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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0349600 |
| Transcript ID | LotjaGi2g1v0349600.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter G family member; TAIR: AT1G31770.1 ATP-binding cassette 14; Swiss-Prot: sp|Q9C6W5|AB14G_ARATH ABC transporter G family member 14; TrEMBL-Plants: tr|I1J884|I1J884_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0349600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:82631962..82634724) extracted from Lotus japonicus Gifu genome v1.2.
TTTGAGGAATTGCTGTACAAAGTTAAACTAGAGCAGAAAAGAATGTGTTGGGGCAGTAAAGGGAGTTGCAAAGAGAAAAC AATACTGAATGGAATCACAGGCATGGTGTGTCCTGGAGAAATTCTAGCTATGTTGGGGCCATCAGGTAGTGGTAAAACCA CACTTCTCACAGCTCTGGGAGGGAGACTCAATGGTAAACTATCTGGAAAAATCACATATAATAATCAACCTTTCTCTGGT GCCATAAAAAGAAGAACAGGTTTTGTGGCTCAGGATGATGTGCTTTACCCTCACCTCACAGTCACTGAAACTCTAGTGTT CACTGCACTTCTGAGGCTGCCAAAAACATTGACCAGAGATGAAAAAGTTCAGCATGTGGAGAGAGTTATCACTGAGCTAG GACTGAGTGGTTGCAGAAGCAGCATGATTGGAGGACCTCTTTTGAGAGGGATATCAGGTGGTGAGAAAAGGAGGGTGAGC ATAGGACAAGAAATGCTCATCAATCCAAGCCTGTTGTTGCTGGATGAGCCAACTTCAGGTTTGGATTCCACCACTGCTTT GAGGATTCTCAACACCATCAAACGCCTTGCAACCGGTGGCAGAACTGTTGTCACCACCATTCATCAACCCTCTAGCCGGC TTTACTACATGTTTGACAAGGTGGTTCTTCTCTCTGAAGGGTGCCCCATCTACTATGGTCCTGCTTCAACTGCCCTTGAG TACTTTTCATCTGTTGGTTTCTCCACTTGTGTCACTGTTAATCCAGCTGATCTCTTACTTGATCTTGCCAATGGTAATTA ACAGCCAGTAATCATTTGTTTCATTTAATTTTTGTCCATTCTTATAACATGTTTTGAAATCGTTCTGCAATTGATTCTAA AGTCAAAATCAATTCTGGAAAGAAGCTTCTTTGTGTAGCTTTTGCTTCTGCTTCTGAGTACCAGAATTGATTCTGAGAAA AAATAAATTGATCAAACCATGCTATATAAGTTATTAACTAAACCAATGGTCTTCAAAAGTAAAAACTAGGCACACACTTT TTCTATTTATTATGCCTAAAATGGCTCCTTTTATTTTTCAATCATATATATATTTTTGTTTACTTGAGATGGAGATTTTG TCTGGCCTACAAGCTAGAAGTAGCACTCTTAAGATTTTCCTTTTACATGAATTGTACTGAGTGAGACCCCATTCTCAAAC CTTACTGAAATTTACTATGGTTAATTTGGAGAGAACCTTATATTATTTGTATTTATTCAATTACATGTATGTATTCTCAG ACTCTTCGAGTATTATTTGAAGAAAGAAACACTAACAATGTCATGACAAAAATTGAAAATTGCAGGGATTGGCCCAGACT CCAAGCATGTTACTGAACAAAGTGAGGGCCTGGAACAGGAGAGGAAGATGGTGAGAGAATCTCTCATCACAGCTTATGAC CAGAACATAGCTACAAAGCTGAAAGCTGAGGTTTGCAGCCTGGAGGTGAACAATTACAATTTCACAAAAGATGCTATGTC AAGTAAGTCTTATATCTTTTAAGGAGAAATAAAAAGCAAATTAAGAGTTTCCCTTTTTGTTACTAGTCTTGCTTAGTATT CTGAAATGGCTTAATGGATGCAGAAAATCACATAAGACCAGAGCAATGGTGCACAAGCTGGTGGTATCAGTTCAAGGTGT TGTTACAGAGGGGAGTGAGGGAGAGAAGATATGAAGCCTTCAACAGGCTGAGAATATTCCAAGTCATAAGTGTTGCTTTC CTTGGTGGACTCTTGTGGTGGCATACACCAGAATCACACATTCAAGACAGGGTAAGTAAGAACAGTTTCAAGTTTATCTT TTCTAGTTGATAGCAACTAATAATAAGATCAACTACAAAAAGTTCTGAATAGAATTAGGCCTTTAAAAAGGCCAAACCTG ATACTGTAAACCTCCCGCTTTATGCGAGGTCGAGGTCTAGGGAGGGACCTAATCCACTTTGTGGATCTAATGTAGGCAGT CTTACATTGCATTTTTGCAAGAGGCTGATTCCACGGCTCAAACCTATAATCGCAAAGTCACATGGCAGAATTAGGCCTTT AATTTGACTAAAATTTTCTTTTCCTTTCATAAATGCAGGTGGCTTTGCTTTTTTTCTTCTCAGTTTTCTGGGGATTCTAC CCTCTCTACAATGCAGTTTTCACATTTCCTCAAGAGAGGAGAATGTTGATCAAGGAACGGTCATCAGGAATGTACCGCCT TTCTTCTTACTTCCTAGCAAGAACAATAGGAGACCTACCTCTGGAGCTTGCACTTCCAACAGCATTTGTCTTCATAATCT ATTGGATGGGAGGGCTTAAACCTGATCCTATGACTTTCATCCTTTCTCTTGTTGTGGTTCTTTACAGTGTTGTTGTCTCT CAAAGTCTCGGCCTCGCATTCGGTGCTATTTTGATGGAGGTTAAACAAGCCACAACTCTAGCTTCTGTGACAACTCTTGT GTTTCTCATTGCTGGAGGGTACTACATACAACAGATTCCTCCCTTCATAGTATGGCTCAAGTACTTGAGCTATAGCTTCT ACTGTTACAAGCTTCTTCTTGGTGTCCAATACAATGAAAATGATTACTATGAATGCTCAGAAGGGAAGTTCTGCAAGGCT GTGGATTTTCCTCCCATAAAATCAATGGGTTTGGATCATCTGTGGGTTGATGTGTTCATCATGGCCTTGATGTTGGTCGG TTATCGACTCTTAGCTTATTTTGCACTGCATAGAGTTAGGTAG
CDS sequence (LotjaGi2g1v0349600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGTTGGGGCAGTAAAGGGAGTTGCAAAGAGAAAACAATACTGAATGGAATCACAGGCATGGTGTGTCCTGGAGAAAT TCTAGCTATGTTGGGGCCATCAGGTAGTGGTAAAACCACACTTCTCACAGCTCTGGGAGGGAGACTCAATGGTAAACTAT CTGGAAAAATCACATATAATAATCAACCTTTCTCTGGTGCCATAAAAAGAAGAACAGGTTTTGTGGCTCAGGATGATGTG CTTTACCCTCACCTCACAGTCACTGAAACTCTAGTGTTCACTGCACTTCTGAGGCTGCCAAAAACATTGACCAGAGATGA AAAAGTTCAGCATGTGGAGAGAGTTATCACTGAGCTAGGACTGAGTGGTTGCAGAAGCAGCATGATTGGAGGACCTCTTT TGAGAGGGATATCAGGTGGTGAGAAAAGGAGGGTGAGCATAGGACAAGAAATGCTCATCAATCCAAGCCTGTTGTTGCTG GATGAGCCAACTTCAGGTTTGGATTCCACCACTGCTTTGAGGATTCTCAACACCATCAAACGCCTTGCAACCGGTGGCAG AACTGTTGTCACCACCATTCATCAACCCTCTAGCCGGCTTTACTACATGTTTGACAAGGTGGTTCTTCTCTCTGAAGGGT GCCCCATCTACTATGGTCCTGCTTCAACTGCCCTTGAGTACTTTTCATCTGTTGGTTTCTCCACTTGTGTCACTGTTAAT CCAGCTGATCTCTTACTTGATCTTGCCAATGGGATTGGCCCAGACTCCAAGCATGTTACTGAACAAAGTGAGGGCCTGGA ACAGGAGAGGAAGATGGTGAGAGAATCTCTCATCACAGCTTATGACCAGAACATAGCTACAAAGCTGAAAGCTGAGGTTT GCAGCCTGGAGGTGAACAATTACAATTTCACAAAAGATGCTATGTCAAAAAATCACATAAGACCAGAGCAATGGTGCACA AGCTGGTGGTATCAGTTCAAGGTGTTGTTACAGAGGGGAGTGAGGGAGAGAAGATATGAAGCCTTCAACAGGCTGAGAAT ATTCCAAGTCATAAGTGTTGCTTTCCTTGGTGGACTCTTGTGGTGGCATACACCAGAATCACACATTCAAGACAGGGTGG CTTTGCTTTTTTTCTTCTCAGTTTTCTGGGGATTCTACCCTCTCTACAATGCAGTTTTCACATTTCCTCAAGAGAGGAGA ATGTTGATCAAGGAACGGTCATCAGGAATGTACCGCCTTTCTTCTTACTTCCTAGCAAGAACAATAGGAGACCTACCTCT GGAGCTTGCACTTCCAACAGCATTTGTCTTCATAATCTATTGGATGGGAGGGCTTAAACCTGATCCTATGACTTTCATCC TTTCTCTTGTTGTGGTTCTTTACAGTGTTGTTGTCTCTCAAAGTCTCGGCCTCGCATTCGGTGCTATTTTGATGGAGGTT AAACAAGCCACAACTCTAGCTTCTGTGACAACTCTTGTGTTTCTCATTGCTGGAGGGTACTACATACAACAGATTCCTCC CTTCATAGTATGGCTCAAGTACTTGAGCTATAGCTTCTACTGTTACAAGCTTCTTCTTGGTGTCCAATACAATGAAAATG ATTACTATGAATGCTCAGAAGGGAAGTTCTGCAAGGCTGTGGATTTTCCTCCCATAAAATCAATGGGTTTGGATCATCTG TGGGTTGATGTGTTCATCATGGCCTTGATGTTGGTCGGTTATCGACTCTTAGCTTATTTTGCACTGCATAGAGTTAGGTA G
Protein sequence (LotjaGi2g1v0349600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCWGSKGSCKEKTILNGITGMVCPGEILAMLGPSGSGKTTLLTALGGRLNGKLSGKITYNNQPFSGAIKRRTGFVAQDDV LYPHLTVTETLVFTALLRLPKTLTRDEKVQHVERVITELGLSGCRSSMIGGPLLRGISGGEKRRVSIGQEMLINPSLLLL DEPTSGLDSTTALRILNTIKRLATGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYYGPASTALEYFSSVGFSTCVTVN PADLLLDLANGIGPDSKHVTEQSEGLEQERKMVRESLITAYDQNIATKLKAEVCSLEVNNYNFTKDAMSKNHIRPEQWCT SWWYQFKVLLQRGVRERRYEAFNRLRIFQVISVAFLGGLLWWHTPESHIQDRVALLFFFSVFWGFYPLYNAVFTFPQERR MLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPDPMTFILSLVVVLYSVVVSQSLGLAFGAILMEV KQATTLASVTTLVFLIAGGYYIQQIPPFIVWLKYLSYSFYCYKLLLGVQYNENDYYECSEGKFCKAVDFPPIKSMGLDHL WVDVFIMALMLVGYRLLAYFALHRVR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 344 | 344 | - | – | |
| ProSiteProfiles | 5 | 237 | 233 | 17.594 | ||
| Gene3D | 5 | 231 | 227 | 6.3E-55 | – | |
| CDD | 5 | 219 | 215 | 2.22273E-75 | – | |
| PANTHER | 9 | 585 | 577 | 0.0 | – | |
| PANTHER | 9 | 585 | 577 | 0.0 | – | |
| SUPERFAMILY | 10 | 229 | 220 | 6.32E-47 | ||
| Pfam | 15 | 165 | 151 | 1.1E-24 | ||
| SMART | 24 | 214 | 191 | 1.2E-10 | ||
| ProSitePatterns | 137 | 151 | 15 | - | ||
| Pfam | 324 | 530 | 207 | 1.2E-36 | ||
| TMHMM | 342 | 364 | 23 | - | – | |
| Phobius | 345 | 362 | 18 | - | – | |
| Phobius | 363 | 373 | 11 | - | – | |
| Phobius | 374 | 396 | 23 | - | – | |
| TMHMM | 374 | 396 | 23 | - | – | |
| Phobius | 397 | 416 | 20 | - | – | |
| Phobius | 417 | 440 | 24 | - | – | |
| TMHMM | 417 | 439 | 23 | - | – | |
| Phobius | 441 | 451 | 11 | - | – | |
| Phobius | 452 | 476 | 25 | - | – | |
| TMHMM | 454 | 476 | 23 | - | – | |
| Phobius | 477 | 482 | 6 | - | – | |
| Phobius | 483 | 502 | 20 | - | – | |
| TMHMM | 483 | 505 | 23 | - | – | |
| Phobius | 503 | 559 | 57 | - | – | |
| Phobius | 560 | 582 | 23 | - | – | |
| TMHMM | 560 | 582 | 23 | - | – | |
| Phobius | 583 | 586 | 4 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi2g1v0349600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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