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LotjaGi2g1v0283700.2

Overview

Field Value
Gene ID LotjaGi2g1v0283700
Transcript ID LotjaGi2g1v0283700.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description ABC transporter G family member; TAIR: AT3G25620.2 ABC-2 type transporter family protein; Swiss-Prot: sp|Q7XA72|AB21G_ARATH ABC transporter G family member 21; TrEMBL-Plants: tr|A0A151S095|A0A151S095_CAJCA ABC transporter G family member 14; Found in the gene: LotjaGi2g1v0283700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:75642147..75649772) extracted from Lotus japonicus Gifu genome v1.2.

ATGCTGGGTCCCTCCGGTAGCGGCAAAACCACCTTGCTCACCGCCCTCGCCGGCCGACTCACCGGAAAACTCTCCGGCGA CATCACATACAACAACCAACCTTTCTCCGGCACCGTCAGACGCAGCACCGGGTTCGTCTCCCAAGACGACGTGCTGTACC CTCACCTCACCGTGGTTGAAACACTCACCTACGCCGCTCTGCTGAGACTTCCCCGGAGCCTCACCGTGGAAGAGAAAATG GAGCAGGTGGAGCTGATCATCACGGAGCTGGGGCTCTCGAGGTGCCGGAACAGCCCCGTCGGCGGCGGCGGCGCGTTGTT CCGGGGAATCTCCGGCGGGGAGCGGAAGCGGGTTAGTATCGGGCAGGAGATGTTGGTCAACCCGAGTTTGTTGTTGCTGG ATGAGCCGACGTCGGGCTTGGACGCCACCACGGCACAGCGCATCGTGGCGGTGCTTCGGAGCCTCGCTCGCGGTGGCCGG ACCGTGGTGACCACCATTCACCAACCATCTAGCCGGCTGTATAGGATGTTTGATAAGGTGGTGGTGCTGTCTGATGGATA TCCAATTTATAGCGGGCAAGCGGGTCGGGTCATGGATTATCTTGAATCGGTTGGGTTTGTACCCGCTTTCAATTTTGTGA ATCCTGCTGATTTCCTCATTGACCTTGCAAATGGTAAGTTATTGGATTCAATTTTGATAAATCTTTTTATTTTTGTCTTG GGAATGAATTGATCATTTAATTGAATATGTTGATTTAATGGTTCAACATTTCCTCCCTTGAATACGTGATTGAGGTTTGA ATCTCAACTATTGTAAATAGAAAAAACTCATTAACAAACCCTCTACTGCTTAGTGCGTCGACTGTGGGGCGAGAGATTAA CTCACAGTTACGTGTTTTGGAGTATCTTGATAATGAATTAATCATTTAAAAATATACAAATTATTTTGTGCATGCTAACA TGCCAATGACACAATTGACCAATTAGACAAAGGTCACCCATGCATGTGATGATAATCAAAAGAGTATCTCACACTTGGTC ATTAGTAGGTAAAGGTTCGTTTTCTAAACTAAATAATGGTGGTGCAAAAAGATTGGTGCTAATGGGTAATGGGTCATTAG AAGCAATGAATTGATATTTGACAAGACAATATCAAAATCCCTCTTTGGTCAGCTTCACATCATGTGAGTATTTTATTTCA AGTAAAGTTGGGATCAACACATAAGAAACTTTATACAATGAATGTCAAAGTTGTTCGAAATGGTCCAGTTTCCATGACCA CATAAAGTTTTGTATACAAGATAGGGACATGAGTTTGGAATTAATTAGGACCTTATTACTTCCCTTGAGCCTGGAAATTA CATGTGTCCTGTCCTATCATAGTGCTTTCCAAACGTCACAAATGCTTATATAGAAGGCATTTCCTTCCCCCCTTTTCAAT CAAAAGAGCTTATTATTCTCTTTTAACTTATTTTATATTTGTGTACTTTAACTATCTGTTATTTTGCCTCTTAGGAAAAT GACACTGGTATAGAAACTTATTAGTAGATCTCTCATAGAAATACACTCATTTTCAATTATTTAAAATGATTTTTTCTTTA GTCTAAATGTTATTCAATGACTAGAGCTGTAGAGCATGAGAATTTTTAAAGAATTTGTGAGAATCTACTAGTTTCATTAC GGGAAAATTTATTATGGACCACTTTTGTGTGGTGCAAAGTTGCACCACTCCCTTTTGACTTACAATAACAGGTTTAAAAA AAAAAATCAAAAAACATATTTTCTTAATCTTTAATTAATTATTAGGTTAATTGAATTAGCTTTTCTAGTTCATCTCCCTC AGTGTATCATCTCCATCTATCTCAGTTTCTATGTTCTTCTTCTTCTTTTCTAGTTCATCTTCTTCTTTTCTTCCTCCCAC CCAACAACCACTGCCACCCACAACCCTAAACTCGACCACCCAGTCGCCGCCACCACAACCCTAAACCCCACCACCAACCT ACCACCACCACCACCAACCAGAAACCCAGGACCCACTCACCACAATCAACGCCAGAAACCCAGAACCCGATGAGTTGGCT ACAGGACCTGAAAGTTCTCAAGAAGAGAAGTCCAATGGTGGTTGTCTTGCTTTGAAAAGACGCCAGAAACTCCGGTTGCA GGTCTATGGAAGCTTGCCCAAATCTGGAAACCGCGGTGGAGGCGTTGAAGGTGGGGATGGAGGCGAACCAGTTCTGTTAC CTCGACGGCGAGGCCGTAGGCGGCGGAGAAGGCGAAGCAGGTGGTGGAGTTAAAGGGTCTTCCATTTTGCTTCTTCATCA CCAACAACCTCTTCATCTTCCTCTCCCTTTTACCTTCAACCTTCATTAATTGGAACCCAATCTTCAAATCACCCGATCTA CTTTCCTCATGAGCCCAACAACCAGATCTGACAGTTGCAGGTTGTCTGGGTTCGACGCCTCCTTCTTCCTCTCTGCTTTT CTTCACAGCTTTGTGATTTTTAACATGCTACTCTTGTTGTTAATGTTGTTCGAGATGAAAACTGAGTGGTATTGAATCTG TTTTATCATGAAAGTATAAATTTTGAAGATTTGTGTTAGTTGCCTGTGTTTTTGGATATAGAGTTTGATGATAGAATCAC TGTGCCAGAGGTTTGAATGGGTAAATGGAGTAAAGGGAAATCCAGATCTGGAGATGGAAGGTTGTGTTGAAGGGAGGTTG AATTTTTTGATCTGTGTTGAAGATGGTGTTGTTAGATCTTGTGGCTTGGGCGGTGGTGGTTGGGGTGGATGGTGAGATGA TGAGATTGTGAAAGGTTGAAGATGATCCACTTAGATTTAATCATATTAATTATTCACTAATTATATTAATTTTTGTGATT AATAAATATGTATTTTTATTTTTATTTTAAAACCGGGAAACCTGGACTAGCAGGTCAAAAGGTGGGTGGTGCAACCATGG ACCAGAAAAAACTGGTCCATGTTAAACGGCTCCGTTTCATTACTCTACAAGTTTCTTTGAATTATTGTACTTTTTATCCT CTCAAACCTTTTCCTTAGTTCCTTTCCTAAAGGTAAAAAGCGCCTCTGCGAGAGTAATCTTTCCCTCTCTAATAATGTGG AATGCTTTGAAATTTAGCCTTCAAAAGCTTCTCATAACATTTGGTCCTACACATATGTCAGATTAGCTATGTTAAAAATT TAAGAGTTTTAATTCTGCACTAAACTTAGATGAACCTTTAAGCTCAATTTCCTAGAATTAAACCAGATATGAATGCAGAA ATTATGATGGTTGAAGACTCTTCAAGGGTGGTTATGATTTTACTGGGATTTTCCTAGAATTAAACCAGATATGAATGCAG AAATTATGATGGTTGAAGACTCTTCAAGGGTGGTTATGATTTTACTTGGATTTCTATTACATTGGTCATAAACCCAAAAC ATTGGTAGATAGAGACTGGATTTCTGGAGAAACATGCATACTAATAATGAACCTTCTAATTCTGTAGATACAAGACTTAG ACTCGCGCGTTGCGCGGTTAGAGAAATAACTTTTATTTGGCCATTGCTTTTCTTTGATGGAGTAGAAAGTCACATATAAA ATAAAATACTATAAATGTGTCAATAATATTTTTTAAAAAAGGTGCCAAAAAAATTAAGGAACTTTGATAGCGAGTAATGT GATTGTAGATAACTCTGTTTTCGTGTATGTTAAGTATATTTGAAAATTTAAAAGTATAAAAAAGAAAAGTCACTCTCATT TAGAAATCCTATGATGGACACAATATTTATGTAGTTTAAAAGAAATATGACATTTAGAATCTTGAAAGGTATAAGAAGAT TTGTTGGAAAACATTTATTCTTTTTCTAGATCTAAATTTTTTGAACTTTTTCTTAATCTATTTTTGGGTATTTGCTCATG ATTCTGGTGCGGAAGAAGTTGCAAGACGATCTGCATGAAAAACATTTGTAAATATTAGTAGAAAGTAAAGAGCTGAACTT GTGTCCTATTAAAAACAACTCTAGATCTACTTTTTCTAGTTCACAATTACTTATAAAAACATGAGTCATTCATAAACTGA GAGCAAAATGGTGGAAGGGTTGTAGAAGAAGAAAGAGCATATGCCTTCAAAATTCAGAATCAAGTAACAAAATTTGACAG ATACCTCCCCAAGACATGTTTCCTAGTGCCCATTAGTTGTGGTGTCACTCTTTTCACCATCATGAGCAAATTCCATAATC TCAATCAAACAAACAAAATGCAAGTAAGATAACCCCCAAAGGATAAAAAAAAACAATTTTGCAATGAAAATGTAGAGTAT TTGTGTAACAGGAATAATAACTACAAGATAGCATATTTTATAATTTCAAAATTAGACACATACCAAAGGGATGTCCAGCT TTATAAGTAATATTGAAAATAAAAACTAACAATGTATTCCCAATAGGGGTGTACAAGGGACGGGTTGGGACGGGTTTTGG TTAACCCTAACCCGGCCCTAAATATTGATCGGGTCAATTCATAGACCCTAACCCGTCCCTAGACCCGAAACAACCCGACA TTATGCGGGTCCAATTTGGGACGGGTCTATGTAGGACGGGACCGGGTTGGCCCGAGGGACAATAAGTTTAAGACTATTTG ATACTAATTGTAAGATTTAAAGATAATAACATACTAAAAGAGTTATAAGTTTGAACTATTTTTTAGAAGAAATAACTTGA AATGATCCAATTCTTTCATAATCTATTGCACTTGAGAGGTTTACATTTTGTTTGATCATTTCTTCACTTGTCTCACAAAT GCATAATACACACACATGATTTTCTCTTGTTAGAGCATGAAAGTGTCCATAGTTTGACCAACATTTATTTAATTCATAAG GTAAATGTTAAACATTTTAATTTCATCTACATGGTAAGATAAATTTGAGCATCATGTATCACATTTTAATCATTATAACA AATTAAAATTTTATAAAATATATATGTGGGACGGGTCGGGTGACCCGAGTGTCAACCCGAACCCGACCCTACCCGAAGTC GGGTAACTCAAAGATCAACCCGAACCCGGTCTCTTTTAATGATCGGGCCGGGTTGAACCCGACCCTAAAGGCTTGGGCCG GGACGGGTTGGCGGGTAGGGCCGGGTCTTGTACACCCCTAATTCCCAAAATCAAATAAGCAGTATCATACCAAAGAAATA AGGTAGTCACACTCCTTGTCTGACAAAAAACCTTTGTAGAGAAAGACCCTACAGCAACAGGGACAAAACAACATCAAATG TTGAAATATTAAAAGCAATGTGAGTAAAAAATTGCTAGTATAAGTGAAAAAAATATAAGATCCATTTCAAAAAGAAAAAA TATAAGAGCTGCATAACTTAATGGTTATGGGAAGTTCTAGAAAGTACCTGACCTTGGTTGCCAAGAGATTTGGAAAACAC GAGAGGGATCAACTCTGTTAGAAAAATAAAGAGAGTCTCCTTAAAGCCGCAACTCAGAATCATGTTTGTTCCTTAATTCC TTGCTAGTGCAAAATTATCAATGGCAAAACCAGTGTAAAGCAATGTACTTATATATATATATATATATATATATATATAT ATATATATATATATATATATATATATATATATAGATTGTGAGAAGCAAAATTGGTGAAAAGAGATAAATGGAGAGGAGGA GGAGCAGGGTTAGGAAAAGGGAAAGGGAGGGCATTGGTTCATGAAGAAGGAGTGGTCGTGCAAAAGTGTTTGTAATTCTT TGTATATCTGTGAATGTGATATCAAATTTGCAATTCATTGTGATGCGAATCGTTGCTAGTTTGTGAAGAGGATATTGATT GACAGTTTCAAAATAAATGTTTTAGGTGAAAATTGGAAACGGTTGCTGGGAAAATAAAAAGTTGTGTAAATTAAGAGTGG GGAAAATAACGTAAATGTTTCATGGGTGGACTGATCAATTAGGAGATGAGAATGGGAACGACACTTGATAAAATGGTAGA AGATGACACATAGGATAAAATGCTGAGGTGGACACTTTGGCAAAGAGTGAAAACGTGAGGTGTCAGTTGTCACATTACGC GCTTCACAATTCCTATATTATAATAGATAGATTGTAAATTTGCAGGCATTGTTGCTGATATGAAACCGAATGATAAGATA ACTCACCATGAGGGTCAAGCTTCGATCAAACAATCCCTAGTTTCATCTTACAAAAAGGATTTGTACCCTCTCCTCAAAGA AGAGATTCAGCAGAGTAATAGAGACCAAACATTTTTCACTACAAGAAAATATAGAAGTAAGTGAAATTTTCTAGCTCTCA TGGTATCACTTGTCTTTTATAGCATTAAAGAACAGAGCTATAGACTCCATGGCTGAATTATCTTCATGCTTGTTTTGTAG GTTCTAACAACCAATGGACAGCTAGCTGGTGGGAGCAATTCAAGGTTCTGCTTAAGAGGGGTTTAAAAGAGAGGAGGCAT GAATCTTATTCTGGCTTAAGGATTTTCCAAGTCTTGTCTGTCTCAATTCTCTCTGGACTTCTCTGGTGGCATTCTGATCC CTCACATGTACAAGATCAGGTATTGTGAAACATGTTTTTTTGAGAAAATTCTAAGACAAATGGATGTCAAAGAATAAAAA TCAGTTGAACAATGGATCAAAATCTTTAATTATAGATAATTTGCTTGGTTTATATATTCCATTTCCATTTAGTTTATGTC GGTTCAAGTAGTACATGTTCGATTCCCCTTTAGAAATTATCTCGGATTTGAGTCTTGTGTATGGAAAAAAACTTTTGTTG GCAGAGCTAGCGCCACCAGTATGTAGGTGCTCTTGGCTGGAACATTATTAATTTCGTAGCAGATACTTGTATTAGGCGGG AACCATTTAATTTGAACTAAATACACAAAACAAAGTATTTTTCCCTTGTAATATAGTAGTGCTCATAAGTCATAACATTG TTATACCTGTAACAGGTAGGCCTGCTTTTCTTCTTCTCTATCTTCTGGGGATTCTTCCCTCTGTTCAGTTCCATCTTTGC ATTTCCAATGGATAGTCCAATGCTCAAGAAAGAACAATCATCAGGCATGTACCACCTCTCCTCCTACTACATTTCCAGAA TGGTTGGGGACTTACCAATGGAGCTTGTGCTTCCAACAATCTTTGTAACCATCACCTACTGGATGAGTGGTCTAAAGCCA TCAATGGTTACATTCATGTTAACCCTCTTGATCATGCTTCTGAATGTGCTAGTCTCACAAGGAATAGGCCTGGCACTTGG AGCTATTCTGATGAATGTCAAACAGGCCGCAGCTCTGGCTTCGGTGACAATGCTGGTGTTTCTTCTAGCTGGCGGCTACT ACATTCAACAAACACCATCTTTCATAGCTTGGTTGAAGTACATTTCTTTCAGTCACTATTGTTATAAGCTTCTGGTGGGA GTGCAATTCTCAGCGAATGAGGTTTATGAGTGTGGACCAAGTTTGCATTGTGAGATAAGAGATTTTCCTGCCATAAAGTG TCTCCAGCTTGGTAACATGTGGGATGATGTGGCTGTGTTGGCTATAATGTTGATTGGGTACAGAGTAGTGGCTTATTTAG CTTTGAGGATGGGTCTGCATCATTGA 

CDS sequence (LotjaGi2g1v0283700.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCTGGGTCCCTCCGGTAGCGGCAAAACCACCTTGCTCACCGCCCTCGCCGGCCGACTCACCGGAAAACTCTCCGGCGA CATCACATACAACAACCAACCTTTCTCCGGCACCGTCAGACGCAGCACCGGGTTCGTCTCCCAAGACGACGTGCTGTACC CTCACCTCACCGTGGTTGAAACACTCACCTACGCCGCTCTGCTGAGACTTCCCCGGAGCCTCACCGTGGAAGAGAAAATG GAGCAGGTGGAGCTGATCATCACGGAGCTGGGGCTCTCGAGGTGCCGGAACAGCCCCGTCGGCGGCGGCGGCGCGTTGTT CCGGGGAATCTCCGGCGGGGAGCGGAAGCGGGTTAGTATCGGGCAGGAGATGTTGGTCAACCCGAGTTTGTTGTTGCTGG ATGAGCCGACGTCGGGCTTGGACGCCACCACGGCACAGCGCATCGTGGCGGTGCTTCGGAGCCTCGCTCGCGGTGGCCGG ACCGTGGTGACCACCATTCACCAACCATCTAGCCGGCTGTATAGGATGTTTGATAAGGTGGTGGTGCTGTCTGATGGATA TCCAATTTATAGCGGGCAAGCGGGTCGGGTCATGGATTATCTTGAATCGGTTGGGTTTGTACCCGCTTTCAATTTTGTGA ATCCTGCTGATTTCCTCATTGACCTTGCAAATGGCATTGTTGCTGATATGAAACCGAATGATAAGATAACTCACCATGAG GGTCAAGCTTCGATCAAACAATCCCTAGTTTCATCTTACAAAAAGGATTTGTACCCTCTCCTCAAAGAAGAGATTCAGCA GAGTAATAGAGACCAAACATTTTTCACTACAAGAAAATATAGAAGTTCTAACAACCAATGGACAGCTAGCTGGTGGGAGC AATTCAAGGTTCTGCTTAAGAGGGGTTTAAAAGAGAGGAGGCATGAATCTTATTCTGGCTTAAGGATTTTCCAAGTCTTG TCTGTCTCAATTCTCTCTGGACTTCTCTGGTGGCATTCTGATCCCTCACATGTACAAGATCAGGTAGGCCTGCTTTTCTT CTTCTCTATCTTCTGGGGATTCTTCCCTCTGTTCAGTTCCATCTTTGCATTTCCAATGGATAGTCCAATGCTCAAGAAAG AACAATCATCAGGCATGTACCACCTCTCCTCCTACTACATTTCCAGAATGGTTGGGGACTTACCAATGGAGCTTGTGCTT CCAACAATCTTTGTAACCATCACCTACTGGATGAGTGGTCTAAAGCCATCAATGGTTACATTCATGTTAACCCTCTTGAT CATGCTTCTGAATGTGCTAGTCTCACAAGGAATAGGCCTGGCACTTGGAGCTATTCTGATGAATGTCAAACAGGCCGCAG CTCTGGCTTCGGTGACAATGCTGGTGTTTCTTCTAGCTGGCGGCTACTACATTCAACAAACACCATCTTTCATAGCTTGG TTGAAGTACATTTCTTTCAGTCACTATTGTTATAAGCTTCTGGTGGGAGTGCAATTCTCAGCGAATGAGGTTTATGAGTG TGGACCAAGTTTGCATTGTGAGATAAGAGATTTTCCTGCCATAAAGTGTCTCCAGCTTGGTAACATGTGGGATGATGTGG CTGTGTTGGCTATAATGTTGATTGGGTACAGAGTAGTGGCTTATTTAGCTTTGAGGATGGGTCTGCATCATTGA 

Protein sequence (LotjaGi2g1v0283700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLGPSGSGKTTLLTALAGRLTGKLSGDITYNNQPFSGTVRRSTGFVSQDDVLYPHLTVVETLTYAALLRLPRSLTVEEKM EQVELIITELGLSRCRNSPVGGGGALFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDATTAQRIVAVLRSLARGGR TVVTTIHQPSSRLYRMFDKVVVLSDGYPIYSGQAGRVMDYLESVGFVPAFNFVNPADFLIDLANGIVADMKPNDKITHHE GQASIKQSLVSSYKKDLYPLLKEEIQQSNRDQTFFTTRKYRSSNNQWTASWWEQFKVLLKRGLKERRHESYSGLRIFQVL SVSILSGLLWWHSDPSHVQDQVGLLFFFSIFWGFFPLFSSIFAFPMDSPMLKKEQSSGMYHLSSYYISRMVGDLPMELVL PTIFVTITYWMSGLKPSMVTFMLTLLIMLLNVLVSQGIGLALGAILMNVKQAAALASVTMLVFLLAGGYYIQQTPSFIAW LKYISFSHYCYKLLVGVQFSANEVYECGPSLHCEIRDFPAIKCLQLGNMWDDVAVLAIMLIGYRVVAYLALRMGLHH 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D 1 205 205 5.1E-50
Phobius 1 313 313 -
PANTHER 1 554 554 5.7E-303
Pfam 1 138 138 1.3E-22
PANTHER 1 554 554 5.7E-303
SMART 1 188 188 0.0022
ProSiteProfiles 2 210 209 13.292
SUPERFAMILY 2 203 202 8.07E-42
ProSitePatterns 110 124 15 -
Pfam 293 499 207 1.3E-39
TMHMM 311 333 23 -
Phobius 314 332 19 -
Phobius 333 343 11 -
TMHMM 343 365 23 -
Phobius 344 364 21 -
Phobius 365 393 29 -
TMHMM 386 408 23 -
Phobius 394 412 19 -
Phobius 413 417 5 -
Phobius 418 445 28 -
TMHMM 423 445 23 -
Phobius 446 451 6 -
Phobius 452 471 20 -
TMHMM 452 471 20 -
Phobius 472 532 61 -
Phobius 533 551 19 -
TMHMM 533 555 23 -
Phobius 552 557 6 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Molecular function ATPase activity Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0283700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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