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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0407000 |
| Transcript ID | LotjaGi2g1v0407000.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT5G67380.1 casein kinase alpha 1; Swiss-Prot: sp|Q08467|CSK21_ARATH Casein kinase II subunit alpha-1; TrEMBL-Plants: tr|A0A067KJN8|A0A067KJN8_JATCU Uncharacterized protein; Found in the gene: LotjaGi2g1v0407000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:90424868..90430468) extracted from Lotus japonicus Gifu genome v1.2.
CGTTGCGAAGCATTGATGACATGGCATCATGGCACGTGAGAGATATACGCACGAACCATCATCACACAACTACTAATACC ACTCTTTTCTTCGCTCCTTGCTTGCTAGCTATCGTGCACCTCACCCTGCTAGCGTGCGCATGTCCCCACCCATCGAATCA AACGCCACCATCGCTTCAAATCCGATCACCCATCGTTGAGATCTCAGATTCAGAGCCTCAATCCATGTCGAAGGCGCGTG TTTACACCGACATCAATGTTCTTCGTCCCAAAGAGTATTGGGATTACGAGTCTCTCACCGTTCAATGGGGGTAACTTTTC TCAAACCCTAATCTCTCTGCTGTTTTTGTTCACCAAAAGCACAATTCATGGTGAATGAAAATTTGTTGTGTGAATCTTAG TGTGTGTATGTAGTTTCTTAGCTGTTTGTGTTCTTCCTCGTTTGTTTTTCGATGATTTCAATAGCTTCAACAATTTCATC TCGCACATCATAGTTACCAATTTAGGGATAGGAATTATCAATTATGCCATTAGATTTGTAGTTATATCCTTTTGATTGGA TCTTATGCCTTTACATAGCTGATGAGGAATCACCTACTGTGAAATTAATTGATCAATTTTGTTCTCTGAATCCCAAATTC AGCTTCTTGTGCCAATTTTTTCCCTTGCTCACTTTGTTTCAATGGAATTGGTGGTTTTTGGAACCTTTAGGCTCTGTTTG TGAGTTGAATTTTGAAGGGAAGAGTAGGGAAATGGGAGACTTATGTGAAATCGAACCCTCCCTTGTTTGTGAATTTTGTA AAATGGGGAAGGGTTCGGGGAATTTCTGAAAACCTTTCAAGACTCTTATTCAGTTATTTTGTTGAGCTACCCCAATTTGG GGTTTTTTTGTGGAATTTAAAAATTTCCAAACACGGGGATGACTTCTTAATGTTAGTCCATATGTGGTTAATGTTTTAGT ACCCTTGATCCCCTTCCTATTACATTTTTTGTTCGAAGAATATTTTTTTTCCGTTAACATGCTTTATGGTTTCTTTCAGT GATCAAGATGATTACGAGGTTGTGCGAAAAGTGGGAAGGGGGAAATATAGCGAGGTTTTTGAAGGCATAAATGTTAATAG CAATGAGCGCTGTATAATCAAGATTCTCAAGCCTGTCAAGAAGAAAAAGGTCAGACTTTTTTCACTTGTGATGCTTTCTA TCCTTAGTTGGGAGGACCTGCAAATTTTAAATTAAGTCAGACAGGGTTGGTCATAGTTGTATTGTACAACAATCATTTCC AAAATAAAATCCAACTTGAACTTCATTATAGGAAAACATTAAACATAAGAACTAATAATACATAATATAATCAGTATTCG AAATTAAGAATCTAAATGTATGGCCAAGACTTCTATCAATAAATAAGTAAATAAATAAATAAAGAAGTGGAAGTCACAAT GATATGATTTGCAACATCTATATGGTAATGGTTTAATTACATAGCTTTGTTTTGGAGACTGGCATGTAGAGTTTCAGGTG AGATATGAATATCCATACTAGGCTTGTCAATAGTGTGTGAAAGCGGCGCTATTGTGGCTGAGCAGCCCCTGGCCGCTACG GCGAGTCCCATAGTGGAGCGGTTGATTGTCGCAGCCGTCACTGCTGGAATCGTGGCTGTTTTTGCGAACTTCGCAGCGCT AGAACGAAGATAGGGGAAAACTAAAAAATTACCCTCATAATTTGAAGATTAGGGTAAAATTTTAGGCGTAATATTGGGTT TCTGTCAAAATAAAAGAAGGGTAGTTTTGGGTTTCCCATAAAATTGATTAAGAACATTGTTTTTCCCTTCGCACATCCTG CCCTTCCCGATAAAGCGTCTACCGTCTTACCTGTTCTGCACCAAGCGACAGCCATCCAGCCACCGCTTATGAACATTGTG TGGGTATGGTGCGGGATAAGTATTATAGGTAATACGTCTAAACCCTCACATGTTCCCACAAATTTTTGCTGGTAATCTAG ACATAGATCACAACACATTTGATGGGTAAAAAACCTGACCCGTTGGTTCAAATCTAATGGCCATGATATGTGGGTATGCT ATAACATTGATACATGTTTCTGCCAATTTGATTTTCTGAATCGTTAGAATTGTTAAAATCAAATTCTTCTGGTCAAACCA GAATCCACCGTATAATGTAAATCTTAGGCCATGAAACACACCTTATGAAGTTCACCTTGGTTCCCATTTTTTAGAGCAAC TCCATATGAATTAGAAACATACCTTCAGTTTTTATTCTTTTTTGTTTTTGTTTTAAATTGTTTGATGTACTGTGCCATTT CAATTCTTCTTAGAAGTATTTCTTATTTTGCAAGCTCTTTAACAATCCACAGATTAAAAGAGAGATAAAAATACTTCAGA ACCTTTGTGGAGGCCCAAATATTGTCAAGCTTCTTGATATTGTCAGAGACCAACATTCAAAAACTCCTAGCTTGATATTT GAGTATGTCAACAGTACAGACTTCAAAGTTTTGTATCCAACCTTGACTGATTATGACATACGCTATTACATATATGAGCT CCTAAAGGTAATGTGATACCTCCTGCACCTTACTTGGGACTGTTATTATATGTGTCATCTCCATAATCAACATACTGGTC TTCCCTTATATAATTTTCTATACTCTGTCTTGAATAAGATTCCTACATGAATTCTGCGTTCGGTTCATGCATATAAATCA TAAAAATTATTACTAATATATCAGCCTTTCATTGTACCTGAGTGCTTTAGTTTTAAATTGCAGGCCTTGGATTACTGTCA TTCTCAAGGCATAATGCATAGAGATGTCAAGCCTCATAATGTTATGATAGATCATGAGTTGCGGAAACTTCGCTTGATAG ATTGGGGTCTTGCTGAATTTTATCATCCTGGAAAGGAATATAATGTTCGAGTAGCTTCAAGGTAACATCATTTTAAAAAT AGACATGTTCTCGAAGCACATGTGTGAAATAGAAAAGCTCAAACGAGTGCATTCATATATGGCTTAAATCAAAATCAGCA AGGTTTGACTCAACTTAGATTTTTCAAAATGTACAATTGTTAGGAAACTGTCTAAATTTTTTATTTTCGTCATAAAAGTA ATTCTGGAGTTCTGGAGGCATGAACCAAGAGTACATCAGTTATATTAAAATTTAGCACAAATACTTTTTTTTCTCAACTT AAGTTATAATCATTAATATACATTTATTTTATTATTGTTGTTACATTTTGAGTATTATACCTTGAAATTACATATTGATT TATTTGTAGATTTAAACGTGTTGGCCGACACAATGATTTATCATATCTTACTATGAAGTAAGATTTAAAATAGGCTTTAA TCCTACCAGCCCAACCTTTTTCTCAACCTATTAGCCTATAATCATGTTGCCCTGTTTATAATATGTTTGTTTTATTATAT TTTGGGTCGTTGCCTATAACTCTGTTGGCCTATGTACTTTAAGAGCAAATTATGAAATACTCATTTAAACAAGCTACCAG GCTTTTAAGATTAGACTAGGCCTTGAAAAATCCTACGACAGTTAAAAGACCAGACTTGGGTCTCAAATTTTTTTAATTAG ACCAAAGCTTAGCCTAAACCAGCCTATTCGACCCCTAGTTGTTGGTTAATATATGTGACGTTTCTTTCAGTCACTAAACA TAGCGACACTTTAAGATTTCTTGCAGTCACTAACTCATTTGTGCAAGATAAATCTTATCTACAGATTATAGCACAAAGTT TCCTGACATTTGTGTAAAATATTGATCGACTTATGGCTGGAATAGTCCTCATTTGCCTAGGTTTTTATTCCATGCTTTCA AGCTTCTTGCAGTGTTTGCCAAGTATGTTAAAATTAACCTATGGTTTGATGTGATTTTAGCGGTTTCTACTCCTTTGAGC TGTCTCCCTCTTATTTTTTCAGGCCGAAACAAATTCCTGCTTTTTGTTTGATTACCTAAACCCAAACCCGACACTGAACT TCTGTAAACACTTATTAGTAACATGTTGCAAGTTTGTAATCTTCTATAAAAGACCATACTTAGCTTATTTTATTACAAGT ATTTGCTTACCATTACAGTTCACTTATTTGATTACAAGTATTTGCTTACCATCACAGTTCACTTATTTGATTTCTTATTT ACTTAACTTAAATATATATATATATATATATATATATATATATATATATATATATATATATATATTTGATTCTGAAATCA TAGGTTAGGTTAAAACTTGACAAAGGAAAAATGGTTATTTAAATTTCGTAGACTTTTATTTTATAATTGCTATGTGAGCG AAAGATGTGGTTTCTATATTTCTTAAATGCCACCTATCAAAACCAATTGTCATATTATGGGTACTCTGTTTCTCAGATAT TTTAAGGGGCCTGAGCTTCTAGTTGATTTGCAAGACTATGACTACTCATTAGACATGTGGAGCCTCGGCTGCATGTTTGC TGGAATGGTGAGAATTATTGCTGCAAGTTACTGGTTATATATGGCATACTGTTGACATTATTTACGCAGATAGTTGAGCA TCCACAAATGTAGATGTATAATTCTGGGTCATAATTTGTTCGTTGTACTTTTATGTAGATATTTCGCAAAGAGCCTTTCT TTTATGGTCATGACAACCATGATCAGCTTGTCAAAATAGCTAAGGTAATATTCATGTTGGTTTACCATTACTTTTGAAGG TTTAATTATCTTGCTAATGCTTTACAAATTAATTTCATGTTTTAGTTCCAGAATATGATATCTTGTGATCTATTCAATGT AGGTTTTCAAAGCATAAAATCATTGATCATTTGTTTAGCATATCAAAATCATAGACCAGATTTAAGTTTTTATTAGATAT TGTTCATTATTATTTGTTATCTGCATTCTGCAGGTACTTGGAACTGATGAACTGAATGCATATCTTAATAAGTATCATCT GGAGCTTGATCCTCAACTTGATGCACTTGTTGGAAGGTATCGTCTTCTAGCTGATCTTCCATTTATTTCACTGCAAGTTG AATTTAGTTAATTCTCAACTTTTTATCAAAAATTCTTCTGTGGCAATGTAATATACTAATCTCTGCCCAAGCTCTCTTTG GTAGATAGATGAAGTGTTACTACCTTAATACATCATACATAATTTATATCTGACTATTTTCTTTGACAGGCACAGTCGCA AGCCCTGGTCTAAATTTATCAATCCTGATAATCAGCACCTTGTGTCTCCTGAGGTCACTTGAGCAATTTTCTAATCTGGC ATTGACATTGTATTTAGTGTATTCTGCAATTTAACAATTATTGTTTGTGTAGATTTTTATTTCTTTCCATATGTCTGACA TGCAGGCAATTGATTTTCTTGATAAGCTCCTTCGGTATGATCACCAGGACAGGCTAACAGCAAGAGAAGCAATGGTAATG TTTAAGGGCTCATTAATTCGTAGTTCTATTTTTTCCAACTGAGTTGTTTTTTAAATTGAGTGCTCTAACCTTTTGCTGCC ATTTTGGTGCATATCCCGCAGGCACATCCTTATTTTTCTCAAGTAAGGGCAGCAGAAAGTAGCAGAATGAGGACACAGTA A
CDS sequence (LotjaGi2g1v0407000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCATGGCACGTGAGAGATATACGCACGAACCATCATCACACAACTACTAATACCACTCTTTTCTTCGCTCCTTG CTTGCTAGCTATCGTGCACCTCACCCTGCTAGCGTGCGCATGTCCCCACCCATCGAATCAAACGCCACCATCGCTTCAAA TCCGATCACCCATCGTTGAGATCTCAGATTCAGAGCCTCAATCCATGTCGAAGGCGCGTGTTTACACCGACATCAATGTT CTTCGTCCCAAAGAGTATTGGGATTACGAGTCTCTCACCGTTCAATGGGGTGATCAAGATGATTACGAGGTTGTGCGAAA AGTGGGAAGGGGGAAATATAGCGAGGTTTTTGAAGGCATAAATGTTAATAGCAATGAGCGCTGTATAATCAAGATTCTCA AGCCTGTCAAGAAGAAAAAGATTAAAAGAGAGATAAAAATACTTCAGAACCTTTGTGGAGGCCCAAATATTGTCAAGCTT CTTGATATTGTCAGAGACCAACATTCAAAAACTCCTAGCTTGATATTTGAGTATGTCAACAGTACAGACTTCAAAGTTTT GTATCCAACCTTGACTGATTATGACATACGCTATTACATATATGAGCTCCTAAAGGCCTTGGATTACTGTCATTCTCAAG GCATAATGCATAGAGATGTCAAGCCTCATAATGTTATGATAGATCATGAGTTGCGGAAACTTCGCTTGATAGATTGGGGT CTTGCTGAATTTTATCATCCTGGAAAGGAATATAATGTTCGAGTAGCTTCAAGATATTTTAAGGGGCCTGAGCTTCTAGT TGATTTGCAAGACTATGACTACTCATTAGACATGTGGAGCCTCGGCTGCATGTTTGCTGGAATGATATTTCGCAAAGAGC CTTTCTTTTATGGTCATGACAACCATGATCAGCTTGTCAAAATAGCTAAGGTACTTGGAACTGATGAACTGAATGCATAT CTTAATAAGTATCATCTGGAGCTTGATCCTCAACTTGATGCACTTGTTGGAAGGCACAGTCGCAAGCCCTGGTCTAAATT TATCAATCCTGATAATCAGCACCTTGTGTCTCCTGAGGCAATTGATTTTCTTGATAAGCTCCTTCGGTATGATCACCAGG ACAGGCTAACAGCAAGAGAAGCAATGGCACATCCTTATTTTTCTCAAGTAAGGGCAGCAGAAAGTAGCAGAATGAGGACA CAGTAA
Protein sequence (LotjaGi2g1v0407000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASWHVRDIRTNHHHTTTNTTLFFAPCLLAIVHLTLLACACPHPSNQTPPSLQIRSPIVEISDSEPQSMSKARVYTDINV LRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNSNERCIIKILKPVKKKKIKREIKILQNLCGGPNIVKL LDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWG LAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAY LNKYHLELDPQLDALVGRHSRKPWSKFINPDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFSQVRAAESSRMRT Q
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| SignalP_EUK | 1 | 40 | 40 | - | – | |
| TMHMM | 21 | 40 | 20 | - | – | |
| Phobius | 21 | 38 | 18 | - | – | |
| Phobius | 39 | 401 | 363 | - | – | |
| PANTHER | 64 | 401 | 338 | 3.8E-241 | – | |
| PANTHER | 64 | 401 | 338 | 3.8E-241 | – | |
| SUPERFAMILY | 71 | 391 | 321 | 7.01E-78 | ||
| CDD | 83 | 387 | 305 | 0.0 | – | |
| Gene3D | 102 | 178 | 77 | 6.0E-113 | – | |
| ProSiteProfiles | 102 | 387 | 286 | 43.255 | ||
| SMART | 102 | 387 | 286 | 7.4E-76 | ||
| Pfam | 102 | 387 | 286 | 1.9E-65 | ||
| ProSitePatterns | 108 | 131 | 24 | - | ||
| Gene3D | 179 | 387 | 209 | 6.0E-113 | – | |
| ProSitePatterns | 215 | 227 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0407000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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