTCAACAATGGTGGTGTATATGGTGGCGACCGCAGAACCCCAGAAGAGATAAATGGACCTCACAAAG ATGATCCGGCACCTACATCCTTTGTCCCAAATGCAGGTTACCATGCTTTGATTGAAGCTTTTGGTGGAAAAGGCTATCTT GTTGGGACACCAGATGAACTCAAGTCTGCTCTTTCAGAATCCTTCTCTGCTAGGAAACCAGCTGTAATAAACGTTATCAT TGATCCCTATGCCGGTTCAGAGAGTGGGAGGCTGCAACACAAGAATTGATTTACCTTAATTGCCAAACGCTCTACTGCAT TCCCCCACTTTATTTAACTGTGTTTTACTTTTTGATTTTCAATAACACTAAAATTGTTCTCCAGTGGTCATTAATGCTTG AGTTTTCTGGAACTGGGTTAGTGTTGAGAGGTTTGGATAGTTTGTATGAAGATCAAACCCAATTGCTATCACCGTATATC AAAAAAAAAAAAATGATGGACCATATCCATAAGGTATATAAACTGCACTGTTGCTTGTAAACACACTACATTAAACACCT CAACAATCTTGACTATCTATTTCATTTTTCTCACTACTTCTCTTTTCCAATTCATGTCATATCTTACATCTTTCACTTAT CTTTGAACTCTTCTCATCTCTCATTTTATTTAGGGTGTATACATCTCAATGAGAAGATGATTAGGGTGTATCGTACTAGA GTGAGTAGATGATTAGAGAAACTTTTCAAAGTAATGTTATCTTTAAAGTTTAAAATGTATCATAATATTATTCTAATAAA ATTTGAAGTTAAA
CDS sequence (LotjaGi2g1v0238100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGGAAGTTACCCAAATCGACGGCAACACCCTCGCCGCCAAATCCCTAGCCAGATTCGGCGTCGAACACATGTTCGG CGTCGTCGGAATCCCCGTAACCTCCCTCGCCACCCGCGCCGTCTCCCTCGGAATCCGCTTCCTCGCCTTCCACAACGAGC AGTCCGCTGGCTACGCCGCCTCCGCTTACGGCTACCTTACCGCCCGCCCCGGCGTCTACCTCACTGTTTCCGGTCCCGGC TGCGTCCACGGCCTCGCTGGCCTCTCCAACGCCATGGCTAACGCCTGGCCTGCTATCATGATCTCCGGCTCCTGCGATCA GGCTGATGCTGGCCGCGGTGACTTCCAGGAGTTGGACCAGATCGAAGCGGTGAAGCCATTCTCTAAGCTCTCCGTGAAGG CCACTGATATCTCTCAAATCCCCGGCTGCGTTGCGCGGGTGCTTGATCGGGCTGTGTCGGGTCGACCCGGTGGGTGCTAC TTTGATCTTCCCACCGACGTGTTGCACCAGAAGGTGTCGGAGTCTGAAGCGGAGAGGCTCTTGGTTGAGGCTGAGAAGGA GCGCCAAAACACTCAGGCTCATGGGTCTGGTGTTGAGAATTCTAAGATTGAGGAAGCTGTTTCGCTGTTGAGGCATGCGG AGAGGCCGTTGGTTGTGTTTGGAAAAGGAGCTGCGTATGCTAGGGCTGAAGGCGCTATGAGAAAATTGGTGGAATCCACT GGGATACCGTTTCTTCCTACTCCCATGGGAAAAGGGTTGTTGCCGGATACTCATCCGCTTGCTGCCTCTGCTGCCAGGTC TCTTGCGATTGGGAAATGTGATGTTGCACTCGTAGTTGGGGCCAGGCTCAATTGGTTGCTGCATTTCGGGGAACCTCCCA AGTGGTCTAAGGATGTCAAGTTTATCTTGGTGGATGTCAGTCCCGAAGAAATTGAGCTCAGGAAACCGCATTTGGGTTTG GTAGGAGATGCCAAAAACGTTCTGGAGATTCTCAATAAAGAGATTAAGGATGATCCCTTTTGCTTGGGGAGCACTCATCC CTGGGTGCAAGCTATAACCAATAAGGCCAAGGACAATGTGATCAAGATGGAGACCCAGCTAGCCAAGGATGTTGTACCCT TTAACTTCCTCACTCCAATGAGAATAATAAGAGATGCAATTATAGGTTTGGGAAGCCCTGCTCCTGTCATAGTTTCTGAA GGTGCAAACACCATGGATGTGGGTCGATCTGTGTTGATTCAGACAGAGCCCAGAACGAGGTTAGATGCAGGAACATGGGG GACAATGGGTGTTGGTCTCGGTTATTGCATTGCGGCAGCAGTGGCTTCTCCAGGTCGCCTTGTAGTTGCAGTTGAGGGGG ATTCTGGATTTGGATTCAGTGCTATAGAAGTCGAGACATTGGTTCGGTACCAGTTACCTGTGGTGGTGATTGTTTTCAAC AATGGTGGTGTATATGGTGGCGACCGCAGAACCCCAGAAGAGATAAATGGACCTCACAAAGATGATCCGGCACCTACATC CTTTGTCCCAAATGCAGGTTACCATGCTTTGATTGAAGCTTTTGGTGGAAAAGGCTATCTTGTTGGGACACCAGATGAAC TCAAGTCTGCTCTTTCAGAATCCTTCTCTGCTAGGAAACCAGCTGTAATAAACGTTATCATTGATCCCTATGCCGGTTCA GAGAGTGGGAGGCTGCAACACAAGAATTGA
Protein sequence (LotjaGi2g1v0238100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGEVTQIDGNTLAAKSLARFGVEHMFGVVGIPVTSLATRAVSLGIRFLAFHNEQSAGYAASAYGYLTARPGVYLTVSGPG CVHGLAGLSNAMANAWPAIMISGSCDQADAGRGDFQELDQIEAVKPFSKLSVKATDISQIPGCVARVLDRAVSGRPGGCY FDLPTDVLHQKVSESEAERLLVEAEKERQNTQAHGSGVENSKIEEAVSLLRHAERPLVVFGKGAAYARAEGAMRKLVEST GIPFLPTPMGKGLLPDTHPLAASAARSLAIGKCDVALVVGARLNWLLHFGEPPKWSKDVKFILVDVSPEEIELRKPHLGL VGDAKNVLEILNKEIKDDPFCLGSTHPWVQAITNKAKDNVIKMETQLAKDVVPFNFLTPMRIIRDAIIGLGSPAPVIVSE GANTMDVGRSVLIQTEPRTRLDAGTWGTMGVGLGYCIAAAVASPGRLVVAVEGDSGFGFSAIEVETLVRYQLPVVVIVFN NGGVYGGDRRTPEEINGPHKDDPAPTSFVPNAGYHALIEAFGGKGYLVGTPDELKSALSESFSARKPAVINVIIDPYAGS ESGRLQHKN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 189 | 188 | 1.3E-52 | – | |
| SUPERFAMILY | 6 | 176 | 171 | 8.16E-39 | ||
| PANTHER | 7 | 568 | 562 | 9.0E-266 | – | |
| PANTHER | 7 | 568 | 562 | 9.0E-266 | – | |
| Pfam | 9 | 174 | 166 | 3.0E-39 | ||
| CDD | 12 | 164 | 153 | 1.18107E-42 | – | |
| Coils | 174 | 194 | 21 | - | – | |
| Gene3D | 199 | 352 | 154 | 3.6E-39 | – | |
| SUPERFAMILY | 199 | 360 | 162 | 1.56E-38 | ||
| Pfam | 203 | 329 | 127 | 5.8E-34 | ||
| Gene3D | 354 | 569 | 216 | 3.0E-54 | – | |
| CDD | 376 | 555 | 180 | 9.40412E-77 | – | |
| SUPERFAMILY | 386 | 559 | 174 | 1.16E-40 | ||
| Pfam | 403 | 552 | 150 | 1.6E-25 | ||
| ProSitePatterns | 437 | 456 | 20 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Thiamine pyrophosphate binding | Interacting selectively and non-covalently with thiamine pyrophosphate, the diphosphoric ester of thiamine. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases. |
Expression pattern of LotjaGi2g1v0238100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…