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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0278900 |
| Transcript ID | LotjaGi2g1v0278900.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 2A regulatory subunit A; TAIR: AT3G25800.1 protein phosphatase 2A subunit A2; Swiss-Prot: sp|Q38950|2AAB_ARATH Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform; TrEMBL-Plants: tr|V7C7V5|V7C7V5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0278900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:75034456..75039764) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTTGATGAGCCACTATATCCAATAGCAGTGCTTATAGACGAGCTGAAAAACGATGACATCCAGCTGCGGTTGAACTC AATTCGCAAGCTATCCACGATTGCTCGTGCGCTTGGGGAGGAGCGAACTCGTAAGGAGTTGATACCGTTTTTGGGTGAGA ATAATGATGATGATGACGAGGTGCTTCTTGCAATGGCGGAAGAGTTGGGGGTTTTCATTCCGTTTGTTGGGGGAGTGGAG CATGCCCACGTGTTGCTCCCGCCTTTGGAGACGCTTTGCACTGTTGAGGAAACGTGTGTGAGGGATAAAGCTGTGGAATC ACTTTGTCGAATTGGACCTCAGATGAGGGAGAGTGATTTGGTTGAGTATTTCATTCCTCTGGTCAAGGTAACTTTATTTT GTTTCACTGATATAAACATATTTATTATTACCATATGTTTAAAACATTTGGAATGTTTGTACAAAAGAAATTTTCATTGG TCATGCTAGGTTCTTGTGCCTATCCTGGTTCTGATTATCACATTCATTTATTTTTCTAGAATTTTAAAAATTATTTTATA TGAACAAATTGGTAGTCTTCTTATGAAATAGAATGTTCTTGATTAATTCTACTGATTAACTCTGTGTTAGAAACGAGAAT ATCTAGAAATTATCTTGTAACATCATTATGGTATCTTAGATAATCTCTTAAGAGAGGTTTCCTTAATTCATTACATTTCC TGATTTGTTTTCTTATTTGATTTTGGTTATGATTAGGAGTCTATTGCAAGTACAAATAGTGATTAGTGCTTTGGGTTTTG TATCACATCAATATATATTATAGAATATTATTCAGTCTATTTTATCTTTTACTTCTTTCATTACCTAAATCCCTACATTT TCAACAACTTGAATGATGCCTATATCTTGCTTATGTCACACTACTATTTGCCTGCAGTATCTAACTCCTTGGTGGTGGTG CTAATTGCTAAATGGTTGATTTATTGTAGAGAATGTTCATTAGTTATGATATGTTGAATTTATCCTGTTAGTCTGGTAGT TTAACATCTTGCTGAATATATGTTTTGCATTTTGTTTCAGAGATTGGCAGCAGGTGAATGGTTCACTGCCCGAGTGTCTG CATGTGGACTAGTTCATATTGTTTACCCAAGTGCACCAGAAATGTCAAAGACAGAGTTGAGATCAATATACAGTCAGCTG TGTCAAGATGACATGCCAATGGTTAGAAGGTCTGCTGCATCAAATCTTGGGAAGTTTGCTGCAACTGTTGAATATGCTCA TTTGAAGGCAGACATCATGTCAATTTTTGAGGATCTTACTAAGGATGGTAATTGAATATGCATTTCTATAAAAAGTTTGT CAATTGAGTCCATAACGTATTTTCCTAGACACAAGTGGAGTTTTAAATATGTAATTTAGTTTTTGACTTGTTTCAGATCA AGACTCCGTTAGATTGTTGGCTGTGGAGGGTTGTGCTGCTCTTGGCAAGCTGTTGGAGCCACAAGACTGTATCACTCACA TACTTCCAGTGATCGTTAACTTCTCGCAGGTGCATCTTTAGGAGTGGATAAAACTATAGGTGTATACATACGTAGTTACG TACATATATTTATGTATGGATGTATTATATTTAGCTCCTCTCCTATCAGGTGTTATATGTGTGTGTGTATGATGTGCACT TACCAAAAATATCTCAAGATATATGATTTAATGCAGTACAATGATTTTAAAGATAATGATACGCAATACTAACCACTATA ATTATACTGTTATAGATATATTTAATTTCATCAAAATATCATTACTGCAGTGTAATGATAATGTGATATTTTATTGACGA ATAGTAAACTTATAATTATGTATTCTATATTTTTTAATTTCACCTTCTATTTCCTTCTTGTTTAGTTAAAACTTCCTATC AGGGAAAAGGAAAATAATAATTTAAACTATTCAGTCTCTTCCCTTCCCCTTCATTTTTATTTATGCCTGTATTTATGTAT TATATATATGTGGAATGTTGTGTCTGTGTCATGTACAGCAAGTGACACTTATGAATTGATTTATGATTTTTTTATCTGAT TTGATTTTGCTTGATCCTGTATAGGATAAGTCTTGGCGTGTGCGATATATGGTTGCAAATCAATTGTATGAGCTCTGCGA AGCTGTTGGCCCTGAACCTACCAGGTATTTTGTTTTGGCTAATTATTAGACATGCTGCAGATCTTTCTATCATATAATTC ATGACCATAGTGGGGCGGTCATGAAAATTTTTATATGCTAACACTTATGATTCTTCTACTGGTTTCCTCTTATATTTACT AAGCTACTGATTCAGTCTCCACTCTCCAGTCATTAGATCTACTTATGTTTGTTAAGTTTTCTCTCATGATATTGTTTTTT TATGAAGAACGGAATTGGTCCCTGCTTATGTGCGGTTGCTTCGAGACAATGAGGCTGAAGTACGGATTGCAGCTGCAGGG AAAGTGACAAAGTTTTGCCGGATTTTAAATCCAGATCTTGCAATTCAGCATATTCTTCCTTGTGTGAAGGTGTGCATGTC TTTTGTTTTGATCATGAATTTCAGTATTCTTAAATTTACATTTGCAGGTTTAAATACTTTGCAACAACTTTTGCAGGAAT TGTCATCTGATTCTTCGCAGCATGTTCGCTCTGCTCTGGCATCAGTAATAATGGGAATGGCTCCAGTATTAGGAAAGGTA AGGTACAAGTGTCAAATAGCATCTTTGTATTTATTAAGACTTTTATATAGGGTCTACTGCATTATGAATGTATTACTTTT CATTCTGCAACGGATGCCGTGGCAATGTTGTTTAACCTTTTCTCCTTGTTCTCCGTTTTTGATCGATTTATCGAGGAACT ACTACCTATTATTCGTTTTCTTCATTGCAGGATGCAACAATTGAGCAGCTTCTTCCTATTTTCCTTTCCCTTTTGAAGGA TGAATTTCCTGATGTGCGCCTAAACATCATAAGCAAGCTTGATCAAGTGAATCAGGTTTATAAACTTCTGAAGTGGGTTT TATGTGCAAATTGCTTTATACTCGTTGACAACCTGTTTCTTTTTCTCTGGTGATGCTATTATTTCTGGCATAGTTTATGG CCTTATGCCTGCATGCAGCTCTCTACTCGCATACAAAATATAAAGCATATAAAGAAATGAAAACTTTTACAGATGTTGAT CTAGTCATACTTGCAGGTTATTGGAATCGATTTGTTATCTCAATCTTTACTACCAGCCATTGTTGAGCTTGCTGAGGACA GGCATTGGAGGGTTCGGCTTGCAATCATAGAGTATATACCCTTATTGGCAAGCCAATTGGGGGTTGGGTTTTTTGACGAT AAGCTTGGTGCTCTTTGCATGCAGTGGTTACTGGACAAGGTTTGAGGACAACATTTCCTTGCTCATTTTAGCATATTTTA GGGGGCCCTTTCTTCCACATGAATGTGGTTGTCAACTGCCTTATTGTTTCTTGCAGGTTCATTCAATTCGTGAGGCAGCT GCTAACAACTTGAAGCGCCTGGCAGAAGAATTTGGTCCTGAATGGGCTATGCAGCACATAATTCCACAGGTTAATGTGTC GGCATAGTTTATTGTTTTCTTATCGTGCACCAACATCAACATGTCTCTGTATGATATTATGAATGTGTTTGTGTGGGTGT ATGTCTATCTCTTATTGTCTTTTATTTGAAGTTTCTTTACCTGTTTTACTTGACATTTTGATTTGGATACATTTCATTGC TTACAATATGATGGAATTTTAGAAAATCGCATAAACCTTAGTGGATGAAGAAAAAGCCTCGTGCTGGATCAGTACAAATG TAACTCTTTTGAGTAAAGTATAAGTTACAGAGAAGCTGATATATCTTAAGGAGTTCTTTAGTTCTGGATTATCATTTTTG CATTTTTTTTTGTTAATAATCCAGATATAAATTTTATTAGCTTGTGTGGAGAATTATATTCTAGTAACCAATTTGTAGAT ATATCTTGTGTGGTATTAAAATTGCTTGAAAGTGTCATTAAGGTTCTTAAGCGTGGTATCTTGAACAAGATAAATACTTC AATCAATTGGAGTGTGTAAGTGTAATGAATGAGTGTCAATTGGAAGTACAGATGGGGACACAGTAGTGTCACTAGTCTTG ATTGAGACTGAGAAGCTTGCACTCATCTTATCTTGTTCCAGTTTAAGTATACAAGTTTCCTTCAAAGGGAGTTGTGGTAT AATGAAACTATATGTTGTTGTGCTTGTGGTACTTGGTTAAATAGGATGTCATCGACATAGAGATAAAATAATCACTCATG AGCATAGGAATTTCACCTCTGGGCTCTGGCTAGAAATAGTTAATCTAGATTTATATTTCATTCTATGTCACTTGGCTTCA GGAATTTCACCTCTGGGCTCTGGCTAGAAAGCTCATAGTTATGGTTTCTTTCTCTCCAAGCTTGCTTCTGTCCTCTGCTA AAGCTTTTTTGCCAGTTCCTCTGTAACATAATTTCTTGTGTTTCTGTGTCCCCCCTTTGCGGGGTCTAATTTTCATATTG AAATACCTGCTTTTGATCTTTTGTTCTAATATTTTTTTCTGCTGATCTCTCAGATGTAACTCACTAATAGCAGTATTGCA TGTATGAAACACAGGTTTTGGAGATGATTAGCAATCCACACTATTTGTATCGGATGACCGTTCTTTATGCTATCTCTTTG CTTGCTCCTGTCATGGGCTCTGAAATCACAAGCTCAAAATTATTGCCTGTTGTTGTTGCTGCATCAAAAGACAGGTATTT CAATCTTCTTTAAATTTAAGTGTGGCTCTACTACAGTTTAAGTTTTAGCTTTCAAACTGCTGTCTGTTTGCTTCTGTGTA GAGTACCCAATATTAAGTTCAACGTGGCAAAGGTCTTGGAGTCCATCTTCCCCATAGTTGATCAACCCGTAAGGACCTAA TGTTTCTATTTGTTGAGATTTCCCTATTTTCCTAATATTGTTTTAATTGTAAGTTATATATATATTTCAGTTTAGGAAAC TGCTGTTCTTCAATCCCTATAAGGGATTTAATTTTGTATCAATGTATATATAAGTTCAAATACTGAGAGTTGATCTCTCC AATATGCAGAAGTGATTAATACTACTCGATAGGTCAAAAACTGATTCTGTGAATGTAATTTTCCTTCAGGTTGTGGAAAA GACAATCCGTCCAAGTCTTGTCGAGCTCAGTGAGGATCCTGATGTTGATGTAAGATTTTTTGCCAATAAAGCTCTCACGG CCATTGATCATGTCATGATGTCTAGCTAG
CDS sequence (LotjaGi2g1v0278900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGATGAGCCACTATATCCAATAGCAGTGCTTATAGACGAGCTGAAAAACGATGACATCCAGCTGCGGTTGAACTC AATTCGCAAGCTATCCACGATTGCTCGTGCGCTTGGGGAGGAGCGAACTCGTAAGGAGTTGATACCGTTTTTGGGTGAGA ATAATGATGATGATGACGAGGTGCTTCTTGCAATGGCGGAAGAGTTGGGGGTTTTCATTCCGTTTGTTGGGGGAGTGGAG CATGCCCACGTGTTGCTCCCGCCTTTGGAGACGCTTTGCACTGTTGAGGAAACGTGTGTGAGGGATAAAGCTGTGGAATC ACTTTGTCGAATTGGACCTCAGATGAGGGAGAGTGATTTGGTTGAGTATTTCATTCCTCTGGTCAAGAGATTGGCAGCAG GTGAATGGTTCACTGCCCGAGTGTCTGCATGTGGACTAGTTCATATTGTTTACCCAAGTGCACCAGAAATGTCAAAGACA GAGTTGAGATCAATATACAGTCAGCTGTGTCAAGATGACATGCCAATGGTTAGAAGGTCTGCTGCATCAAATCTTGGGAA GTTTGCTGCAACTGTTGAATATGCTCATTTGAAGGCAGACATCATGTCAATTTTTGAGGATCTTACTAAGGATGATCAAG ACTCCGTTAGATTGTTGGCTGTGGAGGGTTGTGCTGCTCTTGGCAAGCTGTTGGAGCCACAAGACTGTATCACTCACATA CTTCCAGTGATCGTTAACTTCTCGCAGGATAAGTCTTGGCGTGTGCGATATATGGTTGCAAATCAATTGTATGAGCTCTG CGAAGCTGTTGGCCCTGAACCTACCAGAACGGAATTGGTCCCTGCTTATGTGCGGTTGCTTCGAGACAATGAGGCTGAAG TACGGATTGCAGCTGCAGGGAAAGTGACAAAGTTTTGCCGGATTTTAAATCCAGATCTTGCAATTCAGCATATTCTTCCT TGTGTGAAGGAATTGTCATCTGATTCTTCGCAGCATGTTCGCTCTGCTCTGGCATCAGTAATAATGGGAATGGCTCCAGT ATTAGGAAAGGATGCAACAATTGAGCAGCTTCTTCCTATTTTCCTTTCCCTTTTGAAGGATGAATTTCCTGATGTGCGCC TAAACATCATAAGCAAGCTTGATCAAGTGAATCAGGTTATTGGAATCGATTTGTTATCTCAATCTTTACTACCAGCCATT GTTGAGCTTGCTGAGGACAGGCATTGGAGGGTTCGGCTTGCAATCATAGAGTATATACCCTTATTGGCAAGCCAATTGGG GGTTGGGTTTTTTGACGATAAGCTTGGTGCTCTTTGCATGCAGTGGTTACTGGACAAGGTTTGA
Protein sequence (LotjaGi2g1v0278900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVDEPLYPIAVLIDELKNDDIQLRLNSIRKLSTIARALGEERTRKELIPFLGENNDDDDEVLLAMAEELGVFIPFVGGVE HAHVLLPPLETLCTVEETCVRDKAVESLCRIGPQMRESDLVEYFIPLVKRLAAGEWFTARVSACGLVHIVYPSAPEMSKT ELRSIYSQLCQDDMPMVRRSAASNLGKFAATVEYAHLKADIMSIFEDLTKDDQDSVRLLAVEGCAALGKLLEPQDCITHI LPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAAAGKVTKFCRILNPDLAIQHILP CVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAI VELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLLDKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 447 | 446 | 4.0E-299 | – | |
| PANTHER | 2 | 447 | 446 | 4.0E-299 | – | |
| Gene3D | 2 | 447 | 446 | 8.7E-198 | ||
| SUPERFAMILY | 6 | 445 | 440 | 3.6E-78 | ||
| ProSiteProfiles | 8 | 46 | 39 | 9.899 | ||
| ProSiteProfiles | 85 | 123 | 39 | 8.606 | ||
| ProSiteProfiles | 162 | 200 | 39 | 9.056 | ||
| ProSiteProfiles | 201 | 239 | 39 | 9.674 | ||
| Pfam | 240 | 268 | 29 | 1.1E-4 | ||
| ProSiteProfiles | 240 | 278 | 39 | 13.693 | ||
| ProSiteProfiles | 279 | 317 | 39 | 12.878 | ||
| ProSiteProfiles | 318 | 356 | 39 | 12.147 | ||
| ProSiteProfiles | 357 | 395 | 39 | 12.765 | ||
| Pfam | 359 | 419 | 61 | 6.8E-8 | – | |
| ProSiteProfiles | 396 | 434 | 39 | 11.669 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0278900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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