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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0246500 |
| Transcript ID | LotjaGi2g1v0246500.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein KINESIN LIGHT CHAIN-RELATED 3; TAIR: AT3G27960.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9LII8|KLCR2_ARATH Protein KINESIN LIGHT CHAIN-RELATED 2; TrEMBL-Plants: tr|A0A151R9K3|A0A151R9K3_CAJCA Nephrocystin-3; Found in the gene: LotjaGi2g1v0246500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:71213049..71215386) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCTGAGAGAGCTATGGATGAGTTGAACATGAATATTGCAGGAGAGGGGCCTAGTGGGAGTTATACACCCCATAAGGA TAACTTCAATCAACAAGCATCTCCAAGGAGTACACTGAGTCCAAGAAGCATTCAGAGTAGTGACTCAATTGATTTGGCTA TTGATGGTGTGGTGGATACCTCAATTGAGCAATTGTATTACAATGTGTGTGAAATGCGAAGCTCTGATCAATCACCCTCC AGGGCTAGCTTTTACTCATATGGTGAAGAGTCAAGAATTGATTCAGAATTGGGCCATCTTGTTGGAGGTATCTTGGAGAT TACAAAGGAGGTGGTTACAGAGAATAAAGAAGAGTCCAACGGCAATGCTGCTGAGAAAGATATTGTGTCATGTGGCAAGG AAGCTACAAAGAAGGATAATAACCAATCACATTCACCAAGCTCAAGGATCATTGAAGGATCAGCCAAGTCAACCCCCAAA AGCAGAAATTTGCGTGAGAGACCATCAACTGACAAGAGGAGTGAAAGGAGCAGCAGAAAAGGAAGTCTTTACCCTATGAG GAAGCATAGGAGCCTTGCTTTGAGGGGGATCATTGAGGAACGTATTGCCACTGGGTTAGATAATCCAGATTTGGGACCAT TTTTGCTCAAGCAAACAAGAGATATGATCTCTTCAGGTGAGAATCCACAGAAAGCTCTTGATTTGGCTCTTAGAGCTCTG AAATCATTTGAGATGTGTGCAGATGGGAAACCCAGTTTAGAATTGGTCATGTGTCTGCATGTCTTGGCAACAATTTACTG TAATTTAGGACAATATAATGAGGCTATTCCCATTCTTGAGCGCTCCATTGATATTCCTGTGTTAGAGGATGGCCAAGATC ATGCATTGGCCAAGTTTGCAGGATGCATGCAGTTGGGTGATACTTATGCAATGATGGGGAACATTGAGAATTCTATACTG TTTTACACAGCAGGACTTGAGATTCAAGGGCAGGTCTTGGGGGAAACTGACCCGAGATTTGGCGAGACGTGTCGGTATGT GGCTGAGGCTCATGTTCAGGCTCTGCAATTTGACGAGGCTGAGAGGCTGTGTCAGATGGCTCTTGAAATTCACAGGGGAA ATGGAAATGGATCTTCTGCTTCTGTTGAAGAATCTGCAGATAGGAGACTAATGGGGCTTATCTATGACTCAAAGGGTGAT TATGAAGCTGCATTAGAGCACTACGTTCTGGCAAGCATGGCCATGTCAGCAAATGGCCAAGAACAAGATGTGGCTTCAGT TGATTCCAGCATAGGTGATGCCTATCTAGCATTGGCACGCTACGATGAGGCGGTGTTCTCTTATCAGAAAGCACTCACTG TGTTCAAATCAACCAAAGGAGAGAACCATCCAAATGTTGCTTCAGTCTATGTAAGGTTAGCTGATTTGTACAACAAAATA GGAAAATTCAAGGATTCAAAATCCTACTGTGAGAATGCACTCAGAATTTTCGGAAAGAGCAAACCAGGAATCCCCCCAGA AGAGATTGCTAATGGTTTAATAGATGTTGCTGCTATCTATCAATCCATGAATGATTTGGAGAAGGGGTTGAAGTTACTCA AAAAGGCCTTGAAGATATATGGCCATGCTCCTGGTCAACAAAGTACTATTGCAGGGATTGAGGCACAAATGGGGGTTATG TATTACATGCTAGGGAACTATTCTGATTCTTACAACATCTTCAAAAGCGCCGTTGCCAAGTTTCGTGCCAGTGGAGAGAA AAAATCTGCTTTGTTTGGGATTGCTTTGAACCAAATGGGTCTTGCATGTGTGCAACGTTATGCTATAAATGAAGCAGCAG ATTTGTTTGAAGAGGCCAGGACTATATTGGAGAAAGAGTATGGTCAATATCACCCAGACACCTTAGGGGTTTATAGCAAT CTAGCAGGAACCTATGATGCAATGGGAAGGTAATATTTTCATTGATGACTAACTCTCCGTAGTCCTTATTGTTCTGGCTT ATAATTATGGTATTTATGAGTGCTACTTTCTTCATCTCTTTTGTTTACAACTTTATGCAGTATAAGAATACTTGGAAATT TCAGATTTTAATTGCTGATATTTCTTGTGATAATTTTGCAGAGTGGATGATGCCATTGAGATTTTGGAATTTGTGGTTGG AATGAGAGAAGAGAAGCTCGGAACAGCGAACCCCGATGTGGATGACGAGAAACGTAGATTGGCAGAATTGCTGAAAGAAG CAGGCAGGGGTCGGAATAGGAAATCGAAAAGATCATTGGAAACTCTCCTTGATGCCAATTCTCGGCTTATAAAAAACAAT AGCATTAAGGTCCTATAA
CDS sequence (LotjaGi2g1v0246500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGCAAGGAAGATCAGCCAAGTCAACCCCCAAAAGCAGAAATTTGCGTGAGAGACCATCAACTGACAAGAGGAGTGA AAGGAGCAGCAGAAAAGGAAGTCTTTACCCTATGAGGAAGCATAGGAGCCTTGCTTTGAGGGGGATCATTGAGGAACGTA TTGCCACTGGGTTAGATAATCCAGATTTGGGACCATTTTTGCTCAAGCAAACAAGAGATATGATCTCTTCAGGTGAGAAT CCACAGAAAGCTCTTGATTTGGCTCTTAGAGCTCTGAAATCATTTGAGATGTGTGCAGATGGGAAACCCAGTTTAGAATT GGTCATGTGTCTGCATGTCTTGGCAACAATTTACTGTAATTTAGGACAATATAATGAGGCTATTCCCATTCTTGAGCGCT CCATTGATATTCCTGTGTTAGAGGATGGCCAAGATCATGCATTGGCCAAGTTTGCAGGATGCATGCAGTTGGGTGATACT TATGCAATGATGGGGAACATTGAGAATTCTATACTGTTTTACACAGCAGGACTTGAGATTCAAGGGCAGGTCTTGGGGGA AACTGACCCGAGATTTGGCGAGACGTGTCGGTATGTGGCTGAGGCTCATGTTCAGGCTCTGCAATTTGACGAGGCTGAGA GGCTGTGTCAGATGGCTCTTGAAATTCACAGGGGAAATGGAAATGGATCTTCTGCTTCTGTTGAAGAATCTGCAGATAGG AGACTAATGGGGCTTATCTATGACTCAAAGGGTGATTATGAAGCTGCATTAGAGCACTACGTTCTGGCAAGCATGGCCAT GTCAGCAAATGGCCAAGAACAAGATGTGGCTTCAGTTGATTCCAGCATAGGTGATGCCTATCTAGCATTGGCACGCTACG ATGAGGCGGTGTTCTCTTATCAGAAAGCACTCACTGTGTTCAAATCAACCAAAGGAGAGAACCATCCAAATGTTGCTTCA GTCTATGTAAGGTTAGCTGATTTGTACAACAAAATAGGAAAATTCAAGGATTCAAAATCCTACTGTGAGAATGCACTCAG AATTTTCGGAAAGAGCAAACCAGGAATCCCCCCAGAAGAGATTGCTAATGGTTTAATAGATGTTGCTGCTATCTATCAAT CCATGAATGATTTGGAGAAGGGGTTGAAGTTACTCAAAAAGGCCTTGAAGATATATGGCCATGCTCCTGGTCAACAAAGT ACTATTGCAGGGATTGAGGCACAAATGGGGGTTATGTATTACATGCTAGGGAACTATTCTGATTCTTACAACATCTTCAA AAGCGCCGTTGCCAAGTTTCGTGCCAGTGGAGAGAAAAAATCTGCTTTGTTTGGGATTGCTTTGAACCAAATGGGTCTTG CATGTGTGCAACGTTATGCTATAAATGAAGCAGCAGATTTGTTTGAAGAGGCCAGGACTATATTGGAGAAAGAGTATGGT CAATATCACCCAGACACCTTAGGGGTTTATAGCAATCTAGCAGGAACCTATGATGCAATGGGAAGAGTGGATGATGCCAT TGAGATTTTGGAATTTGTGGTTGGAATGAGAGAAGAGAAGCTCGGAACAGCGAACCCCGATGTGGATGACGAGAAACGTA GATTGGCAGAATTGCTGAAAGAAGCAGGCAGGGGTCGGAATAGGAAATCGAAAAGATCATTGGAAACTCTCCTTGATGCC AATTCTCGGCTTATAAAAAACAATAGCATTAAGGTCCTATAA
Protein sequence (LotjaGi2g1v0246500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWQGRSAKSTPKSRNLRERPSTDKRSERSSRKGSLYPMRKHRSLALRGIIEERIATGLDNPDLGPFLLKQTRDMISSGEN PQKALDLALRALKSFEMCADGKPSLELVMCLHVLATIYCNLGQYNEAIPILERSIDIPVLEDGQDHALAKFAGCMQLGDT YAMMGNIENSILFYTAGLEIQGQVLGETDPRFGETCRYVAEAHVQALQFDEAERLCQMALEIHRGNGNGSSASVEESADR RLMGLIYDSKGDYEAALEHYVLASMAMSANGQEQDVASVDSSIGDAYLALARYDEAVFSYQKALTVFKSTKGENHPNVAS VYVRLADLYNKIGKFKDSKSYCENALRIFGKSKPGIPPEEIANGLIDVAAIYQSMNDLEKGLKLLKKALKIYGHAPGQQS TIAGIEAQMGVMYYMLGNYSDSYNIFKSAVAKFRASGEKKSALFGIALNQMGLACVQRYAINEAADLFEEARTILEKEYG QYHPDTLGVYSNLAGTYDAMGRVDDAIEILEFVVGMREEKLGTANPDVDDEKRRLAELLKEAGRGRNRKSKRSLETLLDA NSRLIKNNSIKVL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 35 | 35 | - | – | |
| MobiDBLite | 11 | 34 | 24 | - | – | |
| PANTHER | 26 | 572 | 547 | 0.0 | – | |
| PANTHER | 26 | 572 | 547 | 0.0 | – | |
| Gene3D | 75 | 238 | 164 | 2.6E-20 | ||
| SUPERFAMILY | 87 | 521 | 435 | 5.87E-20 | ||
| ProSiteProfiles | 108 | 141 | 34 | 6.107 | ||
| Pfam | 108 | 137 | 30 | 1.4E-4 | – | |
| SMART | 108 | 141 | 34 | 34.0 | ||
| ProSiteProfiles | 108 | 141 | 34 | 6.97 | ||
| SMART | 151 | 184 | 34 | 9.2 | ||
| SMART | 193 | 226 | 34 | 14.0 | ||
| ProSiteProfiles | 237 | 270 | 34 | 5.9 | ||
| ProSiteProfiles | 237 | 520 | 284 | 16.873 | ||
| SMART | 237 | 270 | 34 | 37.0 | ||
| Gene3D | 239 | 438 | 200 | 6.6E-31 | ||
| Pfam | 243 | 261 | 19 | 0.18 | ||
| Pfam | 275 | 349 | 75 | 1.4E-11 | – | |
| SMART | 277 | 310 | 34 | 1.5 | ||
| ProSiteProfiles | 277 | 310 | 34 | 9.175 | ||
| SMART | 319 | 352 | 34 | 0.023 | ||
| ProSiteProfiles | 319 | 352 | 34 | 6.992 | ||
| SMART | 362 | 395 | 34 | 11.0 | ||
| ProSiteProfiles | 362 | 395 | 34 | 7.375 | ||
| SMART | 403 | 436 | 34 | 28.0 | ||
| ProSiteProfiles | 403 | 436 | 34 | 6.372 | ||
| Gene3D | 439 | 573 | 135 | 1.0E-19 | ||
| ProSiteProfiles | 445 | 478 | 34 | 5.281 | ||
| SMART | 445 | 478 | 34 | 52.0 | ||
| Pfam | 446 | 511 | 66 | 1.1E-8 | – | |
| SMART | 487 | 520 | 34 | 74.0 | ||
| ProSiteProfiles | 487 | 520 | 34 | 6.549 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0246500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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