Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0304800 |
| Transcript ID | LotjaGi2g1v0304800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Haloacid dehalogenase-like hydrolase domain-containing protein 3; TAIR: AT1G14310.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9CYW4|HDHD3_MOUSE Haloacid dehalogenase-like hydrolase domain-containing protein 3; TrEMBL-Plants: tr|I1J5P8|I1J5P8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0304800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77816909..77820763) extracted from Lotus japonicus Gifu genome v1.2.
AATAATAATGTTAAAATAAAACCCCTGGTGCCCGACCCGGCATGATCCCGGTTCATGTGGGTGGGTCAAAGCTGGTGGTG GGTTTGGAAACAACCCAGTTCCGGCGGGTTGACCCGCCCCCGAACCCGTTTTGGCGTTCGTAGGAGGGGTTGGAGAAGAA AACAAAATGCAGAACTCGTCTTCTTGTGCAACCAAGAACAGAAGACGACGATGTGCACTGCTCTGACGCGATGCTCTCAC GCCAACGCTCTCTTCAGACCTCTCACCATGCCCAAACCCCGCAATTCGCACCTTCACCTCTCATCTTCATCCGCCATCAA CAACAAAGGTCGATTGTGAACATGTAATGAATGATTGATTGATGTGTTTTTTCAGCTGATGTTGAAGTGTTCTCTCTCTC TCTCTTTGATCAGGATCAGGATCAAGATATGATGCATTGCTGTTGGATGCTGGAGGCACCCTCTTGCAATTGGCCAACCC AGTTGAGGACACCTACGCCGCCATTGGAGCCAAATATGGTTTGCATCTGAGTCCTTCTGAGATCAAACAAGGGTTTAAGA GAGCATTTTCTGCTCAATGGCCTCAAAAGCTACGTTACCAGGTCTATGCTGCTCTTGCTCCACTGTTCATTTGTTTCTTA TTGTAATTTTTTGCCCAGTAATTAAGTTTAGCAAACATATTGCAAGTTTTCATATATTTGTAGTGATTTAGTAACTAGTA CTTAGCAAATTGGGCTTATAATTATAGTATTTTTTTCTTATATGCAAGCCGGGCAACTTAACAACTTAACTAACATGATA TGCAATTTGGCATGATTTGCTTACCTTCTGTGTCATTTCATTTGAAGCCAACTTTACGTTATAGCCATTCCTGGGGTATT GTTGTCACTGATTCTCCATGTGTGTACATATTTGTTGATGTCAAACTTAAGCACATTGTAAATTTCTTTTGACGAAATAT GTAAACAGATAGCCATTTCATGAGTAAATGGTGTTATTATGGATTTATGGGTGGTAGTATAAAATCTTTTTGTATTCACT ACAGGGAGATGGGAGGCCATTTTGGAAATTTGTGGTTTCTGAAGCCACTGGTTGTGGAAATGAAGATTATTTTGAGGAAG TTTATGAGGTAATCTTTCTTGGTAGCAGACTATCCTATTTGTCATTCCCTTTTATCTAGCTATAGAATGCTTTGATCTTT TTGAAAAAAATCAATTTATACGTATTAAAATGATTTAAAGTAGATTCCAATTTCCCTATGCTTTTCATCAGCACCTCAAA CATGACTTAAGTATTATGTATGATCTACTGGTTTTTACGTTGTAGACTTCTGGTCTTCCTCGTTGATTCCAGAATGTTTT TGTCATTTATAGATTAGATATTATTGCTTGCTTACCAAGGAAAAATAATTTGGCAGGAGAGTGTTTTAAAAGTTGTTGGC TTTTATTTTCCAATTAATAATATGAGATAAACTTATGTCTGAACAAGTATTGTTCATGATAGTACTATGCAAAAGGTGAT GCATGGCATCTTCCAGATGGAGCTCATGAAGCAATTACTCTTCTCAAGGATGCTGGAGGTCATATAAATTAAATATTTCT TTTATCCCAAACTGTGCTAACTTTGTTGACCCTGTAAGTTATCTACATTCTTTGAACTTTGTCCTTGCTAACACGACAAG CAGTGACGCAGTTAAGATGGCTGTTGTATCCAATTTCGACTCCCGCTTAAGGAATCTATTGAAGGATCTTGATGTTTTAA ATCTGTGAGCCTCTGTCATTCCTTCAATATGTTTATAATTTTTGGATTCTATTGACATCTTTTGGGGAGGTGTTCATCAA ATAGTGGCTGTTGAACCTCTTATATTGCAGAAATCTCCCAAAGTCTGAATAATTCACCTTATACATAATATTTAATGTTC AATTTTCTGCTTTTCATGTTAGATTCGATGCTGTCATTATATCATCAGAGGTTGAATATGAAAAACCAGACCCAAGAATA TTTCAAGCAGCTCTAGGTGATGGTTATTAGTTACTCGCTTACAGACTTTATTTGCTAAAAAAATGTTAAATGGTCTATTG ACTGCTGAACATGAGTATGATTCTTATATTACCACCTCCTCCCCTGCCATTTCTTAGCATAAATTAAAGAGCAATCATGA CATCTTTAGTGTTTTCGTATGGAACAATGAGATATTATAATCATATTTTCCTTTAGTTGTCAGTTCAAAACCATTTTCCC ATATTTGTCTTCAATTTGCATCTTTTTAATTTCTAATGCTGCAAGTGTGTTTGATAGTTAGATATGCTATATGAAAAAAC TAGTATCAAAACCAAACATCATTTTTCATTTCTTTTCAGAATAAAATTTATATTATAGCTCTGCTAGAGTAACACTTGTA AGAACAATTCAACAACAATAACCATGCTTATCCCGCTATGTGGGTCTTGTAAGAAACAATGAGACAGTAAATGGATAATC ATCATAGTATATTGACTTTTATTGGATATGGCTTATATTTTTTCCTGTCATTTACCTGCAAAATAAAATAAAATTAGCAA ATATCCTTTCCTTAAGAATGCAGCAAGTCATTTTCTCTCATGGAATTGAAGTAAAGAAAATGTCATTGTTTGCTGTCATT TAGCCTTTTTATTTTGGCAATAATGTGTAATTGAGTCTCATTACCAATGTTTTCCTAGATCAACTAAATGTAGAGGCTTC CAAAGCCATACACATTGGAGATGATGAAAAGGCAGATAAATTCGGTGCGAATGCTGTGGGGATAGATTGCTGGTTAGAGC TTTCTCGTCTGAAGTGATCATTGCTTGTGTTTACTGATGGAAATGTCTCAGTGGCTGATCATTCCATTTAATTCTTATTT ACTGAATTATAGATTATTTTATCTATTACTAAATGTTTCCTTGTCAAAGCAGGTTATTGGGTACTGATGTGAAGACATTC TCTGAGATACACATCCGCATCCTTAACTCACAGGCATAATTTTTACTCGTAAGCATCGGTCAATAGGAAGTCATTGAAGT TTTTCCCTTTGGTTGCCTCGTTTCTGCTATTGCTTTTAATGTAATCTGTAGCTCTGATTTGTCATAGTGATGCCTACCAT TTGATCGGGCGATATGAGTAATGCTATCCTCCTTAAATTTTCATACACGGGGCATAAACATTGTTGTGATGAACTTGGTA GCTAAGTTTTGCCTCCCAAATTTCATTTGCTGTTCTACGAACAGCAGGAGACAAGTTCATTACCACTTTTATGTAACCCT TTACTTTTTTTGTGTTATAATATGTTTAGATCAACTTCTCTTTCCTCGAATTGTTTTAAAAATCTAGCATCCAGAAACTG TTTTAAAAATTTTCTCCTAAAATTGATTTTAGCTTTAGAATTACTCATATCTGAGATGCCCGATTCTCCGAAGTTCTATC ATCAATGACTGTAAGCAAACGATCTGTTATGAAAGGTGTAATGAGAAAAGGATACAGGTATCTTTTTTTGCTCGAATTGG ACATACCAGTTTGTATGCATGTTAATAATGATGAACACAAATTTGAAGGGCATGTTTCGTGAGAATCAAGTCAATCAACA GATAAATGGTTTTTGGTAGACATATGTTTGTTGGCCACCTAAGGGAGAAAAGACAAAATAATACGATAATAGCTTTTGTG GATTGCCTTTTGAAGTGAACATATTTTCATGTTGAAGTAAATTGATACACACACATGGAGAAGCACATTAAAAAAAGAAG GTAAAAAGAGCATATGAACGCTAATGGATTCTCTCATGTCCCGTAATATTATGTTAAACTTGTTTTTTTATAACATGAGA GGATTCCGATCTATG
CDS sequence (LotjaGi2g1v0304800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGGTGGGTCAAAGCTGGTGGTGGGTTTGGAAACAACCCAGTTCCGGCGGGTTGACCCGCCCCCGAACCCGTTTTGG CGTTCGTAGGAGGGGTTGGAGAAGAAAACAAAATGCAGAACTCGTCTTCTTGTGCAACCAAGAACAGAAGACGACGATGT GCACTGCTCTGACGCGATGCTCTCACGCCAACGCTCTCTTCAGACCTCTCACCATGCCCAAACCCCGCAATTCGCACCTT CACCTCTCATCTTCATCCGCCATCAACAACAAAGGATCAGGATCAAGATATGATGCATTGCTGTTGGATGCTGGAGGCAC CCTCTTGCAATTGGCCAACCCAGTTGAGGACACCTACGCCGCCATTGGAGCCAAATATGGTTTGCATCTGAGTCCTTCTG AGATCAAACAAGGGTTTAAGAGAGCATTTTCTGCTCAATGGCCTCAAAAGCTACGTTACCAGGGAGATGGGAGGCCATTT TGGAAATTTGTGGTTTCTGAAGCCACTGGTTGTGGAAATGAAGATTATTTTGAGGAAGTTTATGAGTACTATGCAAAAGG TGATGCATGGCATCTTCCAGATGGAGCTCATGAAGCAATTACTCTTCTCAAGGATGCTGGAGTTAAGATGGCTGTTGTAT CCAATTTCGACTCCCGCTTAAGGAATCTATTGAAGGATCTTGATGTTTTAAATCTATTCGATGCTGTCATTATATCATCA GAGGTTGAATATGAAAAACCAGACCCAAGAATATTTCAAGCAGCTCTAGATCAACTAAATGTAGAGGCTTCCAAAGCCAT ACACATTGGAGATGATGAAAAGGCAGATAAATTCGGTGCGAATGCTGTGGGGATAGATTGCTGGTTATTGGGTACTGATG TGAAGACATTCTCTGAGATACACATCCGCATCCTTAACTCACAGGCATAA
Protein sequence (LotjaGi2g1v0304800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWVGQSWWWVWKQPSSGGLTRPRTRFGVRRRGWRRKQNAELVFLCNQEQKTTMCTALTRCSHANALFRPLTMPKPRNSHL HLSSSSAINNKGSGSRYDALLLDAGGTLLQLANPVEDTYAAIGAKYGLHLSPSEIKQGFKRAFSAQWPQKLRYQGDGRPF WKFVVSEATGCGNEDYFEEVYEYYAKGDAWHLPDGAHEAITLLKDAGVKMAVVSNFDSRLRNLLKDLDVLNLFDAVIISS EVEYEKPDPRIFQAALDQLNVEASKAIHIGDDEKADKFGANAVGIDCWLLGTDVKTFSEIHIRILNSQA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 54 | 308 | 255 | 1.9E-128 | – | |
| PANTHER | 54 | 308 | 255 | 1.9E-128 | – | |
| SUPERFAMILY | 97 | 297 | 201 | 5.71E-37 | ||
| SFLD | 97 | 293 | 197 | 1.1E-25 | – | |
| SFLD | 97 | 293 | 197 | 1.1E-25 | – | |
| PRINTS | 97 | 108 | 12 | 4.1E-11 | ||
| TIGRFAM | 100 | 289 | 190 | 2.3E-53 | ||
| Gene3D | 101 | 292 | 192 | 2.9E-48 | ||
| Gene3D | 113 | 185 | 73 | 2.9E-48 | – | |
| PRINTS | 137 | 150 | 14 | 4.1E-11 | ||
| Pfam | 172 | 287 | 116 | 1.3E-18 | ||
| CDD | 196 | 305 | 110 | 7.33548E-39 | – | |
| TIGRFAM | 201 | 284 | 84 | 1.3E-12 | ||
| PRINTS | 203 | 216 | 14 | 4.1E-11 | ||
| PRINTS | 233 | 249 | 17 | 4.1E-11 | ||
| PRINTS | 251 | 271 | 21 | 4.1E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi2g1v0304800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…