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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0292900 |
| Transcript ID | LotjaGi2g1v0292900.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dihydropteroate synthase, putative; TAIR: AT4G30000.1 Dihydropterin pyrophosphokinase / Dihydropteroate synthase; Swiss-Prot: sp|O04862|FOLM_PEA Folate synthesis bifunctional protein, mitochondrial; TrEMBL-Plants: tr|A0A1J7HKC0|A0A1J7HKC0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0292900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:76729149..76730691) extracted from Lotus japonicus Gifu genome v1.2.
TTTTGGATAATCCAGTCATCACCAATCAGGCTTTCTTTGAACTTTTCTTTTCTTTTTTGCAGGATTGGGGTTTTCATCTC TTCACACAGCTCCAAATTCCTCTGTTGAACTTCACTCACAAGATGAGGAAGTAGTGATTGCTTTGGGAAGTAATGTAGGT AATAGGCTCCTTAACTTTAAGGAAGCCTTGAAGATGATGAGAAACTCAGGCATAAACATCACAAGACATGCTTGCCTTTA CGAGACAGCACCAGCATATGTTACTGACCAACCTCGCTTTATCAACTCCGCAGTAAGAGCTATTACCAAACTCGGGCCAC ATGAATTATTGGCTGCACTCAAACGAATTGAGAAGGACTTGGGCCGTACTGCTGGTATAAGGTATGGTCCAAGGCCAATT GATTTAGACATTTTATTCTATGGTAAATATAATGTCAGGTCTGATACTCTCATTATACCTCATGAAAGAATTTGGGAAAG GCCATTTGTAATGGCCCCTTTGATGGATTTACTGGGATCAGCTATTGACAATGATACAGTTGCTAGCTGGCATTCACTTT CAGGTCATTCTGGTGGACTATCTGCATTGTGGGAAAAATTAGGCGGTGAATCCCTTATTGGAGAGGAAGGTATGTATAGG GTGATGCCCTTTGCTAATGGCTTACTTGACTGGTCACGAAGAACATTGGTCATGGGGATCCTTAATTTGACTCCGGATAG TTTTAGTGATGGGGGAAATTTCCAGTCTGTGGAGTCTGCTGTGTCTCAGGTTCGGTTAATGATATCAGAGGGCGCAGATA TGATTGATATTGGTGCTCAGTCTACTCGGCCGATGGCAACTAGGATCTCTGTTGAAGAAGAATTAGATAGATTAATCCCT GTCCTGGAAGCTGTGATGTCAATGCCAGAGGTAGAAGGAAAGCTCATATCTATTGATACTTTCTACTCTGAAGTTGCTTC AGAAGCTGTGAGTAAAGGGGCTCATCTTATAAATGATGTATCTGCTGGGCAGTTAGATGCGAACATGTTTAAGGTCATGG CAGATCTTGATGTTCCTTATGTTGCGATGCACATGAGGGGGGACCCATGTACAATGCAGAGTAGCGAAAACCTGAAATAT GATAATGCGTGTAAGGAGGTATCCTCAGAATTATACTCACGGGTTAGAGAGGCAGAAATATCAGGAATCCCAGCATGGAG GATTATTATGGACCCTGGTATTGGATTCTCAAAGAAAACTGAAGACAATTTAGATGTCCTCACAGGATTACATGATATCA GAACAGAGATTTCCAATAAAAGTATCGCGATCTCTCATGCTCCTATGCTAATTGGACCCTCAAGAAAGAGATTCTTAGGC GAAATTTGCTCTCGTTCTGCTGCAGTTGAGAGGGATCCTGCTACCATTGCTTCTGTCACAGCTGGTGTGTTGTCTGGGGC TAATATTGTTAGGGTGCATAATGTCAAAGACAATCTAGATGCGGTGAAGCTTTGCGATGCAATACTAAGACAGAGAAGTG CTCCCGTGAAATTTAGACAATGA
CDS sequence (LotjaGi2g1v0292900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAGAAACTCAGGCATAAACATCACAAGACATGCTTGCCTTTACGAGACAGCACCAGCATATGTTACTGACCAACC TCGCTTTATCAACTCCGCAGTAAGAGCTATTACCAAACTCGGGCCACATGAATTATTGGCTGCACTCAAACGAATTGAGA AGGACTTGGGCCGTACTGCTGGTATAAGGTATGGTCCAAGGCCAATTGATTTAGACATTTTATTCTATGGTAAATATAAT GTCAGGTCTGATACTCTCATTATACCTCATGAAAGAATTTGGGAAAGGCCATTTGTAATGGCCCCTTTGATGGATTTACT GGGATCAGCTATTGACAATGATACAGTTGCTAGCTGGCATTCACTTTCAGGTCATTCTGGTGGACTATCTGCATTGTGGG AAAAATTAGGCGGTGAATCCCTTATTGGAGAGGAAGGTATGTATAGGGTGATGCCCTTTGCTAATGGCTTACTTGACTGG TCACGAAGAACATTGGTCATGGGGATCCTTAATTTGACTCCGGATAGTTTTAGTGATGGGGGAAATTTCCAGTCTGTGGA GTCTGCTGTGTCTCAGGTTCGGTTAATGATATCAGAGGGCGCAGATATGATTGATATTGGTGCTCAGTCTACTCGGCCGA TGGCAACTAGGATCTCTGTTGAAGAAGAATTAGATAGATTAATCCCTGTCCTGGAAGCTGTGATGTCAATGCCAGAGGTA GAAGGAAAGCTCATATCTATTGATACTTTCTACTCTGAAGTTGCTTCAGAAGCTGTGAGTAAAGGGGCTCATCTTATAAA TGATGTATCTGCTGGGCAGTTAGATGCGAACATGTTTAAGGTCATGGCAGATCTTGATGTTCCTTATGTTGCGATGCACA TGAGGGGGGACCCATGTACAATGCAGAGTAGCGAAAACCTGAAATATGATAATGCGTGTAAGGAGGTATCCTCAGAATTA TACTCACGGGTTAGAGAGGCAGAAATATCAGGAATCCCAGCATGGAGGATTATTATGGACCCTGGTATTGGATTCTCAAA GAAAACTGAAGACAATTTAGATGTCCTCACAGGATTACATGATATCAGAACAGAGATTTCCAATAAAAGTATCGCGATCT CTCATGCTCCTATGCTAATTGGACCCTCAAGAAAGAGATTCTTAGGCGAAATTTGCTCTCGTTCTGCTGCAGTTGAGAGG GATCCTGCTACCATTGCTTCTGTCACAGCTGGTGTGTTGTCTGGGGCTAATATTGTTAGGGTGCATAATGTCAAAGACAA TCTAGATGCGGTGAAGCTTTGCGATGCAATACTAAGACAGAGAAGTGCTCCCGTGAAATTTAGACAATGA
Protein sequence (LotjaGi2g1v0292900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMRNSGINITRHACLYETAPAYVTDQPRFINSAVRAITKLGPHELLAALKRIEKDLGRTAGIRYGPRPIDLDILFYGKYN VRSDTLIIPHERIWERPFVMAPLMDLLGSAIDNDTVASWHSLSGHSGGLSALWEKLGGESLIGEEGMYRVMPFANGLLDW SRRTLVMGILNLTPDSFSDGGNFQSVESAVSQVRLMISEGADMIDIGAQSTRPMATRISVEEELDRLIPVLEAVMSMPEV EGKLISIDTFYSEVASEAVSKGAHLINDVSAGQLDANMFKVMADLDVPYVAMHMRGDPCTMQSSENLKYDNACKEVSSEL YSRVREAEISGIPAWRIIMDPGIGFSKKTEDNLDVLTGLHDIRTEISNKSIAISHAPMLIGPSRKRFLGEICSRSAAVER DPATIASVTAGVLSGANIVRVHNVKDNLDAVKLCDAILRQRSAPVKFRQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 441 | 441 | 7.9E-207 | – | |
| Gene3D | 1 | 126 | 126 | 2.0E-37 | ||
| CDD | 1 | 106 | 106 | 1.12792E-48 | ||
| PANTHER | 1 | 441 | 441 | 7.9E-207 | – | |
| SUPERFAMILY | 5 | 113 | 109 | 5.62E-34 | ||
| TIGRFAM | 5 | 106 | 102 | 1.1E-28 | ||
| Pfam | 9 | 106 | 98 | 1.5E-25 | ||
| ProSitePatterns | 63 | 74 | 12 | - | ||
| Gene3D | 147 | 443 | 297 | 3.5E-104 | ||
| SUPERFAMILY | 153 | 440 | 288 | 9.03E-86 | ||
| ProSiteProfiles | 164 | 432 | 269 | 73.805 | ||
| CDD | 164 | 435 | 272 | 6.67605E-121 | ||
| TIGRFAM | 166 | 436 | 271 | 7.8E-84 | ||
| ProSitePatterns | 166 | 181 | 16 | - | ||
| Pfam | 167 | 422 | 256 | 1.1E-83 | ||
| ProSitePatterns | 200 | 213 | 14 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity | Catalysis of the reaction: 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine + ATP = (2-amino-4-hydroxy-7,8-dihydropteridin-6-yl)methyl diphosphate + AMP + 2 H(+). | ||
| Molecular function | Dihydropteroate synthase activity | Catalysis of the reaction: 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate + 4-aminobenzoate = diphosphate + dihydropteroate. | ||
| Biological process | Folic acid-containing compound biosynthetic process | The chemical reactions and pathways resulting in the formation of folic acid and its derivatives. | ||
| Biological process | Pteridine-containing compound metabolic process | The chemical reactions and pathways involving any compound containing pteridine (pyrazino(2,3-dipyrimidine)), e.g. pteroic acid, xanthopterin and folic acid. | ||
| Biological process | Cellular metabolic process | The chemical reactions and pathways by which individual cells transform chemical substances. |
Expression pattern of LotjaGi2g1v0292900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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