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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0395000 |
| Transcript ID | LotjaGi2g1v0395000.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DA1-related 1; TAIR: AT4G36860.1 LIM domain-containing protein; Swiss-Prot: sp|Q8W4F0|DAR1_ARATH Protein DA1-related 1; TrEMBL-Plants: tr|A0A0B2RSU7|A0A0B2RSU7_GLYSO DA-related 1 protein 1; Found in the gene: LotjaGi2g1v0395000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:89256379..89263288) extracted from Lotus japonicus Gifu genome v1.2.
ATAAAACTTTTGAAGTGACATTAGTCTGATATTTTTATCTAAATTAGTTTTTTTTAGCAAATTATATATTTTACTAATTT GGCCTGTCTTGACCGAGGTTTAATATAAGTAAGGTGATAATCCATGTTGGTAATGCGTTGAAATTCAGCGGTCGTCACTG AGTCTCACTCCCATACTGTTGTTGTTATTTTATCCCTCTTATTCGTGTTTCTTTTCCACTTTCTTTTCATTCATTCTTTC TTTATTTTCCTCTCAAAAAAAAAAAAAAAAACCAATAACTGTGTATTCATTGATTCATGGGATTCTTGAATTTCGATTCT TCAGATTCCATTCTCTCTGCAGATTCTTAATCTCTTCCTTCCTTCTGAGTTCGCAATTCAACCTTGTTCCTTTTTTCTCT CTTCCATCCACTTTCGCCTCTCACAACTGAAGTTATCAATAAGGTTACTTCCTTTTTACGCAGCCCATTATATTGAAATC TTGTTGTCATCTTTCTTTCTTTAATTATTATATTTTCTTCAGAAAAAGGATTATCCTTTTGAATTAGATATATTGCAAAT AGTATTCTGAAAAGTGTATCAGTTGTGGAGAATCTTTCTGTGTCAGTCTCACTAATTTCTTGTTTGTTAATTTTTTTATT TAACTTTCCCTTTCCCTTTCCCTTTACAGTATTGAAGGCATGATGATCACATAGATGGTCTTTACTCTTGGTGCTGCCTT TTCTGTCATTGCCATTTCCTCAGCATCATAGCATTCTTTTTCCTTGTAATATTTATTCGTGTATTATATTGTCATTGATA GAAAACTTAACTTCTACAGAGACCACCATGCTGCATTTCAATTTTTAAATCTGTTATCAAGGCATAGTCTATATAGTTTT TCAATGAGCTTATGGTCTAAAGATTTTCCTTCTATGTAAATTTTGGAATAAATGTTGCTACTTACTTGTGGTTGTGGGGC ATATTTTTGTTAGGAAAAGGTTTGCTATTTTGAAGAGGAATAGAATAATATTGCATGCTATGGGTTGGTTTACCAAGTTG CTTAAGGGCTCCAACCATAAAATTTCCCAAGGACAATACAATGCCAAATATGGAGAAGATAGAATCTGGGATAATCATCC GAGTCCTGTGGTAATCGAAGCTTTCTTTTTCTAGTAAGAAATTCCAATGCCATGAGTTACAACTTATCATGTCATTAAGC TAGTTTTTTTTTTTTTTTTTCAATCTTGAATGCAGGATGATTTGACAGATATTGAGAAAGAAGAAATTGAATGTGCGATT GCACTCTCTCTGTCCGAGGAGGATCATAAAGGGAAAAGACCTGTTGGTAAGATTCATGCTTTTGTACCTGGGTAGTTAGA ATTCATTTACTGGACAATTTTGCTCAAATTCAATTCCATTAGTGATTTAGCATATGAGGTACTAGAACTACGTATTCTGC ATCTAACCAAAATTCTTATTGATTTATCACGCACTTTTGCATCGCTCCTGTCTTTTTATGCCTATCTTAGTGTCTTCTTC ATTCTTGTTGTATATGACTGTGTTTTATTGATAAAAGACTGCGATACCATCAGTTGAGTCGTTCTTGTGCATCCTAATAA CTAATAATTGTGGTACACTAAGAAATGAAATTTTAAATTACTACAATTAGCTTCTTTATTTCTTCAACATGCAATTTTCA TATGTATTTTAGATTTATGGGGATGTTTTGATTCTTGTGTTTCACTAAGGTTCCAACTCAAAGTGCTTAACATATATTTC TTATGGTTAGAGTCCATTGAAGAGATTCCATAGTTCCATTTTGTATTATGTGTTTAGACAAGGCTGCTGTTAATCAATTA ATTGTTCAAATGCTCAAGTATAACATAAAGGTCTCATGTATTGTGCCTCATAATTTCCCAGTGGAAGAAGACTCTCAATC TGAAGAAGATGAACAACTTTGTAAAATTGATGAGGAGGAAGATGAAAATCTCAGTAAAGTTAAATCAGAGGAAGATGAAC ATCTTGATAAAGTTCAAGTAGACGAAGATGAACTTCTTGCTAAAATTCAGGATGAAGAACATCTTGCTAAAGATCAACTT GAGGAAGATGAGCAACTTGCCAGGGCAATTCAGGAAAGTTTGAGAATTGATTCTCCTCCTCGATATGGCGGTGATTCAAT ATTTCCATTCCCCAACCTCTTTCCACCTGGATACAGGTAGTAGTAGGCATGATCACATCTTTATCTGTATTGCAAATCCA TCGAATGTTTATAGTAATTACTGAAGGTCACTATTTGCACCAAATAAAAGGAACAAGAACACAATGCTTGTACCGAAAAA ACTCCAAAGTTAACTTTTTTTTAAACTGTCACTTCGACGTATTGCTGAGTTTTGCTCAGATAATCTTAGAGATGTACATA TGTATTTTGCCCCTTGTTTTCCTTGCCCCTTTTTGTGGTTTTTCTCTTTTCTCTCATTGATGTCATTTTTTATCATTTTA TAACCTAAAATTTGTAACTGTAAAAGGAAAATTATACTGCTTGTCTTCACAACAAATAAATGAAATAATCAATGAAATGA AGCATGAAAATAATATAGCCATTGTTAAAGGGGGATGTATGTGGTAGTTGTTTATTTTAATGAAATCTGAATAGATATCA AAATCAACACTTGAAGAGTGTGGATAGATAAATTCTTCCAAAGTTCGACTTATGTTGTTAGTTGAGATCATATTCATATA CCTTAGCAGATGAATCAACAAATTTTTTTGGAGTGCTAGGCTATCCAACCGATTGATTTGTGTAATTAATCCTATTTTTG GGAGATTCTACTTCTAGTCTTTATCATTAAATTGGGATAAATACTGTATTAGGATTTTATGTATGAAACTTTGGTGTCTG TTCCTTAATATTTATATAGTACCTTTGAGTTATATAAAAAAGTTGAAACGATTAGTCATGAGAACAAAATAATAATTGGT TTATTTAGTCTTATCTATGGTAAATTGGTAACTGGTGTTAACTAAGAATATACTGGACATCTTTAAAAATTATTTTTTCA AAATTTCATGAATCTTTCTTATTAATTAATAACAAAGATTAAACTTGTTTCTGGAAATTTTACCTGAAGAGTCTGTGCTG GATGCAAAACTGGGATTGGCCAAGGAAGATTTTTAAGCTGCATGGGAGCTGTCTGGCATCCCCAATGCTTTTGCTGCCAT GCTTGCCATCTGCCAATCACTGATTATGAGGTTAGAATATTGTTTTCTTTGCTGCTTGCTCCACAAAACTGAATTTTTGA TTAAAATAAGTTGACACCTTTTTTTGGTGAAAGATAAGTTGAAAATTTGATCTGAAACTTGATAGTTACCCACACTTTGT GCAGGTGGAGTGAGTCGAAAAGAAGTTATAAAACTTAATAATAATATAGCTTTTACTGTTAATGTAAAAAAAATGACACA TACAATAGTACTTTTACACACTAATTTCAGACCAGAAAAATAAGGACTAAGGAGTGTTAGGGATCAATGTCCAGTGCGTG ATAGGTTTCGGCTAGAATGCTAAAGACCCTTAAGGTGAAGGGAGCAAAAATGTCTGAAATGGTGAAGGATGGGTATTGGA GGAGGCAAAGAAATAAATGTAAACCGTGTTCTCGCTCTCAGAAAACTATTAATTCATTGATACTTTATTTTTAAATGTTA ATTTTTGCAGTAACTGATTAAAGAAGTCTCATAAACAACTAGAATGGAAAGTGATTAAATTGATTAAGGAAGGACAACTC AGTGAAAAAACAGATATGTCAAGACCTGTTGATTGACATAGTAAATATAATCACTAGAGTGGTAGTCTTAGAGTACTCGC TTCAGAAGTTATGTATCATAATTAAATTCATAAATGAAGATCTTCAAACTGTTTCCCTCTTTTTTTAGTCTATCTCAATC TGGTTATGAATAATTTTTTAATGTTCATTTATTCCTTTACAGTATTCCATGTCTAAAGATCATCCTTACCATAAATCCTG CTATAGGGAGAAGCATCACCCAAGATGTGATGTTTGCAAGAACTTTGTAAGTATCTTAGCTGTTGTTTTTCACATTCAGT TAATTAGTCAATCCTGTTCTACGATCAATGGTTTCTCTCAATTTGGGTGTGCTTTAGAAATTGTACTACAATGTAGATAA ACATGGTAGATTAATGATGATAATGAGCTGTTCTCACTTCTCAGAAAATCAGAATTCTGAACAATACTTGAGGAAGTTCT GCTGAACTTAGTAGCTTTAGTCTTTGTGAAAAATCATTGGCTAGTTACCTAACTGAAGTAATATCATGTGAGAACTTCAT GGAGCCTATATAAGTTTGATTTTATGTTTCGGGGCTGACCATATAAGTAGAATTTCTTGTTAAATTTTAATAATTGGACG AGTCAGATGTAATGGTTTACTTCTGAAACTTCAGTGGCTCAGTACTTGGCAAGAAATCGTGGATTAACTTCCCAAATTTC AAACCATTGTGTTTTTGTTGTTCAAAGTTCAAACCTACTGAAGATATAGAATTTTCTAGTTATGTGTGTTTAAGTTTCTA CCAAAATATGCTGTTAAGAAATCGGACAAAAATAGCCCTGTTGACAGAAACTTGACATGAGTTTCATTTAATAGTTTGGT TAACCTCAAATCGCAATCATAGTTATTTACAGTCATACTTTAAAATGAGACTTCAGATGTCAAGGGAATTGAAGAAACCT TAATTTTCAATTGTCGGTCAAACCTTCTTCATTCTAAATGCCTAAGTTAATAAGTTGGCCTATAACTTATTTACTTGTAA ACATTTGATATGTCGATTGAATAAGTTTTCCTAGCGATGTTTTATTAATGGATAATTCCTTCTAATTAAAGCCTTCAACC CCTAGGAGTATGATTGCAACCAAAAAGATATCACAAAGCTGTAAATGAAATACCTTGAGCGTAGGAGTGCAATTGTGATG CTTACTCCTCCTCTTAAGAAAAAAGAAAGAAAACGAAGTCTGCCTTCTGAAAAAATTGCAAGTAATATATATATTGTACA ATGTACAGTGACCTGAATTATTGATTCTTTCATTGCAGATCCCAACTAATTCAGCTGGCCTCATTGAGTATAGAGCTCAT CCTTTCTGGCTACAAAAATATTGCCCGTCACATGAGCATGACGGAACTCCTCGTTGCTGTAGCTGTGAAAGAATGGAGGT CAGTTATATCAGCTTCCAAAACATTTCATCCTGTTATTCCCAATTAGGAGCTACTGATGGATCTCATCCCCTCTTCTGTT TCTGTCATTTCCTCTGATCTGATATGAAACTTTCTAATCAGTGCAGCCAAGGGATACAAAATATCTTTTGCTCAATGATG GTCGAAAGCTATGTCTAGAGTGTCTAGACTCAGTAATTATGGATACTCATGAATGCCAACCTCTCTACCTTGAAATACAA GAGTTTTATGAAGGTTTAAATATGAAAGTGAAGCAGCAGGTTCCTATGCTTTTGGTTGAGAGGCAAGCACTGAATGAGGC AATGGAGGGAGAAAAGAATGTAAGTGATCTATTGAACTTTCATTCATAGGATTTTGTTATTTTTCATCTTTCTTCCTGTC TTTCTATTGCCCTGACTTTGAATTGTTCTTTTCCTTTTCACTATTGAATATAGGGTCATCACCACTTACCTGAAACTAGA GGACTCTGCTTGTCGGAAGAGCAAACTGTCACCACCGTATGGATTCCTTACTCACAATTTCGAGTTGTCTCATGCTTTTG ACTCTGATATCATTTTTTTGTGTATTCAGTGATTGTTTTATATATTTCATGTAATGCCAGATTTTAAGGAGACCAAGTAT CGGAGCAGGGTACCAAACTGTAGACATGATAACTGAGCCACATAGATTGACGCGTCACTGTGAAGTGACAGCTATTCTTG TTTTGTACGGCCTTCCTAGGTATCTGTATACGATCAAATTCCATAACCTGCGGTGCTTTCATATCACATTCACTAATTCA ACAATTTTGTGTGCACAGATTACTGACAGGATCAATCCTAGCTCATGAGATGATGCATGCATGGCTCAGGCTTAAAGGTA TATTCAGCTATTCTGTGATCAGCATCGTGCAGAAAATTCATATTTTTGTTTCATGGTGCCACAGCTAAACAATGTTATGG TTTTGACTTTTGACAGGTTATCCCAACCTGAGTCCAGAAGTTGAAGAAGGAATCTGCCAAGTCTTAGCTCATATGTGGTT AGAGTCAGAGCTCTATTCAGGATCTGCGAATGGCGGCGCATCATCTTCATCCTCAGCACCACCATCCTCCTCTACTGCAT CGTCAAAGAAGGGTAAACGATCTGATTTTGAAAAGAAATTTGGTGAGTTTTTTAAACACCAGATTGAGTCGGATACCTCG TCAGCTTATGGAGATGGATTCAGATTGGGTAACCAGGCAGTGCTCAAGTATGGGCTCAAAAGGACCCTTGACCATATCCT GATGACAGGAAGTTTTCCAGTCTAAAAATTTGAAAGATGGCACAGTTTTTTTCACCTATACACTGACCACCATCTCAGCT TGGTCATATAAATTATACAGTTTAAGGATTCCAAAGTCTTAGAACACAGACAAAATAAGGAATAAAAATGCACCTCTTGG CGTGCAGTTGCAGTAATCTTATGTAAAATGTGAACTCCTGATGGTATAAATGTAACCATTAAACACTTCTCAGAAGTTGA GAAAAAAAGCTGATTAAATGAAAGTATTGAACTGATTTTGTACACTCTTGTGCTTCACTTTCCTGATACTCCTTTGCTCA TTTGGATTTTCTTCTCCCAACTTTTATGGTTTATGTTTTCACATGCTGATGTTTAGATGAACATTGTTAAAAGTGATTTT AGATAGAACTCATTTTATAAAATTGATTGT
CDS sequence (LotjaGi2g1v0395000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTGGTTTACCAAGTTGCTTAAGGGCTCCAACCATAAAATTTCCCAAGGACAATACAATGCCAAATATGGAGAAGA TAGAATCTGGGATAATCATCCGAGTCCTGTGGATGATTTGACAGATATTGAGAAAGAAGAAATTGAATGTGCGATTGCAC TCTCTCTGTCCGAGGAGGATCATAAAGGGAAAAGACCTGTTGTGGAAGAAGACTCTCAATCTGAAGAAGATGAACAACTT TGTAAAATTGATGAGGAGGAAGATGAAAATCTCAGTAAAGTTAAATCAGAGGAAGATGAACATCTTGATAAAGTTCAAGT AGACGAAGATGAACTTCTTGCTAAAATTCAGGATGAAGAACATCTTGCTAAAGATCAACTTGAGGAAGATGAGCAACTTG CCAGGGCAATTCAGGAAAGTTTGAGAATTGATTCTCCTCCTCGATATGGCGGTGATTCAATATTTCCATTCCCCAACCTC TTTCCACCTGGATACAGAGTCTGTGCTGGATGCAAAACTGGGATTGGCCAAGGAAGATTTTTAAGCTGCATGGGAGCTGT CTGGCATCCCCAATGCTTTTGCTGCCATGCTTGCCATCTGCCAATCACTGATTATGAGTATTCCATGTCTAAAGATCATC CTTACCATAAATCCTGCTATAGGGAGAAGCATCACCCAAGATGTGATGTTTGCAAGAACTTTATCCCAACTAATTCAGCT GGCCTCATTGAGTATAGAGCTCATCCTTTCTGGCTACAAAAATATTGCCCGTCACATGAGCATGACGGAACTCCTCGTTG CTGTAGCTGTGAAAGAATGGAGCCAAGGGATACAAAATATCTTTTGCTCAATGATGGTCGAAAGCTATGTCTAGAGTGTC TAGACTCAGTAATTATGGATACTCATGAATGCCAACCTCTCTACCTTGAAATACAAGAGTTTTATGAAGGTTTAAATATG AAAGTGAAGCAGCAGGTTCCTATGCTTTTGGTTGAGAGGCAAGCACTGAATGAGGCAATGGAGGGAGAAAAGAATGGTCA TCACCACTTACCTGAAACTAGAGGACTCTGCTTGTCGGAAGAGCAAACTGTCACCACCATTTTAAGGAGACCAAGTATCG GAGCAGGGTACCAAACTGTAGACATGATAACTGAGCCACATAGATTGACGCGTCACTGTGAAGTGACAGCTATTCTTGTT TTGTACGGCCTTCCTAGATTACTGACAGGATCAATCCTAGCTCATGAGATGATGCATGCATGGCTCAGGCTTAAAGGTTA TCCCAACCTGAGTCCAGAAGTTGAAGAAGGAATCTGCCAAGTCTTAGCTCATATGTGGTTAGAGTCAGAGCTCTATTCAG GATCTGCGAATGGCGGCGCATCATCTTCATCCTCAGCACCACCATCCTCCTCTACTGCATCGTCAAAGAAGGGTAAACGA TCTGATTTTGAAAAGAAATTTGGTGAGTTTTTTAAACACCAGATTGAGTCGGATACCTCGTCAGCTTATGGAGATGGATT CAGATTGGGTAACCAGGCAGTGCTCAAGTATGGGCTCAAAAGGACCCTTGACCATATCCTGATGACAGGAAGTTTTCCAG TCTAA
Protein sequence (LotjaGi2g1v0395000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGWFTKLLKGSNHKISQGQYNAKYGEDRIWDNHPSPVDDLTDIEKEEIECAIALSLSEEDHKGKRPVVEEDSQSEEDEQL CKIDEEEDENLSKVKSEEDEHLDKVQVDEDELLAKIQDEEHLAKDQLEEDEQLARAIQESLRIDSPPRYGGDSIFPFPNL FPPGYRVCAGCKTGIGQGRFLSCMGAVWHPQCFCCHACHLPITDYEYSMSKDHPYHKSCYREKHHPRCDVCKNFIPTNSA GLIEYRAHPFWLQKYCPSHEHDGTPRCCSCERMEPRDTKYLLLNDGRKLCLECLDSVIMDTHECQPLYLEIQEFYEGLNM KVKQQVPMLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQTVTTILRRPSIGAGYQTVDMITEPHRLTRHCEVTAILV LYGLPRLLTGSILAHEMMHAWLRLKGYPNLSPEVEEGICQVLAHMWLESELYSGSANGGASSSSSAPPSSSTASSKKGKR SDFEKKFGEFFKHQIESDTSSAYGDGFRLGNQAVLKYGLKRTLDHILMTGSFPV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 533 | 533 | 2.2E-288 | – | |
| PANTHER | 1 | 533 | 533 | 2.2E-288 | – | |
| SMART | 43 | 62 | 20 | 14.0 | ||
| Coils | 113 | 133 | 21 | - | – | |
| Gene3D | 120 | 297 | 178 | 3.7E-20 | – | |
| SMART | 128 | 147 | 20 | 0.021 | ||
| ProSiteProfiles | 128 | 147 | 20 | 9.785 | ||
| SUPERFAMILY | 160 | 193 | 34 | 1.29E-7 | – | |
| ProSiteProfiles | 166 | 226 | 61 | 11.365 | ||
| SMART | 167 | 219 | 53 | 3.6E-11 | ||
| Pfam | 168 | 223 | 56 | 7.2E-9 | ||
| ProSitePatterns | 168 | 202 | 35 | - | ||
| CDD | 168 | 220 | 53 | 2.69001E-26 | – | |
| Pfam | 317 | 528 | 212 | 2.6E-101 | ||
| MobiDBLite | 457 | 480 | 24 | - | – | |
| MobiDBLite | 457 | 476 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0395000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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