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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0322300 |
| Transcript ID | LotjaGi2g1v0322300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT1G60800.2 NSP-interacting kinase 3; Swiss-Prot: sp|Q93ZS4|NIK3_ARATH Protein NSP-INTERACTING KINASE 3; TrEMBL-Plants: tr|A0A0B2PZL4|A0A0B2PZL4_GLYSO Protein NSP-INTERACTING KINASE 3; Found in the gene: LotjaGi2g1v0322300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:79709553..79713670) extracted from Lotus japonicus Gifu genome v1.2.
GAGGAACATTGTAAATTGATAATTTATGGTCATTGAGCATATTGGCAAATTTAGTTATGTTGGAAATTAGTTGGCATGAT AGTAGGAAACTTAATTTTGATGCTACTTTTTTTACATATTTTCCTTTTTTCTTTTCCTGGAGAATTGAAGTACTATCTAA TTCCCTATCATAAAGCAGCAGAGATTTTTCATATGGAAGTTCTTACACTTTTTTGTTTATTCCTTGAACAGTTGTAGCTC TGATAAAGATAAAGGATGAGTTGAATGATCCTCACAATGTCCTGGAGAATTGGGATATTAATTCAGTGGATCCATGCAGC TGGGGCATGATTACTTGTTCTCCAGATGGCTTTGTTTCTGCATTGTGAGTTGTTTAGATTTTATATGTTTTTAAAGGTGG CAAACAAGTTTCAAAAGGTCTTGAATATAAAATGAACCAAAAACACTTTTGCTAATTTGATTTTCACTGAAAGGAAGTTC TTACTTGCAGGGGATTGCCTAGTCAGAATTTGTCTGGGACACTGTCTCCTTGGATTGGAAACCTTACTAACTTACAATAT GTGTAAGTCTATGTTAACTTTTATAAAGATCCTTCATATATGGGTTTTGCATCAGTGCTTTTATTCTTATAGTTCCACTA CATAGAGTGAAGACTTCCCAAGGAGTTATAAGCCAAGTGCAGGCCAACCACATTGATGCTTAAATAATTGTACCAATATG CAGTTATCTTCAGAACAATTCCATTTCTGGTCAGATTCCAGCAGCAATTGGAAGCCTAGAAAAGCTTCTGACACTTGATC TCTCCAATAATGCATTTAGTGGTGACATACCTAATTCTTTGGGAGACCTCAAGAACCTGAATTATTTGTAAGTTACAAAA GCATATACATCATGCAGATTGTTAAATTGTTAATCATTGCAGCTATTGTGAGTTTGTTACTTGCTTCAGTGGTGACTTAT GAGTTATGAAATTGTGTTCCTCATTCTATTTAAATTGTCTCATGTGCATGCTAGGCGGTTAAATAATAACAGCCTTACAG GAGCCTGCCCTCAGTCTCTTAGCAACATTGGAGGTCTAACCCTTGTGTATGTCTTTGTTATCTATTTGCTCCATTGTTTT CTTTTCTTTCTCTTTTTCTTTTTCCTGTTGTATTTCTCTTACACCTCTCAAGGGAAGATTTAAAGTTTTGTTTTCTCTCT TAAAAAATGATATATTAACTATTATGAACTGAAAATACATGTAGGGACCTCTCCTACAACAATCTGAATGGTTCTTTGCC ACGAATATCGGCAAGAACGTTAAAGTAAGTTCATCTTGGGTTTCCTAATCTTTAATTCCATATTCAAGTTTACTTCAAAG TGGTGTGGTTAATCTCTTGCTCAATTTTTCACTTCAGGATTGTGGGTAACCCATTAATTTGTGGTCCAAAAGCAAACAAT TGTTCTACTGTTTTACCAGAGCCACTTTCCTTCCCACCAGATGCACTCAGAGGTATTAATAACATGTATCTTTGCCTCTA CTTTCAATTTTCACATTTCTAACAATTGTTTGACATGCTTAGATGTGATGATTTTGACTTTCTAGCCCAATCAGACTCTG GTAAAAAAAGCTATCATGTGGCACTTGCTTTTGGTGCAAGTTTTGGTGCTGCTTTTGTCATTGTGATTATAGTTGGGTTT CTTGCTTGGTGGCGATATAGACACAACAAACAGATATTCTTTGATGTTAATGGTTAGTCCATGCTAAAAATTTCCCTACT TTCCTTCTATACTTCTATTTCCTTAAATCGCTGCATTTTTTTAACTCACATGTTCAAATGCTTGTTTCTTTTCATGGTTG ACATTGTGAAAGTTAATTGACATGTTCTAATTTCACCTAAGACTAGTCTAAGTCACCTCCAATGGATCTATGTATGCTTC TAAGTTCTAACTCAAGCAATTCATTTTATTATTCCTCGACTATTTTTAATTAATTTCAACGATTTTAAGCTCATTAAAGC AACTGTAAAACTTATCAAGCATGAAATGAAGTATGAATATGAGATCTTTTTTCCTAGTGATTTTTTTTTTCAACATGAGC AATTAAATTATCCCAGTTTTGTTTTTGCTTGAAAAAATGGATGGGAGTCCTATATGTAAAATTTAAATTGGAGTACACTT AATCTATAGGAGGGGTAGAATTTGAGAATTAACATTGTAGCTGGTGGTTTTTTAAAATCTTAATCCAAGTATCAAGTTTG CATTATCATGCCATGCTATCACTGAGCACACCACTGATATGGATTCACTCCCTACATGCCTTGTAAGCATATGTTGAGTT CCCACAACATGAATTCTAAAGTCCTCGTTTCCTTATGTCTTTGTTTGGTATTTAATTTATACAGGAGTAGTGTTGTTGTG GGTATGTTTTTTTCTTTTATTTGGATCCTCTTTTCTATGATTTCTCAGTAAAAGTCTGTTATCTGGCAGAGCATTACGAC CCAGAGGTGCGCCTTGTTGGTCACTTAAAAAGGTTTTCATTCAAAGAACTACGAGCTGCGACAGACCATTTCAACTCAAG GAACATTCTGGGAAGAGGTGGCTTTGGAATAGTTTACAAGGCGAGCTTGAATGATGGGTCTGTTGTGGCTGTTAAAAGGT TGAAGGACTATAGTGCAGCAGCTGGTGAGATCCAATTTCAAACAGAAGTCGAGACGATAAGTTTGGCTGTCCACCGGAAT CTTCTGAGGCTTAAAGGGTTTTGTAGCACTCAGAATGAAAGGCTCCTCGTTTATCCCTATATGTCTAATGGCAGTGTTGC CTCTAGATTAAAAGGTAAGCTCATTTCTTCTATGAAGGTGTCTCTCTTTTCAGTTTTTAGTTCTCCTTTACCGTATCTTT GTTTTGTGTGTGTTTTTCTAAGCAAACATTTTCTTGATCGGCTTATGATTGAGATTGATAATTATACTCAAGTTCCTCAA GACCATTTGAAAATGTACCTTACTCTGGCTTTGGTTTTGGGTTTATGTACCAGATCATATTCATGGTAGGCCAGCTTTAG ATTGGACAAGGCGGAAGAGAATAGCTTTAGGTACAGCACGAGGGTTGGTTTATTTGCACGAGCAATGTGACCCTAAAATT ATCCACCGTGATGTCAAAGCAGCCAACATATTGCTAGATGAAGACTTTGAAGCAGTTGTTGGTGATTTTGGTTTAGCTAA GCTTTTGGATCACAGAGATTCCCATGTGACCACTGCGGTGCGTGGCACCGTTGGTCATATTGCTCCGGAGTACCTGTCTA CCGGCCAATCATCGGAAAAGACTGACGTGTTTGGATTTGGAATCTTGCTGCTTTAGCTGATCACAGGTCATAAGGCTCTA GATTTTGGGCGAGAAACAAACCAGAAAGGTGTCATGCTAGATTGGGTACTCTCTTTTTCTAGACTTCCACTCTTCTTAAC ATCTTGCTTCTTTTTCAGTTAGCATATGAAGCTTTTACTAGCTATAGAAGCTTTTACTCGCTATAGGCTTTCAGTTAGCA TATGAAGTTCTTACTAGCTCTAGAAGTATATTTATTCCATCAACTTAGGTTGAATGGTTCGTTGGCGCTCTGAATAATTT TTCTCTTATGTGGCATAGCTTGTCTTCAGAGAAATTTAACTCAAGTAGTTTTCTTCTTAAATGGCACTGGGGATTAAGAA ATATTGCCACTTAACTGCTATTTATTTCTTGCTTTAGGTAATAGGCTTAAAAAATAAGTTCTCTTTCGCCTCAATCCCCA ATCTTTTGTATAATGTGAATCAAACAATTTTCAGGTTAAGAAGCTCCACCAAGAGGGAAGATTAAGTCAAATGGCAGATA AAGTGCTGAAGGGAAATTTTGACCTTGTTGAATTGGAAGAAATGGTTCAGGTTGCACTCTTGTGTACACAGTTTAATCCT ACAACCCGCCCCAAAATGTCTGAAGTATTAAAGATGTTGGAAGGGGATGGCTTAGCTGAGAGATGGGAGGCCTCACAGTC ACAGAGGATTGAAACACCAAGGTTCCGGTCTTGTGAAAATCCGCCTCAAAGATACGCAGATTTAATAGAAGAATCATCAC TCATAGTAGAAGCCATGGAGCTTTCTGGCCCTAGGTGA
CDS sequence (LotjaGi2g1v0322300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTACTTGTTCTCCAGATGGCTTTGTTTCTGCATTGGGATTGCCTAGTCAGAATTTGTCTGGGACACTGTCTCCTTG GATTGGAAACCTTACTAACTTACAATATGTTTATCTTCAGAACAATTCCATTTCTGGTCAGATTCCAGCAGCAATTGGAA GCCTAGAAAAGCTTCTGACACTTGATCTCTCCAATAATGCATTTAGTGGTGACATACCTAATTCTTTGGGAGACCTCAAG AACCTGAATTATTTGCGGTTAAATAATAACAGCCTTACAGGAGCCTGCCCTCAGTCTCTTAGCAACATTGGAGGTCTAAC CCTTGTGGACCTCTCCTACAACAATCTGAATGGTTCTTTGCCACGAATATCGGCAAGAACGTTAAAGATTGTGGGTAACC CATTAATTTGTGGTCCAAAAGCAAACAATTGTTCTACTGTTTTACCAGAGCCACTTTCCTTCCCACCAGATGCACTCAGA GCCCAATCAGACTCTGGTAAAAAAAGCTATCATGTGGCACTTGCTTTTGGTGCAAGTTTTGGTGCTGCTTTTGTCATTGT GATTATAGTTGGGTTTCTTGCTTGGTGGCGATATAGACACAACAAACAGATATTCTTTGATGTTAATGAGCATTACGACC CAGAGGTGCGCCTTGTTGGTCACTTAAAAAGGTTTTCATTCAAAGAACTACGAGCTGCGACAGACCATTTCAACTCAAGG AACATTCTGGGAAGAGGTGGCTTTGGAATAGTTTACAAGGCGAGCTTGAATGATGGGTCTGTTGTGGCTGTTAAAAGGTT GAAGGACTATAGTGCAGCAGCTGGTGAGATCCAATTTCAAACAGAAGTCGAGACGATAAGTTTGGCTGTCCACCGGAATC TTCTGAGGCTTAAAGGGTTTTGTAGCACTCAGAATGAAAGGCTCCTCGTTTATCCCTATATGTCTAATGGCAGTGTTGCC TCTAGATTAAAAGATCATATTCATGGTAGGCCAGCTTTAGATTGGACAAGGCGGAAGAGAATAGCTTTAGGTACAGCACG AGGGTTGGTTTATTTGCACGAGCAATGTGACCCTAAAATTATCCACCGTGATGTCAAAGCAGCCAACATATTGCTAGATG AAGACTTTGAAGCAGTTGTTGGTGATTTTGGTTTAGCTAAGCTTTTGGATCACAGAGATTCCCATGTGACCACTGCGGTG CGTGGCACCGTTGGTCATATTGCTCCGGAGTACCTGTCTACCGGCCAATCATCGGAAAAGACTGACGTGTTTGGATTTGG AATCTTGCTGCTTTAG
Protein sequence (LotjaGi2g1v0322300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MITCSPDGFVSALGLPSQNLSGTLSPWIGNLTNLQYVYLQNNSISGQIPAAIGSLEKLLTLDLSNNAFSGDIPNSLGDLK NLNYLRLNNNSLTGACPQSLSNIGGLTLVDLSYNNLNGSLPRISARTLKIVGNPLICGPKANNCSTVLPEPLSFPPDALR AQSDSGKKSYHVALAFGASFGAAFVIVIIVGFLAWWRYRHNKQIFFDVNEHYDPEVRLVGHLKRFSFKELRAATDHFNSR NILGRGGFGIVYKASLNDGSVVAVKRLKDYSAAAGEIQFQTEVETISLAVHRNLLRLKGFCSTQNERLLVYPYMSNGSVA SRLKDHIHGRPALDWTRRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAV RGTVGHIAPEYLSTGQSSEKTDVFGFGILLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 169 | 169 | - | – | |
| Gene3D | 1 | 147 | 147 | 4.2E-41 | ||
| SUPERFAMILY | 10 | 137 | 128 | 2.04E-28 | – | |
| Pfam | 32 | 92 | 61 | 5.0E-9 | ||
| PANTHER | 53 | 431 | 379 | 1.6E-173 | – | |
| PANTHER | 53 | 431 | 379 | 1.6E-173 | – | |
| Phobius | 170 | 196 | 27 | - | – | |
| TMHMM | 174 | 196 | 23 | - | – | |
| Phobius | 197 | 431 | 235 | - | – | |
| Gene3D | 205 | 313 | 109 | 2.2E-34 | – | |
| SUPERFAMILY | 217 | 431 | 215 | 2.73E-64 | ||
| ProSiteProfiles | 237 | 431 | 195 | 34.817 | ||
| SMART | 237 | 431 | 195 | 1.3E-11 | ||
| Pfam | 239 | 430 | 192 | 4.1E-39 | ||
| ProSitePatterns | 243 | 265 | 23 | - | ||
| Gene3D | 314 | 431 | 118 | 2.7E-40 | – | |
| ProSitePatterns | 360 | 372 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0322300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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