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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0251500 |
| Transcript ID | LotjaGi2g1v0251500.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; TAIR: AT3G01370.1 CRM family member 2; Swiss-Prot: sp|Q8L7C2|CFM2_ARATH CRM-domain containing factor CFM2, chloroplastic; TrEMBL-Plants: tr|A0A1J7HHY7|A0A1J7HHY7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0251500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:71709823..71719268) extracted from Lotus japonicus Gifu genome v1.2.
GCACACTGCATGTTCTTGCAGAGTCTCGCTATCCATCTACGAACTCAGTCTCTCAATGTTGCTTCCCGCAACTCACTTCA CCTTTGCTTCTTCTTCTTCACTGCTCTTCTTCCCTCTTCAATTCCCCAAATCCAAAACCCGACCCGCCAATTTCATCATT CGGAGCTCCACCTCCGACACCCAAACCCGAACTCTCCCACACTCCGCCATCCAACGAATCGCCGACAAACTCCGCTCCCT CGGCTTCACCGACCAACCCGCCACCCCAACCTCCACCACCACTTCCAATCCCTCCGCCGCCGCCGGAGAAATCTTCGTCC CACTCCCCCACAACATCCCGAAGCATCGCGTGGGCCACACTCTCGACCCGAGCTGGAGCACGCCGGAGAATCCGGTCCCG CTTCCGGGCACGGGAATCGCGCGTTTGAGCGCGAATGAGTTGGAGAAGCAGCGGAAGGAGAGGGAGAGGGAGAGAGAGAA GAAGAAAGAGGGGAAAGTGCCGACGCTGGCTGAGCTGAGCTTGCCGAATTCCGAGATAATGAGGTTGACGACTCTAGGGT TTCAGATGAAGCAGAAGATCAAGGTTGGCAAGGCGGGGATCACCGAAGGGATCGTTAACGGGATTCACGAGCGGTGGCGG CGGTCTGAGGTTGTGAGGATTGTTTGTGATGATATTTGCAGGATTAACATGAAAAGGACTCATGACTTGTTGGAGGTAAC ACAACAAAAGAATGCAAAATTTATTTATTTGTTTATTGTTTGGATTGGATGTATACTAATCAATGAAATTGGGTTGTCAT TGTGAGAATTCGAACCAAATAATAGTCTTGTAGTGATTAATGTAGGACACTTCATGTATGCTTGGATCATCCTTCTAGTT GTATGTTGTAATTTTTTGTTTTGCATCCGGTTTTCGAGCTTTATGGTATTGATGAAGGCTGTGTTTGGTTTTCAGTTTGG AAGTTAGTTTGGGGCATTTGAATTTGATCGAATTCCCTCGAATTTCAATGCCCAAACGTGAACGAGGCTTTGAACCTCCG TTGGGTGAAAGCACTTTCAAACTGAAAACCAAACAGGCACGAAAGCATCACAGATTCACAGTAATGAGGTGAATGATAAC AATGAATTATATCTATAATGACTGAAGTTAGCTTTAAAAATATTGATGGTCTCTTCTGCATAATATTTGTGCTTTTATTT TAATTTTTTGTTTTATTATATTTTGTCCTATTAATTTTATGTTGTGCATTATACTCGTGATTGCATTGTGTTGTATCCAT GTCCCTTGTTATGTTAATGCTTTGTAAGTGGACATATATTATGAAAGCGTTACTCTTTACCTTTTCTTTTTAATATTTTG TGCTAAAAATCCTCGAGATGTCCTTCATAACTGTGAGTAGTTGTAGAAAACCCTATGTAGTACAAAACTTTGCGGCTTAC TCTAAAGTCTAAACTTTAAAGTTACAAAATTGTGCATGCTGATTCTTTATGAACGAGTTTTCTGTCCATGATCAAGTCAT TAGATTGGCACTACTTTGTATGGCTTTGTAAGAAGAGGGGGTCTAGTTGTTAAGGTGACATTTGTTTTTTAATTTTTTTA TCTGTTTCCATTTATAAATTATAAACAAATCTCCTTATTTTGACATGCTTTCTTGTTTCCAATTATTATTGCTTTGATCG GTTTAGGAGAGGATGTGAGAAGAGAGAAAGTGGTGTGAAACGAAGAGATTTTATATGTTGTTTGGAAAAATAGAAATAGA GAAGAAAGAGAAGAGAAAGAATGAGGTGCCTGCTATCTCCTTTTGTTTGGTTGAGTAGAGAATGAAAAGAGATGAAGATT ACTTTTGTATGAAATGCCATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGCTA TCTCCTTGTCTATGTCTTGCCATTTTCTTCTTTAACAAACAGAACATATGAAAGAAACGGCAAAAACAACATTTTGTTGT TTTAGCTGTTTTTATAACTATTAGTGGAAGCGTATCATTTGAAGTAAAAAACAGAAAATATATGAAGTACTGCCTAAGTT TTCAACCACGGGAGGATTTCTGCTATCAACCAATAGTTGGAAGGGGGTTATGTATGTGCATTTTGGCCTATTCTTTCCTG CAATATGATTAGGGTGTCCTACGTATAATTATCTGACTATAGCTTGTAACACTGATTGTCAGAGAAAAACTGGAGGACTT GTTGTTTGGAGATCGGGAAGTAAGATAATATTGTACAGAGGGATTGATTATAAGTATCCTTACTTCCTCTCAGATAAGGA TTCGAGAGATGAACACATTGGTGATGCTGAGCAACATATGGATCGCGATGATGAAAAAGAGAGCCACTCATCTGAAACAA ACTCAGAAATATATGCTGGTCATAGTTCAAACTCCAAAACATCAAAGCCAGCTTTGATACAAGGTGTTGGTACTCCAAAT AGAGTACGATTTCAACTGCCAGGTGAGGCAGAGCTTGCAGAAGATGCAGACAGCTTATTAGTGGGGCTTGGGCCACGATT TACTGATTGGTGGGGGTATGAACCTCTGCCTGTCGATGCTGATCTTCTACCTGCTGTTGTTCCTGGATATAGGCAGCCTT TTCGCCTACTTCCATATGGTGTGAAGCCTAAACTGACGGATGATGAAATGACAACTTTGAGGAGACTTAGCAGACCTATA CCATCCCATTTCGCGTTAGGTGAGTTTGTCTTACTTTTTCTTATTTGTCATTCTGACCAAAATTTAGTTCAATTGCTTTA TTTGTTCTTTTCTTTTACAGGTAGAAACAGGAAACTTCAAGGATTGGCTGCTGCAATTATTAAGCTTTGGGAAAGATGTG AGATTGTCAAGATTGCTGTAAAGAGAGGTGTGCAGAATACTAACAGTGAGATTATGGCTGAAGAGATAAAGGTCTATTAT TTATTTATTTATTTGCTGATAATTTTCAAATTTAATCAAATTTAGCACTTATGGTTCAATATTTTGATAAATAGAAGTGT CTGTCTTAGAATACACCTGCTCTTTTGGGTGCCATATGTTGTGGATGAATGAAACTACTGCAGTTAACTATTTATCATCA AGGTCATTTGTAAATTGTTTGGGAACATTAGCAAGGATATTTGGCCTTGGATGGTAATTAAATTCACATATTTGTTTTTA TGTTTTTATGTTCATGCTGGTGGCTGAAATGAAGTACCTTGAACACTGGCATTAAAGAAAATAATCTCTGATTCACATCA TTAAATAACTTCTGATTCACACCATTAAAGTAAACTTTTTCCAGGATCTAGATACCACGTTGAGAGAGAAGAAATGAGAG ACATGACGGAATCTGTGTGTGCCAATTGGATAGTGGAGGATAATATATCTACTAAAGAGTCATTAATACAAGGATTTACA TTTATCCTTATTACTATAGTCAGAATAATATACAACACCTGATCAATACCTAATCATGCTTTGTAACACCATACTTCTGG ACGTATCCAACTAATCCTGCTTTGTAAAGATCAAGAATACAGTACGATCTATACTTGACATTGTGTATTTATTTGTACCC TACCAGTCTTTTGTCTCCTGGGCTTTCAACGATCTCCCATCTTCCATTCTTTTCTTGTGATTTTATTTCCTCATTCATAG CTTGAACCCAATAATTATCTTCTAATGCCTCTTGTACTAATGTTGAGATTTTGGTCAAGTCAATGGCCGAAATGATTTTG GTGTTTCAAAGATGTCAAGAGACAAATTGAGAAACAGGGCACTTTGCACAGGATTTTTTTCCTTTTCTTTAAAGCAATTG ATAAGCCATTGGAGTCAGAATTAGAAATATGAGAGCCAGAGAGAGGAGGATTAGTATTTTCAGTCCTAACCACTGGCTGG GTTGACTGAAGTTGCTGTCGGACCAGTACAAGTTTTCCTTTCCTTTGGCATACCAATGTTGCCATACTGACCTTCTTTGT GGGTTCTAGTGCAGAAGGTATTATAAATTCCTGTGTTTTGGTATCAGAGGAAGTGGTGACTCAAATAATTGCCATGCTGT TTACATTATTTACAACAGAGCACAAAAATCCACCATCAGTTTTAAATGAATCGCTTTTCTGGTCTTGTAAACACATCTCT TAAGTTTTATGTAAATGTAATAGCTGAGATAGTTCTTCTGAGAGAACTTTAGTAAGACTGAAATTTGTTTTAATATCATA CTATTATACCTCCTTCTCAGCTTAATAAAAGGTCTACTTTTCTACAGCATCTAACCGGAGGAAATCTCCTTGCTCGGGAT AGAGAATTTATTGTCTTTTATAGAGGAAAAGACTTCTTGCCAGCTGCAGTATCTTCAGCAATTGAACAACGGAGGAATAT TGGATTATACAAACTAAAGGCAGAAAACAGTTTGTCAGTAGTCCCTGCAGATTCTGAAGGAAATGGTGTGACCTTTCAGA AAGATACAGAAATCTTCAAAAAAGAATTGTTAACTAAAGCTAAGGAAGCTAATAAATTCAAAAAGAGTAGCATCAAATTG TCAATGGTATGATTTTTCATAAACAAGCTCCAATTTGCTGTATTTCGCTTATCTTTTAGGAGTTACTGGCAGTATAGCTT TCATATACAGGCATTAGAGAAGAAAGCAAAGGCTGAAAAACTTCTAGCAGAGCTGGAAAATGCAGAGAGCCCCCAAGAAC AAGAAATTGATAAAGAGGGTATTACGGAAGAAGAGAGATACATGCTGCGGAAGATTGGCTTGAAGATGCAGCCCTTCCTT TTATTAGGTGATTCTAGAGTATGATGTTTGAAGATCAGTCACAGATAGTGGTCTAAAATTGGAAGTAAATTAATGAGACC TTTAAAGCTATTTAAAATACTTGACTTAGATCTAGTCTTTTCCTGATAATCATCTCTTTGTTCACAGGTAGACGAGGGGT TTTTGATGGAACAGTGGAAAATATGCATCTTCATTGGAAATATCGGGAGCTCGTGAAGGTAATATGTAAAGAGGGAAGCC TGGAAGCTGTTTATCAGGTAGCTCAGACCTTAGAGGCAGAAAGTGGTGGAATATTAGTTGCAGTAGAGAGAGTGAGCAAG GGCTATGCAATCATTGTGTATCGTGGAAAGAATTACAGTAGACCTGCTAGTTTGAGGCCTCAAACACTCTTAAATAAAAA GCTAGCAATGAAGCGTTCTATAGAGGCACAGCGCTATGAGGTAAAATCGCCTTCATCAAGTTGTATTCACCTAGGAGTGT CAGCTAATTTGTTTTCTACATATCCTTTGTGAAAGAGTGAAAAAGAAGCGTAAGGTGGGAGAGTGATTTATTTGGATATA GATCTTTTTTATATAAGCTTTTGCAAAAGACCTTTGAAAAAAGATAAGTTATTTTATGTATAAATACTTTATTTAATTTT TTAACTGTTTTTTTTATTTTGTTAAAAAGTTTGTTGTTTAGAAACAACTTTATAGCTTATTAAAAAAAGTACTTTTATAC TTCTATTAGTCCTCTTTTTCAGAAAATTAAAAAAAACTTTAAATACAATAAAACACTCAATTCTTTTGTTTAAATTTAGA AAAGGTACACTCAATGTTCGTACAGTAGACAGGTGGAGTTAATTTTATGTTGGCAGTGGTGCCTGCAAGTGACTACTGCA TTGTGGCATGGGTCTTCAACCTTTTCATTTTTTATTTATTTACTTGCAAAGGAATTGACTGCTAATCTTATATGATATAT TCCTTTCTCCTCATTTTTTGCAGTCATTGAAGCTTCATGTTTTGAACCTAGATAAAAACATAAATGAGTTGAAACTTCAA ATGGTGAGTAGTCCTCATTTTATTATTATGTTCCTGAAATACTTTTCCCCTTGACTTCAATGGAAAAATACTGATTATTC ACCTAACCAGGTTAAAGATGAGGCTAATAGTAAGCAGATGCCTGAAACGTTGAGATCTGACTTGGTGAGTGGTCCTCATT TTATTATTATGTTCCTGATATACTTTTCCCCTTTACTTCAATGAAAAAATACTGATTATTCACCTAACCAGGTTAAAGAT GAGGCTAATAGTAAGCAGATGCCTGAAACGTTGAGATCTGACTTGGTGAGCTATCTCATGTTGCTTCTTTATTAACTCTA TGATCTCCTCTCCATGTTACAGATATGAGATTAGCATTTTTTGTACATCAGGCCAAAGAGGATGGAGGCTAGGCAAAATC CATTATGAATATTTACTGTTAGAATAAACTGCTGAACCTAAACTTCTTTGCTTTTTCTTTTTAACAAGGACACATGCATA TGTGAACACGTTATATTTGAACTCAACATACGTAAGAATATTTGTTTTTTAATTGTTTTTCTGCAGGATTTTAATGATGG AAAGTTTTCCCTTTTGTAAAAAAGAACCTCGGCAGATTATGCCAAACTCTCTCTCTCTCACACACACACACACACAAACG CATCGTAGAACATATTCAACATCCATCATGTATGAGATCCTCAGCTTATTTTTCTTGTGGTACTTCTTTATTCACTTTCT TTTGTCCAATTACCAAGGACACTGATTACATGTGAGGTGATTAATTCAAAATAAGAGTAGCTAACTATAGCATTGTTACC TAGGTGTAGGTGTCTAATGAAATGTGAAAATGGCTCAGGTGCGACTAACATGACCTAATTCTATGCTCGTGTTAATTACC TATTTTACCATGACTGAAGCACATGATTTAAACGAGTTTCTTATGTTGTTGTCGAATTGACAACGGGCTATACGAAAACA TAAAATCAGTATTTTAACAATAGAAATTTATTAAGAATTATTATCCCAGTGACAGTTACTGGAATGGTTTCCTAAATTAG TAAACTATGACATCTGAATAGTTGTATGCATGATTCTAGGTTACAGACAAACATGGAGCTAGTACAAATTCTACTAGTTG CAATTCTCCAAAAGAAGCTTCTTTTGAGAATCAACAAGCAATACAGGAGCAGCAGGTTGAGCTCATTGATGGTGGTGGAG CTCGTCCAGGTGAATTAGATTCCTGGGCTGGTTCGATTCATAAAGAAACACAGGCAAGCACATCATGGCTTTGACTGATG AAAATTGAAGCATTGACCAAAGATCCTATCCTGGATTATTATCTGGTTATGTCAAGTTTACCTTTGGCATGTTTTTGGGT TCTTGTTTCTCTTCTAAATATTTATATGGTAAAATTAATATGGGTTTCAGCCGGACGTAGTGAGTGATTCTGTGGTGGAT GCTGGACACTGTGCCTCTAATGAAAAAGATATGGAATCATCAATCGCATCATCAAAAAGTGATCCTGAACCACCAGCTTC AATTATAAGTAGGAGATCGAATGATTTACCTTCCAGATCTGTATTTCTTTCCAACAGAGAGAGACTACTTCTTCGAAAGC AGGCCTTACAGATGAAAAAGCGACCTGTCCTTGCCATAGGTATTGTTTTCAGCTTTATTTTCTTTATGGCGACAATGTAT GCCCTATGTTGTCTTGACACTTCAGTTTATCTTTTAAGTTTTAAGTTATGTGATCTTGCTAATAGTGTTTGATTGGAGAG GAGCGGAGATATTTTTTAAAATCAATCTTATTTGGTTCAAATTTTAGGAGAGGGTGGGAAGGAAATGGAGGGGGCCAAAG CCCCTCCCAACTCAATTTTTGTCTCCCCCTTCCCTTCTCTCGCCTTCATTAAAACCCTTCCCTTCTTTGATTAAACACCT CCTAAGAGTTTTTGTTTTGTAGCATGCAGTGTAAGTTCCATCTTTTATTTTTTGATTTTCTGCATTAGCTAGAGACAATA GATGGTTTTAGAAGAGTAAAGATAGCTAACTAAATGTTAGGGTTCCAAATATTATTGGGCCTTTTGGGTCTGCTTAAGCC AGTGTTTGGACCGCTCCTTGAGCTGTTTGGTTGAGTCTATTTTTATTTATTAAGTTGGGCGGTTTGGGCTAACCTTATTT TACTAGTAGGGTGGACTATTATAAATATGAGTATTAGCATTAGGTTAGGTTTCATGCTTTGATTATTAGAGTTTGTAAAA GGGTTTCACTTTCACCATTGGAAGAAGGTTCACCACCTTCTTGGTTTCTTTCAGTCGATTTCAGAGTTTATTTCAGATTT CCATTCTCTATTCCTATGATCCTATCTTTATTTGCTGGTTACTGTTGGGGTATTTTTATATTCTAACATCAATGCTCTAG GTTCAGAGTCTTCATTGGTTAAAAAAAGTGGACAAAACTGTTAGGGTTTTTTGTCTCACTGATTGTGATTGTAACTCATC AATTGATATCACTGATTGTGGTTGTCTCACTGGATGATGTGTTAAGTACATTCTTTCCAGATAGCTCTGGAACTGCTTTT TTCTGCTTTGCCACCACCTCTTATATTTCTTTTGTATTTTCCTGAAATGGAAAGGAATGTCATCATTTTCTTTTGTTCTA TGGCCATATTTTATTCTCAGGAAAGAGCAATACTGTGAGTGGTATTGCCAAAACAATCAAGACTCACTTCCAGAAACACC CTCTTGCCATAGTTAACGTCAAAGGAAGGGCAAAAGGGACCTCAGTTCAGGAAGTGGTATTCAAGCTAGAGGTGTGCAAC TGCTGAAATTCATTTCCCTTTTTTAATATCTTCCTTTGTGAATTATTCTTTCTTGTCTTGGGCAGTAAATATTCTCCAAA TCCTGAAATTTGTTTTCCCTAATCCCTATTATTCTTGCAGCAAGCAACAGGTGCCGTTCTAATCTCTCAGGAGCCTAGCA AAGTAATACTTTACAGAGGTTGGGGTGCAGGAAAGAAACCTGGCACTGCAAAAGAAGTTAATGAAATGGGTAAAGAGGAA GAGGCAAAGCCCATTGTGTCTCCTGAACTGTTGGAAGCAATCAGAGTAGAATGTGGGTTGCAGTAACAAACAAAACATAG AGAGAAAAATTGGTGCAAATTGACGATAGATATTAAATTTTTTTAGGGTGTCAAACATATGATTGTAGTGAGAAGGAGAA CACCAAACAGTGTTTTCTTGGACTTCTTGTTACCGTCACTGACCATGATGTATTGCTGCAATGTTAATGCAATGTTCTTT ACCACAGGCACGTTGGATGAAATAGCTTTTTTTCTTCTTTTTAATGACTGAATTAGGAAAGTAATTAAGCAAACACAAGG AGATGAGTGATTGAACAGAGATAGTTTTTTCTTGGATTGTTGAAGAAGATGAATGTTTGCGGAAATGTTGGAAAAGTGTT TGAATTTCGGAGTTGGCTTTGGGGGTTGGTTTCTGAGTTGTTTTTTTATTTGAAGAAGGTGAAGAGAATGGAAAAAAAGT GAAGGGAAATGGTGGCTGAGAATGGTGTTCTTGGTAGGGTAAAAGATAATCTGAGGAAAATTAAGGACTTGGTGAGATGG AGGGCC
CDS sequence (LotjaGi2g1v0251500.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGCTTCCCGCAACTCACTTCACCTTTGCTTCTTCTTCTTCACTGCTCTTCTTCCCTCTTCAATTCCCCAAATCCAA AACCCGACCCGCCAATTTCATCATTCGGAGCTCCACCTCCGACACCCAAACCCGAACTCTCCCACACTCCGCCATCCAAC GAATCGCCGACAAACTCCGCTCCCTCGGCTTCACCGACCAACCCGCCACCCCAACCTCCACCACCACTTCCAATCCCTCC GCCGCCGCCGGAGAAATCTTCGTCCCACTCCCCCACAACATCCCGAAGCATCGCGTGGGCCACACTCTCGACCCGAGCTG GAGCACGCCGGAGAATCCGGTCCCGCTTCCGGGCACGGGAATCGCGCGTTTGAGCGCGAATGAGTTGGAGAAGCAGCGGA AGGAGAGGGAGAGGGAGAGAGAGAAGAAGAAAGAGGGGAAAGTGCCGACGCTGGCTGAGCTGAGCTTGCCGAATTCCGAG ATAATGAGGTTGACGACTCTAGGGTTTCAGATGAAGCAGAAGATCAAGGTTGGCAAGGCGGGGATCACCGAAGGGATCGT TAACGGGATTCACGAGCGGTGGCGGCGGTCTGAGGTTGTGAGGATTGTTTGTGATGATATTTGCAGGATTAACATGAAAA GGACTCATGACTTGTTGGAGAGAAAAACTGGAGGACTTGTTGTTTGGAGATCGGGAAGTAAGATAATATTGTACAGAGGG ATTGATTATAAGTATCCTTACTTCCTCTCAGATAAGGATTCGAGAGATGAACACATTGGTGATGCTGAGCAACATATGGA TCGCGATGATGAAAAAGAGAGCCACTCATCTGAAACAAACTCAGAAATATATGCTGGTCATAGTTCAAACTCCAAAACAT CAAAGCCAGCTTTGATACAAGGTGTTGGTACTCCAAATAGAGTACGATTTCAACTGCCAGGTGAGGCAGAGCTTGCAGAA GATGCAGACAGCTTATTAGTGGGGCTTGGGCCACGATTTACTGATTGGTGGGGGTATGAACCTCTGCCTGTCGATGCTGA TCTTCTACCTGCTGTTGTTCCTGGATATAGGCAGCCTTTTCGCCTACTTCCATATGGTGTGAAGCCTAAACTGACGGATG ATGAAATGACAACTTTGAGGAGACTTAGCAGACCTATACCATCCCATTTCGCGTTAGGTAGAAACAGGAAACTTCAAGGA TTGGCTGCTGCAATTATTAAGCTTTGGGAAAGATGTGAGATTGTCAAGATTGCTGTAAAGAGAGGTGTGCAGAATACTAA CAGTGAGATTATGGCTGAAGAGATAAAGCATCTAACCGGAGGAAATCTCCTTGCTCGGGATAGAGAATTTATTGTCTTTT ATAGAGGAAAAGACTTCTTGCCAGCTGCAGTATCTTCAGCAATTGAACAACGGAGGAATATTGGATTATACAAACTAAAG GCAGAAAACAGTTTGTCAGTAGTCCCTGCAGATTCTGAAGGAAATGGTGTGACCTTTCAGAAAGATACAGAAATCTTCAA AAAAGAATTGTTAACTAAAGCTAAGGAAGCTAATAAATTCAAAAAGAGTAGCATCAAATTGTCAATGGCATTAGAGAAGA AAGCAAAGGCTGAAAAACTTCTAGCAGAGCTGGAAAATGCAGAGAGCCCCCAAGAACAAGAAATTGATAAAGAGGGTATT ACGGAAGAAGAGAGATACATGCTGCGGAAGATTGGCTTGAAGATGCAGCCCTTCCTTTTATTAGGTAGACGAGGGGTTTT TGATGGAACAGTGGAAAATATGCATCTTCATTGGAAATATCGGGAGCTCGTGAAGGTAATATGTAAAGAGGGAAGCCTGG AAGCTGTTTATCAGGTAGCTCAGACCTTAGAGGCAGAAAGTGGTGGAATATTAGTTGCAGTAGAGAGAGTGAGCAAGGGC TATGCAATCATTGTGTATCGTGGAAAGAATTACAGTAGACCTGCTAGTTTGAGGCCTCAAACACTCTTAAATAAAAAGCT AGCAATGAAGCGTTCTATAGAGGCACAGCGCTATGAGTCATTGAAGCTTCATGTTTTGAACCTAGATAAAAACATAAATG AGTTGAAACTTCAAATGGTTAAAGATGAGGCTAATAGTAAGCAGATGCCTGAAACGTTGAGATCTGACTTGGTGAGCTAT CTCATGTTGCTTCTTTATTAA
Protein sequence (LotjaGi2g1v0251500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLLPATHFTFASSSSLLFFPLQFPKSKTRPANFIIRSSTSDTQTRTLPHSAIQRIADKLRSLGFTDQPATPTSTTTSNPS AAAGEIFVPLPHNIPKHRVGHTLDPSWSTPENPVPLPGTGIARLSANELEKQRKEREREREKKKEGKVPTLAELSLPNSE IMRLTTLGFQMKQKIKVGKAGITEGIVNGIHERWRRSEVVRIVCDDICRINMKRTHDLLERKTGGLVVWRSGSKIILYRG IDYKYPYFLSDKDSRDEHIGDAEQHMDRDDEKESHSSETNSEIYAGHSSNSKTSKPALIQGVGTPNRVRFQLPGEAELAE DADSLLVGLGPRFTDWWGYEPLPVDADLLPAVVPGYRQPFRLLPYGVKPKLTDDEMTTLRRLSRPIPSHFALGRNRKLQG LAAAIIKLWERCEIVKIAVKRGVQNTNSEIMAEEIKHLTGGNLLARDREFIVFYRGKDFLPAAVSSAIEQRRNIGLYKLK AENSLSVVPADSEGNGVTFQKDTEIFKKELLTKAKEANKFKKSSIKLSMALEKKAKAEKLLAELENAESPQEQEIDKEGI TEEERYMLRKIGLKMQPFLLLGRRGVFDGTVENMHLHWKYRELVKVICKEGSLEAVYQVAQTLEAESGGILVAVERVSKG YAIIVYRGKNYSRPASLRPQTLLNKKLAMKRSIEAQRYESLKLHVLNLDKNINELKLQMVKDEANSKQMPETLRSDLVSY LMLLLY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| PANTHER | 2 | 709 | 708 | 0.0 | – | |
| PANTHER | 2 | 709 | 708 | 0.0 | – | |
| Phobius | 8 | 19 | 12 | - | – | |
| Phobius | 20 | 24 | 5 | - | – | |
| Phobius | 25 | 726 | 702 | - | – | |
| MobiDBLite | 101 | 148 | 48 | - | – | |
| Coils | 122 | 146 | 25 | - | – | |
| MobiDBLite | 127 | 148 | 22 | - | – | |
| ProSiteProfiles | 154 | 250 | 97 | 19.855 | ||
| Gene3D | 154 | 252 | 99 | 3.2E-11 | ||
| SUPERFAMILY | 155 | 249 | 95 | 1.44E-24 | ||
| SMART | 156 | 239 | 84 | 2.4E-18 | ||
| Pfam | 156 | 239 | 84 | 2.2E-27 | ||
| MobiDBLite | 264 | 278 | 15 | - | – | |
| MobiDBLite | 264 | 299 | 36 | - | – | |
| MobiDBLite | 279 | 299 | 21 | - | – | |
| ProSiteProfiles | 369 | 466 | 98 | 16.703 | ||
| Pfam | 371 | 455 | 85 | 4.3E-13 | ||
| SUPERFAMILY | 371 | 463 | 93 | 5.76E-19 | ||
| SMART | 371 | 455 | 85 | 1.8E-9 | ||
| Coils | 527 | 547 | 21 | - | – | |
| ProSiteProfiles | 558 | 658 | 101 | 19.966 | ||
| Gene3D | 559 | 660 | 102 | 5.8E-8 | ||
| SUPERFAMILY | 559 | 655 | 97 | 1.11E-23 | ||
| SMART | 560 | 647 | 88 | 9.0E-25 | ||
| Pfam | 560 | 647 | 88 | 2.4E-18 | ||
| Coils | 678 | 705 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
Expression pattern of LotjaGi2g1v0251500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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