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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0353000 |
| Transcript ID | LotjaGi2g1v0353000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat (LRR) family protein; TAIR: AT4G35470.1 plant intracellular ras group-related LRR 4; Swiss-Prot: sp|Q9SVW8|PIRL4_ARATH Plant intracellular Ras-group-related LRR protein 4; TrEMBL-Plants: tr|V7CM87|V7CM87_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0353000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:82931558..82935055) extracted from Lotus japonicus Gifu genome v1.2.
CATTTTTTCATTTCCACAAACAACCGTTAATAAAACCGCGGGCGGATTAGAAAAGAAAAACAAGAGGTGGTTATTTAAGA AAAGTATCAAGGGCATATCGGGAAATATAAAAAGTGGCGCATACGACAAAAATAGCACGAAGTAGAAGAAGAAGAACAAC AACAAGAACCAGAAGAAGAAGAAGAAGAAGAGATTCAAATGGTGCAGATCTTGTTCATCCAATCCATTCAAAACCACTCT CTCACCTTCACCATTCTCCCTTCTTCATTGCTCGCTCTAAACTGAACAAAACCGTTCGGTTTTCGTTTTCTTCTTCCCAA TTTCAGATTCACCGTTTCTTCTCTGAATTCCGCTATAACCAGGTCTGAACGTTGCAACTTTCTGTGTTCGTTGGGTTCTT CAACCGGAATCACAAACAGAATGAGCCTCACGGTGTTTCTTCCTTGTCGGGTACTGTGAAACTCGTTTCTTTCTTGATTC AACCGATTTGGGGGTGTGTGTGTAACTGTCTGAAACTGTAAGCAAAACCGTTTTTCCTTCTTTTTCCCCAACTGGGTATT CGTGATGGTGTTCAAGTTTTGAAATTTCGGTGGTGAATTTGGAACGAAAAATAATGGAGTCTTGGTCGTCGGTGGATGGG GTGGTGGAGGAGATAATGAGGATTCATAGATCTTTGCCGGCGAGGCCTGCGATTGATGAGGTTGAAGCGGCGAATGGTTT GATTGTGAATGTTGAGAAGGAGGATCAGGTGAGGCTTGAATCCATTGCGAGACAGAGCAAGGGTCCTGATGTGCCTGATG AGCTTTTCATGATCTTGCAAGAGATGCAGAAGAACATGTTGTATTTCCAGAGTAAGGAGCAGAGGAGGGAGGCTATGAAA CTTCTTGATCTTGAGAATGTCCATTCACTGTTTGATGAATTGATTCAGAGAGCTTCCATGTGTGTTGCCAATCCCTCCAC AAGTACTTCTAGCAAAAAAAGTTACTACAATGGCTCTGCTTCCACGGTTTCGCCTAGCTTGTCGAAGAATTCGGCTTCTG CTTCTACTTCTGCTTCTAGGGGTGGTTTTGATAGGCCTCCACCTCCTGCATCTGTTGCTTCTTCCAGCTTGATGCAAGCG GAGAGGAAACCTTCCAAGAGTTCAGAGTTGGTTACTAGAGATGATAGTTATGTGAGTAAGTCCAAGTCCACATTCTACTC CAACGGGTATGGAATTGAACCCAGCATCCCCACCAAAGCTCAGATATTGGATTCATCATTCAAACCCACAACTACCTCAG GTAACTAACTATTGTCTATTCATGTATGTCTTTCAGCATTCAATTCAGTTGATATTGTTATTTGTTTAGGTAGGTAATTG TGTTTTGATGGAATGTTGTTTTGCAGGTAAAGATGGTGATAAGTTAAGTTTGATTAAACTTGCTAGCTTAATTGAAGTTT CTGCGAAGAAAGGCACTCGTGATCTGAAACTACAGAACAAGCTATTGGATCAAGTTGATTGGCTACCTGATTCATTAGGA AAGTTATCAAGCTTGGTCACCCTTGATTTATCAGAGAATCGGATTGTGGCCTTACCTTCCACAATTGGAGGCCTTTCATC ATTGACCAGATTGGATTTGCATACCAATAGGATCCAGGAGCTCCCTGATTCTATTGGAAATCTTCTCAATCTAGTCTATC TAGATCTGCGGGGAAACCAGTTACCATCTCTGCCTGCATCTTTTGGCAGATTGATACGTCTTGAGGAGGTTGATTTGAGT GCAAATCAGCTTGCTGTGCTTCCTGACACTATAGGCTCACTTGTTAGCCTACAAATATTGAATGTGGAAACAAATGATAT AGAAGAGATTCCACATTCTATTGGTAATTGTTCTTCCCTTAGAGAGCTTCATGCTGACTATAACCGACTTAAGGCCTTAC CAGAAGCTGTAGGGAAGATTCAGAGCCTGGAGGTTTTGTCCGTGCGGTACAATAACATCAAACAACTACCCACAACAATG TCATCTCTAACAAGCCTGAAGGAACTTGATGTAAGTTTCAATGAGCTCGAGTCAGTGCCTGAGAGCTTGTGTTTTGCTAC CTCCCTTGTCAGGATGAACATAGGGAACAATTTTGCTGACATGCGAAACTTACCACGATCCATTGGGAACCTAGAAATGC TTGAGGAATTGGATATCAGCAATAACCAGATACGTGTCCTTCCTGAATCATTTAAGTTGCTCACAAATCTTCGTGTCCTG CGAGTGGAAGAGAATCCTCTTGAAGTTCCACCAAGAGATATAGCTGAGAAGGGAGCACAGGTAACCATCCCATTAATGTA GTTCTTTTGAATTTTATATTTTGATAAAGATCTTTCTATTTTTGAATCTCAATTTTCATATGTTGGTTTGGTGCATCTTA GGCTGTTGTTCAGTACATGGTTGAGCTTGGGGAGAAGAAGGATGTTAAACCACAAAAGCCACTAAAGCAGAAAAAGAGTT GGGCTCAGATATGCTTCTTTTCAAAGTCTAACAAAAGAAAGCGCGGCGTTGACTATGTGAAAACCTGATTTTATTTAACT ACACACCAATGTTGACAAGCAACATATTCCATGAGTAAGTTTTTTTTTTTTCCAGGTCAATACATCACCTACAAAATTAG CTTTGGGTACTAATTATGAAATAGTTCTAGGCTTAACCTTAGTGCATGACTTTGTGATTAACATTAACCTAGTTTCACCG TCACTACTTGTGGCATGCCTGAATGATAGCAATGAGGGAATGCAGGGCTGCTACTAATGTTGTCTATCTTCCTATTTTGC AGGGATATCCATTTAAATAGAGACGATGTATCTCTCATTCTGGGGTCAATAACATGCGTGCCAGAATGAATTAGCAGCCT TTGTTGGATGTTATAATTTGCTTTGACTTGGCGGCACAAATTGTAGATTTCTTGTTCTATATATTCTGATTTTTTCCCTG TACAATTTCAATTTTCGATTTAATTTCCTTTGTATTTCAGTTGTCTTGAGGGTAGAAAGAAGTGTACACAATCCAACAGG CCAAATAGTTATGGAGGGTGGGGGAGAAACCCAAGATGATTATGTACCTTGTTTATGTATAATTTATGTACAACTGCACC TTCAATCCATTGTTAATTATTGAATGAATTACACTTACTGTCTGTACTTTGTACCACTTGCAGAAATGTTATCTTCTTTC AGTGAAATGTGCCATCTGAATAGCTAATAAGCCTTGTTACTGTTACTGAATGCAATCTAAAATATGAATGAAACTTACAT TGCTGTAATGTTCATGTTAAGAAATTGAATACTTCAAGGACTAGTTTCTCTGCAACTTATATTAATCATTATCACCATCT TGATTCATTTTACTGTGTGTTCAGCTTTAGAATGTTTTTGCATGTTTTATAATCTTGTTTTTTGTTTTGATTTGAAGCCT CCATGATTTGTATGTTAGTGGATAATATTAACCTTTCAAACTTCAAAAAGGATACTTA
CDS sequence (LotjaGi2g1v0353000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTCTTGGTCGTCGGTGGATGGGGTGGTGGAGGAGATAATGAGGATTCATAGATCTTTGCCGGCGAGGCCTGCGAT TGATGAGGTTGAAGCGGCGAATGGTTTGATTGTGAATGTTGAGAAGGAGGATCAGGTGAGGCTTGAATCCATTGCGAGAC AGAGCAAGGGTCCTGATGTGCCTGATGAGCTTTTCATGATCTTGCAAGAGATGCAGAAGAACATGTTGTATTTCCAGAGT AAGGAGCAGAGGAGGGAGGCTATGAAACTTCTTGATCTTGAGAATGTCCATTCACTGTTTGATGAATTGATTCAGAGAGC TTCCATGTGTGTTGCCAATCCCTCCACAAGTACTTCTAGCAAAAAAAGTTACTACAATGGCTCTGCTTCCACGGTTTCGC CTAGCTTGTCGAAGAATTCGGCTTCTGCTTCTACTTCTGCTTCTAGGGGTGGTTTTGATAGGCCTCCACCTCCTGCATCT GTTGCTTCTTCCAGCTTGATGCAAGCGGAGAGGAAACCTTCCAAGAGTTCAGAGTTGGTTACTAGAGATGATAGTTATGT GAGTAAGTCCAAGTCCACATTCTACTCCAACGGGTATGGAATTGAACCCAGCATCCCCACCAAAGCTCAGATATTGGATT CATCATTCAAACCCACAACTACCTCAGGTAAAGATGGTGATAAGTTAAGTTTGATTAAACTTGCTAGCTTAATTGAAGTT TCTGCGAAGAAAGGCACTCGTGATCTGAAACTACAGAACAAGCTATTGGATCAAGTTGATTGGCTACCTGATTCATTAGG AAAGTTATCAAGCTTGGTCACCCTTGATTTATCAGAGAATCGGATTGTGGCCTTACCTTCCACAATTGGAGGCCTTTCAT CATTGACCAGATTGGATTTGCATACCAATAGGATCCAGGAGCTCCCTGATTCTATTGGAAATCTTCTCAATCTAGTCTAT CTAGATCTGCGGGGAAACCAGTTACCATCTCTGCCTGCATCTTTTGGCAGATTGATACGTCTTGAGGAGGTTGATTTGAG TGCAAATCAGCTTGCTGTGCTTCCTGACACTATAGGCTCACTTGTTAGCCTACAAATATTGAATGTGGAAACAAATGATA TAGAAGAGATTCCACATTCTATTGGTAATTGTTCTTCCCTTAGAGAGCTTCATGCTGACTATAACCGACTTAAGGCCTTA CCAGAAGCTGTAGGGAAGATTCAGAGCCTGGAGGTTTTGTCCGTGCGGTACAATAACATCAAACAACTACCCACAACAAT GTCATCTCTAACAAGCCTGAAGGAACTTGATGTAAGTTTCAATGAGCTCGAGTCAGTGCCTGAGAGCTTGTGTTTTGCTA CCTCCCTTGTCAGGATGAACATAGGGAACAATTTTGCTGACATGCGAAACTTACCACGATCCATTGGGAACCTAGAAATG CTTGAGGAATTGGATATCAGCAATAACCAGATACGTGTCCTTCCTGAATCATTTAAGTTGCTCACAAATCTTCGTGTCCT GCGAGTGGAAGAGAATCCTCTTGAAGTTCCACCAAGAGATATAGCTGAGAAGGGAGCACAGGCTGTTGTTCAGTACATGG TTGAGCTTGGGGAGAAGAAGGATGTTAAACCACAAAAGCCACTAAAGCAGAAAAAGAGTTGGGCTCAGATATGCTTCTTT TCAAAGTCTAACAAAAGAAAGCGCGGCGTTGACTATGTGAAAACCTGA
Protein sequence (LotjaGi2g1v0353000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESWSSVDGVVEEIMRIHRSLPARPAIDEVEAANGLIVNVEKEDQVRLESIARQSKGPDVPDELFMILQEMQKNMLYFQS KEQRREAMKLLDLENVHSLFDELIQRASMCVANPSTSTSSKKSYYNGSASTVSPSLSKNSASASTSASRGGFDRPPPPAS VASSSLMQAERKPSKSSELVTRDDSYVSKSKSTFYSNGYGIEPSIPTKAQILDSSFKPTTTSGKDGDKLSLIKLASLIEV SAKKGTRDLKLQNKLLDQVDWLPDSLGKLSSLVTLDLSENRIVALPSTIGGLSSLTRLDLHTNRIQELPDSIGNLLNLVY LDLRGNQLPSLPASFGRLIRLEEVDLSANQLAVLPDTIGSLVSLQILNVETNDIEEIPHSIGNCSSLRELHADYNRLKAL PEAVGKIQSLEVLSVRYNNIKQLPTTMSSLTSLKELDVSFNELESVPESLCFATSLVRMNIGNNFADMRNLPRSIGNLEM LEELDISNNQIRVLPESFKLLTNLRVLRVEENPLEVPPRDIAEKGAQAVVQYMVELGEKKDVKPQKPLKQKKSWAQICFF SKSNKRKRGVDYVKT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 568 | 563 | 2.6E-235 | – | |
| PANTHER | 6 | 568 | 563 | 2.6E-235 | – | |
| MobiDBLite | 115 | 183 | 69 | - | – | |
| MobiDBLite | 115 | 149 | 35 | - | – | |
| Gene3D | 225 | 423 | 199 | 2.0E-47 | ||
| SUPERFAMILY | 249 | 517 | 269 | 4.31E-62 | – | |
| SMART | 269 | 288 | 20 | 63.0 | – | |
| SMART | 269 | 291 | 23 | 0.75 | ||
| SMART | 269 | 294 | 26 | 46.0 | – | |
| ProSiteProfiles | 271 | 292 | 22 | 6.58 | ||
| Pfam | 271 | 328 | 58 | 1.1E-9 | ||
| SMART | 292 | 311 | 20 | 32.0 | – | |
| SMART | 292 | 314 | 23 | 0.3 | ||
| ProSiteProfiles | 294 | 315 | 22 | 7.573 | ||
| SMART | 315 | 334 | 20 | 150.0 | – | |
| SMART | 315 | 337 | 23 | 3.5 | ||
| SMART | 315 | 346 | 32 | 150.0 | – | |
| ProSiteProfiles | 317 | 338 | 22 | 7.15 | ||
| SMART | 338 | 357 | 20 | 240.0 | – | |
| SMART | 338 | 360 | 23 | 9.3 | ||
| ProSiteProfiles | 340 | 361 | 22 | 6.079 | ||
| SMART | 361 | 384 | 24 | 1.1 | ||
| SMART | 361 | 380 | 20 | 100.0 | – | |
| ProSiteProfiles | 363 | 384 | 22 | 6.411 | ||
| SMART | 384 | 403 | 20 | 0.56 | – | |
| Pfam | 385 | 443 | 59 | 1.6E-8 | ||
| SMART | 385 | 406 | 22 | 240.0 | ||
| ProSiteProfiles | 386 | 407 | 22 | 5.363 | ||
| SMART | 407 | 426 | 20 | 18.0 | – | |
| SMART | 407 | 429 | 23 | 80.0 | ||
| ProSiteProfiles | 409 | 430 | 22 | 6.541 | ||
| Gene3D | 424 | 535 | 112 | 1.0E-26 | ||
| SMART | 430 | 453 | 24 | 0.034 | ||
| SMART | 430 | 449 | 20 | 0.54 | – | |
| SMART | 430 | 448 | 19 | 76.0 | – | |
| ProSiteProfiles | 432 | 453 | 22 | 6.911 | ||
| SMART | 478 | 497 | 20 | 1.8 | – | |
| SMART | 478 | 506 | 29 | 140.0 | – | |
| SMART | 478 | 500 | 23 | 0.11 | ||
| ProSiteProfiles | 480 | 501 | 22 | 8.174 | ||
| Pfam | 481 | 499 | 19 | 0.74 | ||
| SMART | 501 | 524 | 24 | 43.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0353000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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