Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0398100 |
| Transcript ID | LotjaGi2g1v0398100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NBS-LRR disease resistance protein; TAIR: AT5G66900.1 Disease resistance protein (CC-NBS-LRR class) family; Swiss-Prot: sp|Q9FKZ1|DRL42_ARATH Probable disease resistance protein At5g66900; TrEMBL-Plants: tr|W0M160|W0M160_CICAR NBS-LRR protein; Found in the gene: LotjaGi2g1v0398100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:89516080..89521396) extracted from Lotus japonicus Gifu genome v1.2.
GAAATTTCCACTGAGCTGAAGGGAAGTCACGAAACAAAGACCTTAACATTCATGGTCAACGGATTTCTTTGTTTTTATAT GTTCGTGACTGTGTAGCATCATCTTCTCCTTCTGTTTCTCCTTTATCGTCAGTTCCTTTGTTTTCTGAGACAACCAAAGT TCACTGCGTTTCGAGCTGCATCTGTTCACTGTTACGGCGGAGCTTCGATCTCACCTACTGGAGCTCTGGAGTCATGGCGG ATCTCTTCACCGGAGCCTTAGCCGGAGCGGTGATGGGAGAAATGGTGAAACGCGCTCTCCAAACCATAGAAAACGGTCGA AAATTCGGACCCACTCTTGAAACCAACACACAAACCCTAACCGCTCTGGCTCCGTTGGTGGAAGAGATGATGAGGTACAA CGAGGAGCTAGATCGTCCCAGAGAAGAAATCGAGCCTCTTCTGAGTCACATTCGCGAAGGTGAAGAGCTCGTGCGCCACA GCAAGAAGCTTAGTCTATGGCGGTTTTTCTCGCTCTCCAGTTACCAGAGCAAGCTTCAGCGCAGTGACGAGAAGCTGAAG AGGCACTTGTCTGTTAACACGCAAGTGGAGAGTAAGAGGGATTTGATGGAGATCTTGTTGAAGGTTAAAGAAATTCTTGA GATTCTGGAGAGGAAGGAGGGTTTGGGTGGGAAGTGTCAGATTAGGGGTTTGAGTGGGGCTCCTGTGGAACCCAAGTGTT TGGGGATGGATGAGCCTTTGAACAAGTTGAAGATGGAGCTGCTCAAGGATGGTGTCTCTGTTCTTGTATTGACTGCTTTG GGTGGTTCAGGCAAAACCACTCTAGCTAAGAAGCTCTGTTGGGATCCTCAAATCAAAGGTAACTAGCTTCTGTTCTGCCC CTCTTTTTTCACTATAATATCATTCTCCTAGTCTAGTGAAATCACTAGCTTCCTTGTGTTGCATGAATTTTGGTAAGGGG ATTTAACACATTGAAGCAAACTATGATTAAGTGCATGTTTGGAAAACCTTCTATAATTGACTCTAAAGTCAGAGAAGCTT CTATGAGTAGCTTCTAGGTGTCAGAATTGATTATGAGGAAAAATAAGCTGATTTAAGCATCTCATAATTAATTGTAGCAG GTTGTATAGGAATTTCAGGAGACAAATAGTATAACATTTGAATACTTTTTTACTCCTCTAGGGAGACTGCCCCATTTTTA TTGTACCTATGGAATAACACCAAACCTGATGGAAATGAAGTTAATCAAAATGAAAATATAGATAGTAAATTTCATTATTT ATATACAACGTAGTTGAATGGAAAACTAAGTAATTCATTTCATTCAATTCCATTTTGTACAATTCTTTTGTACTCCTCTA ATTTGAGACTTTTTGATGGAACAAGCTTCTTTTTTACATTTTATGATAAAACTGTCCAAATAATGGAATACTAATCTTAA TTCATTGGTCCTATTCCATTTCATTTCATTGCAATATTCAAACATGGCCTCAGATTCCCCTTGGTTGAGAAAGCTATTTT GTTTTGACCAGGCAAGTTTGGGGGGAATATCTTCTTTATCACAGTCTCTAGAATGCCCAACCTGAAGACCATTGTACAGA CGCTATTTGAACATTGTGGATGTCGGGTGCCTGAGTTCCAGAATGATGAAGATGCAATTAACCGATTGGGGCTTCTGCTG AGGCTGGTTGGGAGAAATCCAACACTTTTAGTCTTGGATGATGTTTGGCCTAGCTCAGAAGGCCTTGTTGAGAAGTTTAA GTTCCATATGTCAGATTACAAGATTTTGGTGACTTCAAGGGTTGCCTTTCGAAGATTTGGCACCCCATGCCAGTTGGATC CACTTTGCCATGATCACGCAATATCCCTTTTTCATCACTTTGCTCAACTGAATGACAACAACTCATACATACCTGATGAA AATCTTGTCCATGAGGTGCGTTCTCTTCTATCCAACAAAATAGGTCACACCAATGAGACATGATTACATGTGATTAGAGA GAAATTTATGTTTCTTTATCATGTTAACCCTTTTTTCTAAGCTCTCAGATAAGTACTAGACTACTAGTATACTTGCATGC AACCAATTTATTCAAGTCTTTTATCTTATGCACTGATATTTCTTCCTTGCACTGAAATACAGATAGTGAAAGGTTGTAAG GGTTCACCGTTGGCACTTCAGGTTATTGCTGGGTCACTCTGCCGGCAACCTTTTGAGGTTTGGCATAATATGAAGGACCG TTTACAAAGTCAATCCATTCTTGAGTCTGGTGATACTGACTTACTTCGTCGCCTTCAACAAAGTTTAGATATATTGGAGG AGAAGTTCAATATCAACGAGAAGGAGTGCTTCATGGATCTAGGGCTATTTCCTGAAGACCAAAGGATCCCTGTTACTGCC CTTATTGATATGTGGGCAGAACTCTATAACCTAGATGAAGATGGTAGGAATGCAATGACCATTGTACATGATTTAACCTC CAGGAATTTGATTAATTTCATAGTTACAAGGTACATGGCATTTTTCCATCTTCACCTTGTTGCTTTTTTGGCCATTTAAT GCTTGATAATTGATATAATTACATACAGTCAAAACATTTCCTTATATGGCTTCAAATAGGGGTATATAAACTTGGCTTGT GAAATAAACAAAAAAGACTATACTAGGTGCTCTTATTTTAACTAGATGAGATTAATATAAAGGTTAAGCTTGGCTTGTTT AGTTCATTTATGATTTGATTATTTTCCCCCTTTATTATATCTCTTCTTACATAAAAAAAAATTACCTCTGCCTTTACCAA AAAAAAAAACTTTATTCTGAAAAAAGTGCAGCGTATTTTACAATGAACATAGAAATAATTGAGCTTAAGGTGAGCTCAAT TTTTTTATTTAGTTAATATAATAAGTTTGATCAATCATATGTCGGAGTTAAGCTCAAATTGCTCATGATTAGTTATCTTT AACACCCCTAACTTCTAATCTGTTTATTTAAATTTATGAGCATGTTTTTCGTTAAATAATTAGGTAAGTTATAGTAAAAA TATCTGTGTAGGAGTTTATATCTGTTCTTGAACTGAGGTTTAAAATCACTTTAGGAAGGATGTAGTTTGAAATGCATACC TTCATGGCATGTGATTTAAACTATCAACAAATCAAGAATTAAAGGATGAATGGGATACCTGTAACTTTCTGTGTGTCATG ATGAAGAAAAGAAGTAAAGCAATACTATCAAATGGATTAAATAATTCATCTTGTTAGTGTTTGGTTCTTCCGAGACTAAC TTATCTGCTCTTTCAGGAAAGTTGCAAGTGACGCAGGCGTGTGCTACAATAACCACTTTGTCATGCTGCATGATCTCCTC AGGGAGCTGGCAATCCACCAAAGTAAAGGGGAGCCATTTGAACAGAGAAAAAGACTGATTATCGACTTAAATGGAGATAA TCGTCCTGAATGGTGGGTAGGACAGAATCAACAAGGATTCATTGGCCGTTTGTTTTCATTCTTGCCAAGAATGTTGGTGA AACAGAAACAGCTTAGTGTTGCCGCCCGCATATTGTCTATATCAACTGGTATGTTTCTTTGACTTAATTACTTGCGCACA TATAAATGAAAGATGTGACTCCATCATGTGCTTAACCTGGTTGTATGACACATTATAAATTCTATATTTCAAGAGAATGT AAGTTCATTTGACTGAATCTATTCATTTCATTAAAGACCTTGCATATTGCATTTCACTTAATAATTAATTTAGGCATCAA AATTCAAAAACTAAGGAATTTTTTTGAAAAAGGTAATTGATGCCGTAGTATTCTAAGTTAACAAATTATTTGATAGAAAC TAAACTTTCAAAGTGACAACTATTGTGAAATGAAGTGAATAATAAGAAATAATCTGGTTCAATGTCATAACATCACTCCA TCCCTGACGTCCTATATGCTTTTGCAGATGAAAATTTTACTTCGGATTGGTGTGACTTGCGACCTGATGAAACTGAGGTT CTGATTTTAAATCTTTGCTCGAGCCAGTACTCACTACCGGAGTTTACAGAGAAAATGAGCAAATTGAAAGCTCTGATAGT TACAAACTATGGTTTTCACCGATCTGAATTAAACAAGATTGAGCTACTTGGTGTTTTGTCCAACCTGAAAAGAATCAGAT TGGAAAAGGTCTCTATCCCTCGCCTGTGCATATTGAAGAACCTGAGAAAAATGTCCCTTTACATGTGTAATACAAAACAG GCTTTTGAAAGTTGTTCTATCCAAATTTCTGATGCTATGCCAAATCTAGTGGAGTTGAGCATTGACTATTGCAGTGATTT GGTGAAATTGCCTGATGATCTCTGTAATATTACCCCATTGAAGAAGCTCAGTATCACTAACTGCCACAAGCTAAGTGCAC TGCCACAAGAAATTGCAAAGCTGGAGAATTTGGAAGTGCTAAGGCTTTGTTCCTGCTCTGATTTAGTAGAGATGCCGGAC TCTGTTGGAGGTCTTAAGAAGTTACGATGTCTCGACATCTCAGATTGTATTAATCTTCCCAAGTTACCAGATGACATTGG TGACCTGCAAAAGCTTGAGAAGCTTTACATGAAGAGTTGCTCAAACTTGAGTAGATTGCCATCTTCTGTCTCCAATTTTC AGCAATTAAATGTGATATGCGACGAAGAAAGGGCTGCCTTATGGGAAAATATCCCTAGCATTCCCAATTTGAAGATAGAG ATGCCTGCAGTAGATGTCAACTTGAACTGGCTCCATGGAGTTCGTTCGTGAGACTTGCTTCATGAATTTGATGAAGTGAC TTGGAATCGTGTTCAAGTTTGTAAACAATGTTGCTGCGCATTTGTTTAACTCTTCACCTTAACCTATTCCATGTAACTGT AGTAAAAAAAAGTAGGAGTTTATGTTGGACCATATTATATATGTAATACATTAATTATTGATGCTTGAAATAACATTTTT ATTTTAGTGTGCTCAGCTAGCTTATTCTCATTTTATTTTGAAAAGGTACCGATCTGAACTCTTAAGGTAGCAGACCAGAA GAATTACCGCAGTAGAAAGATGTGTTTGAGTTATTGAGTGTTTGGTCCACTTTTGGCCAAGCTCCACTTTTAATTTGGTT TGGGGTTATTTTTCTCCGGGTTGAGAAATGGGTTTACCGCATACTTGGTTTTCTTAGTCATCATTTAGTGCTTTTAGACA TCAATTGAGCACAACATGAACGGCTTTTATCTCAGTTTGCGCAACAAGAGTTTCGTTCACTTTTTTATTTTAAAATGAGC GTTAACCTCCATTTGTAACTCAATTAATAAAAAAAAT
CDS sequence (LotjaGi2g1v0398100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGATCTCTTCACCGGAGCCTTAGCCGGAGCGGTGATGGGAGAAATGGTGAAACGCGCTCTCCAAACCATAGAAAA CGGTCGAAAATTCGGACCCACTCTTGAAACCAACACACAAACCCTAACCGCTCTGGCTCCGTTGGTGGAAGAGATGATGA GGTACAACGAGGAGCTAGATCGTCCCAGAGAAGAAATCGAGCCTCTTCTGAGTCACATTCGCGAAGGTGAAGAGCTCGTG CGCCACAGCAAGAAGCTTAGTCTATGGCGGTTTTTCTCGCTCTCCAGTTACCAGAGCAAGCTTCAGCGCAGTGACGAGAA GCTGAAGAGGCACTTGTCTGTTAACACGCAAGTGGAGAGTAAGAGGGATTTGATGGAGATCTTGTTGAAGGTTAAAGAAA TTCTTGAGATTCTGGAGAGGAAGGAGGGTTTGGGTGGGAAGTGTCAGATTAGGGGTTTGAGTGGGGCTCCTGTGGAACCC AAGTGTTTGGGGATGGATGAGCCTTTGAACAAGTTGAAGATGGAGCTGCTCAAGGATGGTGTCTCTGTTCTTGTATTGAC TGCTTTGGGTGGTTCAGGCAAAACCACTCTAGCTAAGAAGCTCTGTTGGGATCCTCAAATCAAAGGCAAGTTTGGGGGGA ATATCTTCTTTATCACAGTCTCTAGAATGCCCAACCTGAAGACCATTGTACAGACGCTATTTGAACATTGTGGATGTCGG GTGCCTGAGTTCCAGAATGATGAAGATGCAATTAACCGATTGGGGCTTCTGCTGAGGCTGGTTGGGAGAAATCCAACACT TTTAGTCTTGGATGATGTTTGGCCTAGCTCAGAAGGCCTTGTTGAGAAGTTTAAGTTCCATATGTCAGATTACAAGATTT TGGTGACTTCAAGGGTTGCCTTTCGAAGATTTGGCACCCCATGCCAGTTGGATCCACTTTGCCATGATCACGCAATATCC CTTTTTCATCACTTTGCTCAACTGAATGACAACAACTCATACATACCTGATGAAAATCTTGTCCATGAGATAGTGAAAGG TTGTAAGGGTTCACCGTTGGCACTTCAGGTTATTGCTGGGTCACTCTGCCGGCAACCTTTTGAGGTTTGGCATAATATGA AGGACCGTTTACAAAGTCAATCCATTCTTGAGTCTGGTGATACTGACTTACTTCGTCGCCTTCAACAAAGTTTAGATATA TTGGAGGAGAAGTTCAATATCAACGAGAAGGAGTGCTTCATGGATCTAGGGCTATTTCCTGAAGACCAAAGGATCCCTGT TACTGCCCTTATTGATATGTGGGCAGAACTCTATAACCTAGATGAAGATGGTAGGAATGCAATGACCATTGTACATGATT TAACCTCCAGGAATTTGATTAATTTCATAGTTACAAGGAAAGTTGCAAGTGACGCAGGCGTGTGCTACAATAACCACTTT GTCATGCTGCATGATCTCCTCAGGGAGCTGGCAATCCACCAAAGTAAAGGGGAGCCATTTGAACAGAGAAAAAGACTGAT TATCGACTTAAATGGAGATAATCGTCCTGAATGGTGGGTAGGACAGAATCAACAAGGATTCATTGGCCGTTTGTTTTCAT TCTTGCCAAGAATGTTGGTGAAACAGAAACAGCTTAGTGTTGCCGCCCGCATATTGTCTATATCAACTGATGAAAATTTT ACTTCGGATTGGTGTGACTTGCGACCTGATGAAACTGAGGTTCTGATTTTAAATCTTTGCTCGAGCCAGTACTCACTACC GGAGTTTACAGAGAAAATGAGCAAATTGAAAGCTCTGATAGTTACAAACTATGGTTTTCACCGATCTGAATTAAACAAGA TTGAGCTACTTGGTGTTTTGTCCAACCTGAAAAGAATCAGATTGGAAAAGGTCTCTATCCCTCGCCTGTGCATATTGAAG AACCTGAGAAAAATGTCCCTTTACATGTGTAATACAAAACAGGCTTTTGAAAGTTGTTCTATCCAAATTTCTGATGCTAT GCCAAATCTAGTGGAGTTGAGCATTGACTATTGCAGTGATTTGGTGAAATTGCCTGATGATCTCTGTAATATTACCCCAT TGAAGAAGCTCAGTATCACTAACTGCCACAAGCTAAGTGCACTGCCACAAGAAATTGCAAAGCTGGAGAATTTGGAAGTG CTAAGGCTTTGTTCCTGCTCTGATTTAGTAGAGATGCCGGACTCTGTTGGAGGTCTTAAGAAGTTACGATGTCTCGACAT CTCAGATTGTATTAATCTTCCCAAGTTACCAGATGACATTGGTGACCTGCAAAAGCTTGAGAAGCTTTACATGAAGAGTT GCTCAAACTTGAGTAGATTGCCATCTTCTGTCTCCAATTTTCAGCAATTAAATGTGATATGCGACGAAGAAAGGGCTGCC TTATGGGAAAATATCCCTAGCATTCCCAATTTGAAGATAGAGATGCCTGCAGTAGATGTCAACTTGAACTGGCTCCATGG AGTTCGTTCGTGA
Protein sequence (LotjaGi2g1v0398100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADLFTGALAGAVMGEMVKRALQTIENGRKFGPTLETNTQTLTALAPLVEEMMRYNEELDRPREEIEPLLSHIREGEELV RHSKKLSLWRFFSLSSYQSKLQRSDEKLKRHLSVNTQVESKRDLMEILLKVKEILEILERKEGLGGKCQIRGLSGAPVEP KCLGMDEPLNKLKMELLKDGVSVLVLTALGGSGKTTLAKKLCWDPQIKGKFGGNIFFITVSRMPNLKTIVQTLFEHCGCR VPEFQNDEDAINRLGLLLRLVGRNPTLLVLDDVWPSSEGLVEKFKFHMSDYKILVTSRVAFRRFGTPCQLDPLCHDHAIS LFHHFAQLNDNNSYIPDENLVHEIVKGCKGSPLALQVIAGSLCRQPFEVWHNMKDRLQSQSILESGDTDLLRRLQQSLDI LEEKFNINEKECFMDLGLFPEDQRIPVTALIDMWAELYNLDEDGRNAMTIVHDLTSRNLINFIVTRKVASDAGVCYNNHF VMLHDLLRELAIHQSKGEPFEQRKRLIIDLNGDNRPEWWVGQNQQGFIGRLFSFLPRMLVKQKQLSVAARILSISTDENF TSDWCDLRPDETEVLILNLCSSQYSLPEFTEKMSKLKALIVTNYGFHRSELNKIELLGVLSNLKRIRLEKVSIPRLCILK NLRKMSLYMCNTKQAFESCSIQISDAMPNLVELSIDYCSDLVKLPDDLCNITPLKKLSITNCHKLSALPQEIAKLENLEV LRLCSCSDLVEMPDSVGGLKKLRCLDISDCINLPKLPDDIGDLQKLEKLYMKSCSNLSRLPSSVSNFQQLNVICDEERAA LWENIPSIPNLKIEMPAVDVNLNWLHGVRS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 824 | 824 | 0.0 | – | |
| PANTHER | 1 | 824 | 824 | 0.0 | – | |
| ProSiteProfiles | 1 | 150 | 150 | 12.283 | ||
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 15 | 15 | - | – | |
| Pfam | 2 | 135 | 134 | 3.4E-22 | ||
| Phobius | 4 | 11 | 8 | - | – | |
| Phobius | 12 | 15 | 4 | - | – | |
| Phobius | 16 | 830 | 815 | - | – | |
| Coils | 121 | 141 | 21 | - | – | |
| Gene3D | 152 | 303 | 152 | 2.7E-23 | – | |
| SUPERFAMILY | 157 | 416 | 260 | 7.3E-39 | ||
| Pfam | 167 | 390 | 224 | 9.6E-27 | ||
| PRINTS | 183 | 198 | 16 | 8.4E-15 | – | |
| PRINTS | 260 | 274 | 15 | 8.4E-15 | – | |
| PRINTS | 348 | 362 | 15 | 8.4E-15 | – | |
| Coils | 391 | 411 | 21 | - | – | |
| Gene3D | 543 | 801 | 259 | 2.2E-37 | ||
| SUPERFAMILY | 552 | 792 | 241 | 3.74E-24 | – | |
| PRINTS | 737 | 753 | 17 | 8.4E-15 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi2g1v0398100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…