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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0377500 |
| Transcript ID | LotjaGi2g1v0377500.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DNA-directed RNA polymerase subunit; TAIR: AT4G35800.1 RNA polymerase II large subunit; Swiss-Prot: sp|P18616|NRPB1_ARATH DNA-directed RNA polymerase II subunit 1; TrEMBL-Plants: tr|V7CLS7|V7CLS7_PHAVU DNA-directed RNA polymerase subunit; Found in the gene: LotjaGi2g1v0377500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:87474350..87483546) extracted from Lotus japonicus Gifu genome v1.2.
GACGAACGGGCCTTGGGCTTATATATGGATCACGTTAAATTAAAGTGTGCGAAGAGTGCACGTTAGCATTAACTGCGCAA GATACCACACCTCTCCGTCTATAAATAAGACCTTAGGGCTCGTTTTTGCATTTTCACTTCGCGAGAGGAGAAATCCTCTG ACCTCGAAAGCAGGTTCTCGCACCCAATCTCTCCATATAGCAAACGAACACTAAAATTGAACCTTCAATATCGAACTAGC ATCACTACTTCAGTCTCTATCCAAGTCAATTTGAATTTCCAGTTTCAACATCTCATTCAATCTCAAACCCTAGAAATCTA CAACCGCCATGGATATCCGCTTCCCTTTCTCTCCGGCGGAGGTTGCCAAAGTCCGCCTCGTCCAGTTCGGAATCCTCAGC CCGGACGAGATCGTAATTTCAACTCATCACTATCTTGAATTTGAAATCAGACGCGTGCGTTCAATTGTTTTGTTGATTGG TTTTTGTTGATTGTTTTGTTGCAGAGGCAAATGTCTGTGGTGCAAATCGAGCACGGTGAGACGACGGAGAGAGGAAAACC GAAGGTTGGAGGGTTGAGCGACCCTCGCCTTGGGACTATTGACAGGAAGATGAAGTGTGAGACGTGTACTGCTAGTATGG CTGAGTGTCCTGGTCACTTTGGCCACTTGGAGCTTGCGAAACCTATGTTTCACATCGGGTTCTTGAAGACTGTGTTGACT ATCATGCGTTGTGTTTGCTTTAACTGCTCTAAAATTCTAGCAGATGAGGTACTTTGGCACTCATTGCCCCTTTGAGAATT CAGAATGTGCTTTTCTTGATACCAACTTGATTAGCTGTTTGTCCCGTCGCGAGGAAACACGCAAATTTGAGTTCTGTTGG CAATGATTATCAATTTGAACCAAGTTAAATTGCAATAATGAACTTGGTTGATTACCAACTTGATTTTTATCTGAATTCTT ATGGTATGTTTTGGTACATAACCTAACTAAATGCATTTATTCAGTTATTGCTCGTCACGTGAGAGCTTAGAGATATTTTG TCATGAGCTAAATCTTGTCATAAGCTCAAAAGAACATATAGTTAGATACCAAGATTATAAGCTAATTTCGTAAGCTTTGG AGTACTCGAGTCCTTAAGTAGTAAGATAAGCTCAAATAAGATCTAGATAAGCTATTCAACTGCTTTAATCTATTATTCGG TATTCTGTATTGTAAGGGTGGGGAAGTGAATTATGATGTGTGTATTTAAATTGATCGTGGCTTTTGCAGCAAGATCATAA GTTTAAGCAAGCTTTGAGGATCAGGAATCCCAAACTTAGGCTGAGAAAAATTTTAGATGCTTGCAAAAACAAATCCAAGT GTGATGGTGGTGATGAAATTGACCTTCCTGGTCAAGATACAGAAGAGCCTCTTAAAAAGAGCCGCGGTGGCTGTGGTGCT CAGCAACCAAAGATTACTATTGAGGGGATGAAAATGATTGCTGAGTATAAAGCTCAAAGGAAGAAAAGTGATGATCAGGA ACAGCTTCCTGAACCTGTAGAGAGGAAACAGACTCTGTCTGCAGAAAGGGTAATTGATCTAAATGCTGAATTTATGACGT AAACACTTCAATGTTACAGAAACTAATGTTGTTGCTGGCTTGTTAAATCTGTTGTAGGTTCTCAGTGTTCTGAAAAGGAT AAGCGATGAGGACTGCCAGTTGCTAGGCTTGAATCCAAACTATGCCCGTCCTGACTGGATGATTTTACAAGTTCTTCCAA TTCCTCCTCCACCTGTGAGACCTTCTGTAATGATGGACACATCCTCCAGGAGTGAGGCAAGTGTTTTCTTTTGCCGTTAT TTATTACGAGTGTTAGATTTTTACAAATTTTGCAAGTTTTTGTATTTTATTACCATTTGCTGCTGATAAGGGTTACTAAT ATCATTTGCAATGACAATTTTTTACACTTTAATTTCATTACTAATTTTTTTGGCCTCTGTTGCATGCAGGATGATTTAAC TCATCAGCTAGCCATGATCATCAGGCACAATGAGAATCTGAAGAGACAGGAGAGGAATGGATCTCCTGCACATATTATTT CAGAGTTTGCTCAGTTGTTGCAATTTCACATAGCCACATATTTTGATAATGAGTTGCCTGGATTGCCAAGGGTATAACTG TTTTTAGAGACCGGCAATTAGCACTGATATTTTCTATGCTTTCTTTAACCTTTGTTGTTTTTGAATTTTTCGTAACACAT AGAACATAGAGTAATTTTTATTTATTTTTTCATAGGCTACTCAAAGATCTGGAAGGCCAATCAAATCAATCTGTAGCAGG CTTAAAGCAAAAGAAGGTCGGATTAGAGGTAACTTGATGGGGAAAAGAGTTGATTTTTCTGCTCGAACGGTAATTACACC AGACCCAACCATTAACATCGATCAACTGGGAGTACCATGGAGTATTGCTTTGAATCTTACATACCCTGAGACTGTGACTC CATACAATATTGAGAGGTTGTCACTTGGATATGATTTTCTGGTTGCTTATCTATTAGTGTGCTCTATATAATATTTTTAA CGAAAATATTTGAAATGAAAAAAAAAACCATCACACAGGTTGAAGGAACTGGTTGAGTATGGACCTCATCCTCCGCCTGG AAAAACTGGTGCCAAGTATATCATTCGTGATGATGGGCAAAGGCTTGATCTCCGATATATAAAGAAAAGTAGCGATCACC ATTTGGAGCTTGGATACAAGGTATTGTTTTTAAATAATGATAATTTTTTTATGTTACCTAATAATGGCTTCTAATAGTTC TTAATATTGTTGTTTTAGGTGGAGCGACATTTGAACGATGGAGACTTTGTTCTCTTCAATCGTCAGCCTAGTCTTCATAA AATGTCTATCATGGGTCATAGAATCAAAATTATGCCTTACTCTACATTCCGGCTTAACTTGTCAGTAACTTCTCCATATA ATGCTGATTTTGATGGTGATGAAATGAACATGCATGTTCCTCAGTCATTTGAAACTAGAGCTGAGGTGTTGGAGCTGATG ATGGTACCAAAATGCATAGTGTCCCCACAAGCAAATAGGCCCGTAATGGGAATTGTCCAAGATACACTCCTAGGATGCAG AAAAATCACCAAGAGAGATACCTTCATTTCAAAGGTTATATTAAGTGAACTTTTCTTTTGTTGCACTGCAGTTTGGCTTC ATGGTTGTTGCATAATTTGCTTAGCAGTCTAATGGGTGTTTTTAATTTGCAGGATGTTTTTATGAACATATTGATGTGGT GGGAAGATTTTGACGGGAAAGTTCCTACTCCCACAATATTGAAGCCAGAACCATTGTGGACTGGGAAACAAGTTTTCAAT CTTATAATTCCTAAACCAATAAATCTGATCAGATATTCTAGCTGGCACAATGAGAGTGAAAGAGGACCCATAACCCCTGG GGATACGATGGTTAGAATTGAAAAGGGGGAACTACTTACTGGAACTCTATGCAAAAAGACTCTTGGAACATCCACCGGAA GTCTGATTCATGTCATTTGGTATGCAGCTTCAGTATATAATTATACAAATACCTGAAAACTTGAAATTTCCACCTGAATT AGATTATTATCGTTGTTCACCTTACAATGTTTTCTAAAAAAGAGGGGAAATTGTTTTTTTGTTGATCTTAATTGTTACTT CAAATTGACTTTGATAAGTAATTTTCTATTCTTTTCAAGTGCTTTCTGATAGTAAAGTGTAAACTTTGAGTGGCTCTAGA AGTTGTTACAGTTACTTCCTTTCTTCATTATTCATCGCACTGAATCTCTACTTGAATACAGGGAAGAGGTTGGCCCTGAT GCAGCACGTAAATTCCTTGGGCATACTCAGTGGCTTGTAAACTACTGGCTTTTGCAGCATGCTTTTAGCATTGGAATAGG GGATACAATTGCTGACGCTTCAACTATGGAGACTATTAATCAGACTATTTCACAAGCTAAGGAGAAAGTGAAACAACTCA TCAGGGAAGCTCAAGAGAAGAAATTAGAGGCTGAACCTGGTCGGACAATGATGGAGTCTTTTGAAAATAGAGTGAACCAG GTTCTTACTTTACATTTCTTGTCACATTGTTAGATCCAACGAATTTTGCTTTGGCATGTATCTGACGTATTATGATGCTT GATACTTTCAGACTCTGAATAAAGCTCGTGATGATGCGGGAAATAGTGCCCAAAAAAGTTTATCTGAGAGCAATAATCTG AAAGCTATGGTGACAGCTGGTTCTAAAGGAAGTTTTATCAACATATCTCAGATGACTGCTTGTGTGGGCCAGCAGAATGT TGAGGGTAAGCGAATTCCATATGGGTTTGTAGACCGGACATTGCCTCACTTTACAAAAGATGATTATGGGCCTGAAAGTC GTGGCTTTGTGGAGAACTCATATCTTCGTGGGCTGACCCCTCAAGAGTTCTTTTTTCATGCCATGGGTGGTAGGGAAGGT CTTATTGATACTGCAGTGAAGACATCTGAAACTGGGTACATTCAGAGGCGGCTTGTGAAGGCTATGGAGGATATCATGGT TAAGTATGATGGCACAGTTAGGAACTCATTGGGGGATGTTATACAATTTCTCTATGGTGAAGACGGTATGGATGCTGTGT GGATAGAAACGCAGAAGCTGGATTCACTTAAAATGAAAAAAACAGATTTTGATAGGGCTTTTAGGTATGAATTTGATGAT GAATACTGGAAGCCTACTTACATGCTTGAAGAGCCTGTAGAAGACTTGAAAACGATTAGAGAATTTCGTAATGTGTTTGA GGCTGAAGTCCAAAAGCTTGAAGCTGATAGGCATCAACTTGCAACTGAAATTGCACCTACTGGTGATAGTTCTCTGCCCT TACCTGTTAACCTTAAGAGGCTTATCTGGAATGCTCAGAAGACCTTTAAGGTTGACTTCCGAAGGCCTTCTGATATGCAT CCAATGGAAATTGTAGAAGCTATTGATAAGCTCCAAGAGCGACTTAAAGTGGTTCCTGGTGAGGATCTTTTAAGCCAAGA AGCTCAGAAGAATGCTACTCTCCTATTTAACATTCTGGTTCGCAGCACTTTTGCCAGTAAAAGGGTCCTGGAAGAATACA GGCTTTCTCGTGAGGCATTTGAGTGGGTTGTCGGAGAAATAGAATCAAGGTTCCTGCAATCACTTGTAGCCTCTGGTGAA ATGATTGGTTGTGTGGCAGCACAATCAATTGGTGAGCCTGCTACCCAGATGACTCTCAACACTTTCCACTATGCTGGTGT CAGTGCTAAGAATGTCACCTTGGGTGTTCCCAGGTTAAGGGAAATCATTAATGTGGCTAAGAGAATTAAAACACCTTCTC TGTCTGTTTACTTGAAACCTGACGTCAGTAAAACTAAAGAGAGAGCCAAGACTGTCCAGTGTGCTTTAGAATATACCACT CTCAGGAGTGTGACTCAAGCTACAGAGGTTTGGTATGATCCCGACCCAATGAGCACAGTTATTGATGAGGATGTTGATTT CGTGAAGTCCTACTATGAAATGCCTGATGAAGAAGTTGCGCTTGAAAAAATCTCACCCTGGTTGCTTCGCATAGAATTGA ATCGTGAAATGATGGTGGATAAGAAGTTGAGTATGGCAGACATTGCTGAGAAGATTAACCTTGAATTTGATGATGATTTG ACATGTATTTTTAATGATGACAATGCTGAGAAACTTATACTTCGTATCCGTATTATGAACGCCGAAGGGCCCAAGGGAGA GATTCAGGATGATACTGCTGAAGATGATGTTTTCTTAAAGAAAATAGAAACCAACATGCTGACTGAAATGACCTTGCGAG GTATCGCAGACATCAACAAAGTGTTTATCAAAAATACTAAAATTCAGAAGTTTGATGAGGTTGAAGGGTTTAAGCCTCAT GAAGAATGGATGCTTGATACTGAAGGTGTCAACCTTCTAGCTGTAATGTGCCATGAAGATGTTGATGCATCGAGGACTAC AAGCAACCACTTGATTGAAGTTATTGAAGTTCTTGGTATTGAGGCAGTTCGGCGGTCTCTGCTGGATGAATTGCGTGTTG TCATTTCTTTTGATGGTTCTTATGTCAATTATAGGCACCTGGCTATCCTTTGTGATACCATGACTTATCGGGGACATTTG ATGGCAATTACGCGTCACGGTATCAACCGAAATGATACAGGCCCTATGATGAGATGCTCATTTGAAGAGACTGTTGATAT TCTGCTTGATGCAGCTGTATATGCTGAGTCTGATCACTTGAGGGGCGTCACTGAAAATATTATGTTAGGTCAACTTGCCC CCATCGGCACTGGTGAGTGCGCCTTGTATCTTAATGATGAGATGCTGAAAAATGCTATTGAGCTCCAGCTACCTAGCTAT ATGGATGGTCTTGATTTTGGCATGACACCTGGCCGTTCCCCAATATCTGGAACTCCGTATCATGAAGGCATGATGTCTCC AAGTTATATGTTAAGCCCAAATCTACGCTTGTCTCCTACCAATGATGCACAGTTTTCACCTTATGTTGGTGGGATGGCAT TTTCTCCTACTTCATCTCCTGGTTACAGTCCTTCATCTCCAGGTTACAGTCCATCATCACCAGGATACAGTCCCACATCT CCAGGGTACAGCCCCACTTCCCCTGGGTACAGCCCCACATCACCTGGGTACAGCCCCACCTCTCCAACATACAGTCCTAG CTCTCCAGGATATAGTCCTACAAGCCCAGCTTATTCACCAACCAGTCCATCTTACTCCCCCACATCACCGAGTTATAGCC CTACATCACCCAGCTACAGTCCCACCTCTCCAAGCTACAGCCCCACATCTCCCAGCTATAGCCCCACTTCACCGGCGTAC AGTCCCACTTCACCAGCATATAGCCCCACTTCACCGGCTTATAGTCCTACTTCCCCATCATACAGTCCTACTTCACCATC ATACAGTCCTACTTCGCCTTCCTACAGCCCAACATCACCCTCATATAGCCCAACATCTCCATCATATAGTCCTACATCAC CTGCTTATAGTCCCACATCTCCTGGGTACAGCCCTACATCTCCCTCTTACAGCCCAACATCTCCATCATATAGCCCTACT TCCCCAAGTTACAATCCACAGTCTGCTAAGTATAGTCCTTCATTGGCATATTCTCCAAGTAGCCCAAGGTTGTCTCCATC AAGTCCATATAGTCCAACATCTCCAAACTATAGGTAAGCATTTCTCAGGGCTTTTTAATATTTATTTTCGATACTGAATG TGATAATATATGAGCCTGTAAATGCTGTGTTGATATGTCAAAAACTTAAAACCCACTCCCTTTTCATTAGGCTTCTTGGG TTTGAGGAGGAACCAACCAGTACCTTCTGCAATAGGAGTTATTTTCATTTGGATGCTAGATATTGTTCAATGATTAGCTT GTTTGATTGCTGAATTTAGTCTATGATCTATCTTCTAGTCTTTTCTTTCTCAATTGCATTTTTCTTTCATGATAATTCTT GGCTCCAATTAAATTTGTCTTATTATTTTCCAGCCCGACATCTCCATCGTATTCCCCAACATCTCCATCTTATTCTCCAT CAAGCCCAACTTACAGTCCCAGCAGGTAAGTGAACTCTATCAATTATGCTGCCAACCTTTACACAATTCATCTCTTGTCC ATGTAAAGAACAATAGTAAAAATGTGAATTTTTATTCCTTTTATTAATTTTTTTTAAAATTAACACTGTTACTTATTCTT TTATTTATGTGACATGTGACATTCATATTTTTGCATTTTTCTAGCCCGTATAATTCTGGTGTGAGCCCAGACTATAGCCC AAGTTCTCCGCAATTCAGGTATACATATATGCAGATGATTCATTAACTGCTAAAATGTATGGAAGGGGCATATATCTGAG AGCATGTCTGTTTTTGTTGTTGTTTCTGTTTGGTTATTTGCAGTCCCAGTACGGGTTACTCACCAAGTCAACCTGGTTAC TCACCATCGTCAACTAGCCAGTACACTCCGCAGACGAATGACAAAGATGAAAGAGGCAAAGACTGATGGAGGCGCTCAAT GAGGTAAAACTAATATCTTTACTGAAGCTTGTATTTGACTGATTATCTTATTGACCGAAGCTTTACTGTAACAAAAAACT TAAAAGACACGTGATTTAACAATATAAATGCAAAGACCTTTATACAAAAGACCTTCACATGTTCTTTTTACTAGACATAA AGTTGATTGAGAAAACCTTTCTTTTCTATCTTCTCCTATTTTTTAAAATTTGTTTGAAGGGTCTATTTTGCCAAAATATA ACAATAGGAAGGTTTACAAATGATGTCTGTTAGTCAGAAGGGTGAACCAACAATTCATTAATTTCACACTAAATATTACA AATTTCTGGAAGAGATGATGATATCCCGGGGGTTTTCTTTTTCTTGGAGGGGGGTAATGTAAATTCTTCACTAGTATATA CGAATTGGAGAGGGGGAAATGATTTGGATTTTGAGCTAGAGTTCTTGAGTTGTTTGTTCACAAGTAAATGTGCCTTTATC CGCCCTTCTGGCCTTGCAGAAAGTTGCAGAACTGTATAATGCTTTCTTATAGCATGTTACCCTGTCTATAATTTATGAGT TTTTAATTTATGCTTAATTGAAAAATATCTAAACCATTGTGGATGTTCAGACAATTTGAGGCAAGACGGAGCATTCTTCA GTTCTGCCGTGAGGGGACATTGAGATGTTCGTGGTCTATCAGTTTGCTCTGTATTAATCACCTAATATCAAAAACTTTGT TTGACATTAAATTCGAAGAGTTTGTCAACTCTGTCAAAAATCTTCTTTAGTAGTTGAACATTTTTTTAAATCCAGATTTT GTGTTTGGCTCATTTTGTTCTCCTAAGTGTCCATGTAAATTCTTGGGGACGAAGTTATAATTTTATGACACGGATGTTAA AAAATATATATAGATTTCCAGACATAGTTCAAAACAAATGGTAAATCCTGGTTTAGAGCATCTAATGTGCTTCCCTTCTC TAAATCGTACTGTGCTTATTTATGGAAGGTCATTTAGTGTATTTCTATTTTGTTGTGTTGGAGCAAATGCAAACTTGATT TCAAAATACCAGTGGAGAAGCAAATTTCATGTTAAGGGCTCGTTTGGCACGCCGTATTAGGCATGATAGTATAAGCT
CDS sequence (LotjaGi2g1v0377500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATATCCGCTTCCCTTTCTCTCCGGCGGAGGTTGCCAAAGTCCGCCTCGTCCAGTTCGGAATCCTCAGCCCGGACGA GATCAGGCAAATGTCTGTGGTGCAAATCGAGCACGGTGAGACGACGGAGAGAGGAAAACCGAAGGTTGGAGGGTTGAGCG ACCCTCGCCTTGGGACTATTGACAGGAAGATGAAGTGTGAGACGTGTACTGCTAGTATGGCTGAGTGTCCTGGTCACTTT GGCCACTTGGAGCTTGCGAAACCTATGTTTCACATCGGGTTCTTGAAGACTGTGTTGACTATCATGCGTTGTGTTTGCTT TAACTGCTCTAAAATTCTAGCAGATGAGCAAGATCATAAGTTTAAGCAAGCTTTGAGGATCAGGAATCCCAAACTTAGGC TGAGAAAAATTTTAGATGCTTGCAAAAACAAATCCAAGTGTGATGGTGGTGATGAAATTGACCTTCCTGGTCAAGATACA GAAGAGCCTCTTAAAAAGAGCCGCGGTGGCTGTGGTGCTCAGCAACCAAAGATTACTATTGAGGGGATGAAAATGATTGC TGAGTATAAAGCTCAAAGGAAGAAAAGTGATGATCAGGAACAGCTTCCTGAACCTGTAGAGAGGAAACAGACTCTGTCTG CAGAAAGGGTTCTCAGTGTTCTGAAAAGGATAAGCGATGAGGACTGCCAGTTGCTAGGCTTGAATCCAAACTATGCCCGT CCTGACTGGATGATTTTACAAGTTCTTCCAATTCCTCCTCCACCTGTGAGACCTTCTGTAATGATGGACACATCCTCCAG GAGTGAGGATGATTTAACTCATCAGCTAGCCATGATCATCAGGCACAATGAGAATCTGAAGAGACAGGAGAGGAATGGAT CTCCTGCACATATTATTTCAGAGTTTGCTCAGTTGTTGCAATTTCACATAGCCACATATTTTGATAATGAGTTGCCTGGA TTGCCAAGGGCTACTCAAAGATCTGGAAGGCCAATCAAATCAATCTGTAGCAGGCTTAAAGCAAAAGAAGGTCGGATTAG AGGTAACTTGATGGGGAAAAGAGTTGATTTTTCTGCTCGAACGGTAATTACACCAGACCCAACCATTAACATCGATCAAC TGGGAGTACCATGGAGTATTGCTTTGAATCTTACATACCCTGAGACTGTGACTCCATACAATATTGAGAGGTTGAAGGAA CTGGTTGAGTATGGACCTCATCCTCCGCCTGGAAAAACTGGTGCCAAGTATATCATTCGTGATGATGGGCAAAGGCTTGA TCTCCGATATATAAAGAAAAGTAGCGATCACCATTTGGAGCTTGGATACAAGGTGGAGCGACATTTGAACGATGGAGACT TTGTTCTCTTCAATCGTCAGCCTAGTCTTCATAAAATGTCTATCATGGGTCATAGAATCAAAATTATGCCTTACTCTACA TTCCGGCTTAACTTGTCAGTAACTTCTCCATATAATGCTGATTTTGATGGTGATGAAATGAACATGCATGTTCCTCAGTC ATTTGAAACTAGAGCTGAGGTGTTGGAGCTGATGATGGTACCAAAATGCATAGTGTCCCCACAAGCAAATAGGCCCGTAA TGGGAATTGTCCAAGATACACTCCTAGGATGCAGAAAAATCACCAAGAGAGATACCTTCATTTCAAAGGATGTTTTTATG AACATATTGATGTGGTGGGAAGATTTTGACGGGAAAGTTCCTACTCCCACAATATTGAAGCCAGAACCATTGTGGACTGG GAAACAAGTTTTCAATCTTATAATTCCTAAACCAATAAATCTGATCAGATATTCTAGCTGGCACAATGAGAGTGAAAGAG GACCCATAACCCCTGGGGATACGATGGTTAGAATTGAAAAGGGGGAACTACTTACTGGAACTCTATGCAAAAAGACTCTT GGAACATCCACCGGAAGTCTGATTCATGTCATTTGGGAAGAGGTTGGCCCTGATGCAGCACGTAAATTCCTTGGGCATAC TCAGTGGCTTGTAAACTACTGGCTTTTGCAGCATGCTTTTAGCATTGGAATAGGGGATACAATTGCTGACGCTTCAACTA TGGAGACTATTAATCAGACTATTTCACAAGCTAAGGAGAAAGTGAAACAACTCATCAGGGAAGCTCAAGAGAAGAAATTA GAGGCTGAACCTGGTCGGACAATGATGGAGTCTTTTGAAAATAGAGTGAACCAGACTCTGAATAAAGCTCGTGATGATGC GGGAAATAGTGCCCAAAAAAGTTTATCTGAGAGCAATAATCTGAAAGCTATGGTGACAGCTGGTTCTAAAGGAAGTTTTA TCAACATATCTCAGATGACTGCTTGTGTGGGCCAGCAGAATGTTGAGGGTAAGCGAATTCCATATGGGTTTGTAGACCGG ACATTGCCTCACTTTACAAAAGATGATTATGGGCCTGAAAGTCGTGGCTTTGTGGAGAACTCATATCTTCGTGGGCTGAC CCCTCAAGAGTTCTTTTTTCATGCCATGGGTGGTAGGGAAGGTCTTATTGATACTGCAGTGAAGACATCTGAAACTGGGT ACATTCAGAGGCGGCTTGTGAAGGCTATGGAGGATATCATGGTTAAGTATGATGGCACAGTTAGGAACTCATTGGGGGAT GTTATACAATTTCTCTATGGTGAAGACGGTATGGATGCTGTGTGGATAGAAACGCAGAAGCTGGATTCACTTAAAATGAA AAAAACAGATTTTGATAGGGCTTTTAGGTATGAATTTGATGATGAATACTGGAAGCCTACTTACATGCTTGAAGAGCCTG TAGAAGACTTGAAAACGATTAGAGAATTTCGTAATGTGTTTGAGGCTGAAGTCCAAAAGCTTGAAGCTGATAGGCATCAA CTTGCAACTGAAATTGCACCTACTGGTGATAGTTCTCTGCCCTTACCTGTTAACCTTAAGAGGCTTATCTGGAATGCTCA GAAGACCTTTAAGGTTGACTTCCGAAGGCCTTCTGATATGCATCCAATGGAAATTGTAGAAGCTATTGATAAGCTCCAAG AGCGACTTAAAGTGGTTCCTGGTGAGGATCTTTTAAGCCAAGAAGCTCAGAAGAATGCTACTCTCCTATTTAACATTCTG GTTCGCAGCACTTTTGCCAGTAAAAGGGTCCTGGAAGAATACAGGCTTTCTCGTGAGGCATTTGAGTGGGTTGTCGGAGA AATAGAATCAAGGTTCCTGCAATCACTTGTAGCCTCTGGTGAAATGATTGGTTGTGTGGCAGCACAATCAATTGGTGAGC CTGCTACCCAGATGACTCTCAACACTTTCCACTATGCTGGTGTCAGTGCTAAGAATGTCACCTTGGGTGTTCCCAGGTTA AGGGAAATCATTAATGTGGCTAAGAGAATTAAAACACCTTCTCTGTCTGTTTACTTGAAACCTGACGTCAGTAAAACTAA AGAGAGAGCCAAGACTGTCCAGTGTGCTTTAGAATATACCACTCTCAGGAGTGTGACTCAAGCTACAGAGGTTTGGTATG ATCCCGACCCAATGAGCACAGTTATTGATGAGGATGTTGATTTCGTGAAGTCCTACTATGAAATGCCTGATGAAGAAGTT GCGCTTGAAAAAATCTCACCCTGGTTGCTTCGCATAGAATTGAATCGTGAAATGATGGTGGATAAGAAGTTGAGTATGGC AGACATTGCTGAGAAGATTAACCTTGAATTTGATGATGATTTGACATGTATTTTTAATGATGACAATGCTGAGAAACTTA TACTTCGTATCCGTATTATGAACGCCGAAGGGCCCAAGGGAGAGATTCAGGATGATACTGCTGAAGATGATGTTTTCTTA AAGAAAATAGAAACCAACATGCTGACTGAAATGACCTTGCGAGGTATCGCAGACATCAACAAAGTGTTTATCAAAAATAC TAAAATTCAGAAGTTTGATGAGGTTGAAGGGTTTAAGCCTCATGAAGAATGGATGCTTGATACTGAAGGTGTCAACCTTC TAGCTGTAATGTGCCATGAAGATGTTGATGCATCGAGGACTACAAGCAACCACTTGATTGAAGTTATTGAAGTTCTTGGT ATTGAGGCAGTTCGGCGGTCTCTGCTGGATGAATTGCGTGTTGTCATTTCTTTTGATGGTTCTTATGTCAATTATAGGCA CCTGGCTATCCTTTGTGATACCATGACTTATCGGGGACATTTGATGGCAATTACGCGTCACGGTATCAACCGAAATGATA CAGGCCCTATGATGAGATGCTCATTTGAAGAGACTGTTGATATTCTGCTTGATGCAGCTGTATATGCTGAGTCTGATCAC TTGAGGGGCGTCACTGAAAATATTATGTTAGGTCAACTTGCCCCCATCGGCACTGGTGAGTGCGCCTTGTATCTTAATGA TGAGATGCTGAAAAATGCTATTGAGCTCCAGCTACCTAGCTATATGGATGGTCTTGATTTTGGCATGACACCTGGCCGTT CCCCAATATCTGGAACTCCGTATCATGAAGGCATGATGTCTCCAAGTTATATGTTAAGCCCAAATCTACGCTTGTCTCCT ACCAATGATGCACAGTTTTCACCTTATGTTGGTGGGATGGCATTTTCTCCTACTTCATCTCCTGGTTACAGTCCTTCATC TCCAGGTTACAGTCCATCATCACCAGGATACAGTCCCACATCTCCAGGGTACAGCCCCACTTCCCCTGGGTACAGCCCCA CATCACCTGGGTACAGCCCCACCTCTCCAACATACAGTCCTAGCTCTCCAGGATATAGTCCTACAAGCCCAGCTTATTCA CCAACCAGTCCATCTTACTCCCCCACATCACCGAGTTATAGCCCTACATCACCCAGCTACAGTCCCACCTCTCCAAGCTA CAGCCCCACATCTCCCAGCTATAGCCCCACTTCACCGGCGTACAGTCCCACTTCACCAGCATATAGCCCCACTTCACCGG CTTATAGTCCTACTTCCCCATCATACAGTCCTACTTCACCATCATACAGTCCTACTTCGCCTTCCTACAGCCCAACATCA CCCTCATATAGCCCAACATCTCCATCATATAGTCCTACATCACCTGCTTATAGTCCCACATCTCCTGGGTACAGCCCTAC ATCTCCCTCTTACAGCCCAACATCTCCATCATATAGCCCTACTTCCCCAAGTTACAATCCACAGTCTGCTAAGTATAGTC CTTCATTGGCATATTCTCCAAGTAGCCCAAGGTTGTCTCCATCAAGTCCATATAGTCCAACATCTCCAAACTATAGCCCG ACATCTCCATCGTATTCCCCAACATCTCCATCTTATTCTCCATCAAGCCCAACTTACAGTCCCAGCAGCCCGTATAATTC TGGTGTGAGCCCAGACTATAGCCCAAGTTCTCCGCAATTCAGTCCCAGTACGGGTTACTCACCAAGTCAACCTGGTTACT CACCATCGTCAACTAGCCAGTACACTCCGCAGACGAATGACAAAGATGAAAGAGGCAAAGACTGA
Protein sequence (LotjaGi2g1v0377500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDIRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTIDRKMKCETCTASMAECPGHF GHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADEQDHKFKQALRIRNPKLRLRKILDACKNKSKCDGGDEIDLPGQDT EEPLKKSRGGCGAQQPKITIEGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLSVLKRISDEDCQLLGLNPNYAR PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFDNELPG LPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKE LVEYGPHPPPGKTGAKYIIRDDGQRLDLRYIKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFISKDVFM NILMWWEDFDGKVPTPTILKPEPLWTGKQVFNLIIPKPINLIRYSSWHNESERGPITPGDTMVRIEKGELLTGTLCKKTL GTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQHAFSIGIGDTIADASTMETINQTISQAKEKVKQLIREAQEKKL EAEPGRTMMESFENRVNQTLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFVDR TLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGD VIQFLYGEDGMDAVWIETQKLDSLKMKKTDFDRAFRYEFDDEYWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLEADRHQ LATEIAPTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKVVPGEDLLSQEAQKNATLLFNIL VRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRL REIINVAKRIKTPSLSVYLKPDVSKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTVIDEDVDFVKSYYEMPDEEV ALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNAEGPKGEIQDDTAEDDVFL KKIETNMLTEMTLRGIADINKVFIKNTKIQKFDEVEGFKPHEEWMLDTEGVNLLAVMCHEDVDASRTTSNHLIEVIEVLG IEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDH LRGVTENIMLGQLAPIGTGECALYLNDEMLKNAIELQLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSP TNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTS PSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSP TSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTNDKDERGKD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 1567 | 1566 | 0.0 | – | |
| PANTHER | 2 | 1567 | 1566 | 0.0 | – | |
| Gene3D | 3 | 122 | 120 | 3.1E-33 | – | |
| SUPERFAMILY | 6 | 1469 | 1464 | 0.0 | – | |
| Pfam | 14 | 350 | 337 | 1.2E-110 | ||
| CDD | 18 | 871 | 854 | 0.0 | – | |
| MobiDBLite | 152 | 166 | 15 | - | – | |
| MobiDBLite | 152 | 173 | 22 | - | – | |
| SMART | 242 | 548 | 307 | 1.1E-198 | ||
| Gene3D | 264 | 315 | 52 | 2.6E-11 | – | |
| Gene3D | 342 | 514 | 173 | 1.3E-72 | – | |
| Pfam | 352 | 520 | 169 | 3.8E-71 | ||
| Gene3D | 385 | 451 | 67 | 1.3E-72 | – | |
| Gene3D | 524 | 681 | 158 | 2.4E-55 | ||
| Pfam | 524 | 687 | 164 | 2.2E-47 | ||
| Gene3D | 682 | 827 | 146 | 1.5E-56 | ||
| Coils | 694 | 721 | 28 | - | – | |
| Pfam | 714 | 818 | 105 | 4.0E-39 | ||
| Pfam | 825 | 1415 | 591 | 3.1E-105 | ||
| Gene3D | 864 | 902 | 39 | 2.3E-13 | – | |
| Pfam | 891 | 1075 | 185 | 2.8E-65 | ||
| Coils | 944 | 964 | 21 | - | – | |
| CDD | 1054 | 1466 | 413 | 0.0 | – | |
| Pfam | 1160 | 1294 | 135 | 3.6E-53 | ||
| Gene3D | 1160 | 1295 | 136 | 2.2E-56 | ||
| Gene3D | 1417 | 1460 | 44 | 7.2E-18 | – | |
| Pfam | 1536 | 1550 | 15 | 0.83 | ||
| MobiDBLite | 1538 | 1834 | 297 | - | – | |
| MobiDBLite | 1538 | 1745 | 208 | - | – | |
| PRINTS | 1540 | 1556 | 17 | 4.5E-9 | – | |
| Pfam | 1551 | 1564 | 14 | 0.31 | ||
| Pfam | 1565 | 1578 | 14 | 0.0021 | ||
| PRINTS | 1569 | 1590 | 22 | 4.5E-9 | – | |
| Pfam | 1579 | 1592 | 14 | 1.0 | ||
| Pfam | 1593 | 1606 | 14 | 0.11 | ||
| PRINTS | 1597 | 1613 | 17 | 4.5E-9 | – | |
| ProSitePatterns | 1606 | 1612 | 7 | - | ||
| Pfam | 1607 | 1620 | 14 | 1.7 | ||
| ProSitePatterns | 1613 | 1619 | 7 | - | ||
| PRINTS | 1614 | 1631 | 18 | 4.5E-9 | – | |
| ProSitePatterns | 1620 | 1626 | 7 | - | ||
| Pfam | 1621 | 1634 | 14 | 1.7 | ||
| ProSitePatterns | 1627 | 1633 | 7 | - | ||
| PRINTS | 1632 | 1657 | 26 | 4.5E-9 | – | |
| Pfam | 1635 | 1648 | 14 | 0.02 | ||
| Pfam | 1649 | 1662 | 14 | 0.11 | ||
| ProSitePatterns | 1662 | 1668 | 7 | - | ||
| Pfam | 1663 | 1676 | 14 | 1.7 | ||
| ProSitePatterns | 1669 | 1675 | 7 | - | ||
| ProSitePatterns | 1676 | 1682 | 7 | - | ||
| Pfam | 1677 | 1690 | 14 | 1.7 | ||
| ProSitePatterns | 1683 | 1689 | 7 | - | ||
| Pfam | 1691 | 1704 | 14 | 0.0095 | ||
| ProSitePatterns | 1704 | 1710 | 7 | - | ||
| Pfam | 1705 | 1718 | 14 | 1.7 | ||
| ProSitePatterns | 1711 | 1717 | 7 | - | ||
| ProSitePatterns | 1718 | 1724 | 7 | - | ||
| Pfam | 1719 | 1732 | 14 | 1.5 | ||
| ProSitePatterns | 1751 | 1757 | 7 | - | ||
| Pfam | 1752 | 1765 | 14 | 0.16 | ||
| ProSitePatterns | 1758 | 1764 | 7 | - | ||
| MobiDBLite | 1758 | 1825 | 68 | - | – | |
| ProSitePatterns | 1765 | 1771 | 7 | - | ||
| Pfam | 1766 | 1779 | 14 | 2.8 | ||
| ProSitePatterns | 1772 | 1778 | 7 | - | ||
| Coils | 1833 | 1834 | 2 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-directed 5'-3' RNA polymerase activity | Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'. | ||
| Cellular component | RNA polymerase II, core complex | RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template. | ||
| Biological process | Transcription, DNA-templated | The cellular synthesis of RNA on a template of DNA. | ||
| Biological process | Transcription by RNA polymerase II | The synthesis of RNA from a DNA template by RNA polymerase II, originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs). |
Expression pattern of LotjaGi2g1v0377500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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