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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0412400 |
| Transcript ID | LotjaGi2g1v0412400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Branched-chain-amino-acid aminotransferase; TAIR: AT3G49680.1 branched-chain aminotransferase 3; Swiss-Prot: sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase 3, chloroplastic; TrEMBL-Plants: tr|I3S9H6|I3S9H6_LOTJA Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi2g1v0412400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:90932364..90938724) extracted from Lotus japonicus Gifu genome v1.2.
ATTAGAGTCTATACAGTTGGGTGCGGATCAACACCGACGGATTTACCCGGTTCCTGCTAATCAGAAAACTGACATCTCAT CAATCCTCTCAGCCGTTTGAAGTCAGAAAACGACAGTTAAGTCAACTGCTATTGCCACACGCGCGTCCTGAATCCATTCG TTCCTTCTATATAAGCCGCCAACGCAACAAAGCGCAATTTACCCTCTTTTCTCGCACGTGCCTACCCTACTTACCCTCTT CTCTCTCTCTCTCTCTCTCTCTCTGCTCTGCGACTGTAGTGAGAAATCAACAATGGAGTCCAGCGCCGTCCATGCAGCCA CCATTCGACTCACTCACCCGATCTCTTCATCACGCCCTTTTCTCTCCCACCCATTCAAACCCTCCAATCTCAATCTCAAT CTCAATCTCAATCTCAAGGTACACACACATTTCCCTTTTCCCTTTCTCCTTCTTCACCTTCTTCCCTAATTGATTTTCCG TTTTTGCAGCTTCAACACAAGTTTCCTCTCGCTTCTCACAATCCCAGTCTTCTCCAACCACTTTCCGCCACTCTTTCTGA TGCCCACAGGTTCCTTCCTCCTTCCTTTCATTTTCTATTATGCTCTGGTTTTTAATCTTCAGTTTTTGAATTGCATTGGC ATGGAATGGTGCAGTGAAACTGAAAACGTGGAGTTAGCGGACTTAGATTGGGACAATCTCGGATTCGGACTTCAAACTAC TGATTACATGTATGTCATGAAGTGCCCGCATGGTGCAGAGGGAGTTTTCTCCAAGGGTGAACTCAAGCGCTTTGGGAACA TTGAATTGAACCCCTCCGCCGGAGTTTTGAACTATGGCCAGGTTAGATTTTGTCTCTCAGGCTCAGCATAAGGGTGTCAC TATTCATGATAATGTTACTGGTTTATTTGGGATAGGGTTTTTGGAGGGGAAGAAGGGTTTAGGCAAAAAGTCAAAAATCT CTCTATGTTTGATTGAGTGATTTTCAAATTGCAATAGAATCTGCTTTCTGTCTAATATGAGTAAGCTCTAACAATTTGAA GAATTATGTCAATTCTAATTAGGGTTGGAATCTTACTGGTATATCATTTACATTTTAATTGAATTTGCCTAGAATTTATT TTTCTGGTTCACAAATGTAGGGGTTATTTGAGGGCTTGAAAGCCTACCGGAAACATGATGGCAATATACTCCTCTTCCGT CCACAAGAAAATGCCTTGCGGATGAGGATGGGTGCGGAGCGGATGTGCATGCCTTCACCTACCGTGGAGCAGTTTGTGGA AGCTGTGAAGGAGACTGTTTTAGCAAATAAACGTTGGGTACGATAGAACCCTATCATTGCTGTAAATATATTCTAGAGTT TGTGAAATACACAGTTAGTTTGATTTAGTGAAATTTTGTTCAGGTTCCCCCTCCAGGTAAAGGCTCCTTGTATATTAGAC CATTGCTAATGGGAAGTGGACCTGTACTTGGTCTTGCACCTGCTCCGGAGTACACCTTTCTAATATATGTTTCACCTGTT GGGAACTACTTTAAGGTAAATACCTACATTGTGCTACATTTAAATATGGCATTTTTGTTTTGGTTATATAAGTTTTTCAT TATCTTTTATATGTTATTAAAAGGTTATAATCCTAAATTCCTAATCCCACAAGCAAGACAACTTTTATAGGTTTACTAAA AAGTAGCTTAGAGTTAGTGCTAATATTATGATTATCAGATGCAAAATTGATGAGCTTAATTTTGACATGTTTTTATGATG TGACTGAATGGGTTGAATTGCACTTTACAAGTATGAAAAATCTTGTAGCTGTATTCTGGGGGTCCAGAATGTTACCCCTT TTTTCTTCTTTGTAAGATTTATTGCAAGGCCTGAATGAAGCTGGCCATGATAATCTTTTTATCATTTCCAACATAACTAA TCGCACTCATGTTTTTCTACATCTTCTGCTTTTGCATTTTAAACATACTTATGCACTTTAAAAAGTTTGTGGAGTATCAA TATCACCACAGGAAGGTTTGGCTCCAATCAACTTGATTGTGGAGAATGAACTACATCGGGCAACTCCTGGTGGCACTGGA GGTGTGAAGACCATTGGCAACTATGCTGCGGTAAGCCAGACTGCATGCCCTTCTCTTTTCTTGTTTGTTTGTCCACTAAC ATATGGTTGCATCTGTTCTCTCTGTTTACCTTAAATTTCAATCATCAGCCATTTCAAACTGAAGTTTTTCCTCATTTTTT CATTTGATATTTCTAACAAATACAAAACAATTGCTTTCTTGCACTGCTGACTAAGGAACATATAGTTGAAAACTGAGGAT TTTCTTGAGCTGCCTTCATTTTTCTTCCTATTTTTAGTTGATGTAGCTGACGTATATAACAACAACTTCTGAATTCCAGT ATTGGCTTAAGCCACCTGTTTGATTTCTTAATTCTCATTTCTCGCCTTTGTCATACATCACCCTTTTTTTAAGTCCTGAC TTTTCTCTGAGCACATGCACAATTATTCTATGCAGGTTCTGAAGGCACAGTCTGCTGCAAAAGCTAGAGGCTACTCTGAT GTTTTATATCTTGACTGTGTGCACAAAAAATATTTGGAGGAGGTTTCTTCCTGTAATATTTTTGTTGTTAAGGTATTATA TTTAGCAAACCAGTTTGAACTTAAGATTTTGTTTATATACATGTGTATGTGTGTGTGTATGTATAATGGTTGTTATGCAT AATTGTTAAAAATTACATGCATTGCTTTATTTGCTCAATTGCACCTTCTCTTTTCTCTCACAATACAATAAACAATTTTC CTAGAAATATACCTGCTGGGATAGTGGATTACTTCTCATAGTAATCAGAATCACGATGGATATTAGTGCAACTACAATTT GTCTACTAATTTCCTGAATGAACCCCATCACCTGATTTGTGGTTGTCTTTTAGCTATATCTGCAAAATCAGTGTGGTAAC CTCTTGGTCCAGGATCCTCACTAGTCACTGTTCAGTTGTCGCCTCAAATAGTTGTAACCTATGCAAATTAGAAGCTTTAC TTAAACCCTCTCCTCTATGCTGTGTGTCTTTTTCTATTACATTTTTGAAATTTGAAATGTGGTATAAATCATTTTGAGTT CTTATAGAGCCCGTGAGTTTGCTGGGTTGGAGGAGGACCAGTTGGTAGATCCAAGTCCAAGGAAGTTGACAGCAGGTCTA TTATTAAGCATAATGGGCCGCAGGGTAACCAAGCTAGACCCTAAAGAGAAGTCAGTTAAAGACTATTAGGAGGTTTGTTA CAGGTAGTTAGAGAGGGACTGCAATATGTACCGGGGACTTAGAAAAGTGAAGGGTCTTTTGGCTGAGACTAGTAAAGTTG TTAGGAGAGTCCTAGTTCTCTTTAATTTCTTTGGCATGGTATATCTTTCATTAAGTCCATAAATGATAATTTCCCTTTCT TCAATAAGACATCCACAGTTTTCTAGCCATTTCCTGTACTGGTATCAGAGCTCCACTTAGAGAGCTGTGGGTAGCCTTTT CAATCAGAATGAGCGTGATGCTTGGTAGAATTCAGGTCACGGACAACCCATTAACCGTGTTACAATCTGGGTTTTTAAGT TTCTAAACCTTGAAATTTAATACTCTAAAAACTTGACTCCTTTCCCCCCTCTTCTCTAAACATGCAGCCTCCTTTGTTCT CAAGCGCGCGTGTTTGGATTTCCGTTGAACTTAATGTGGATCCACGTTGAAGTCAACATGTCAAAATCTTGTTTCGCCGA TCCACGTTAAAATAAGCATGGCAAATTCTAGCTTCTCCGTTGATGCACTGAGATACGTGAAATCACGTTTGCTTTGGTTC TAAACCAAAGCAAACGTGCACTATTTGAGGCCACCAAATGCGATTCTGATACCGTTTCAACATGGGGAGGTCAAGTGTGA TAGTAGAGTCATGCGATTCTACGTGGTGAATCGCGAATCTGTCAATTTTGGAAGAGTTAGTTATATATGTTGTAGTATAG GGTAGTAGGAGGTATCTGTAATCTGTGAGATGTATGAATCTAAATGATAAGAAATACTCTCAATAGGAGACTCTGCAATC TGTTATTAAACAGTGTAATCAATAAAATTCCCCTCTTGATTCATTGTTGGGAGTCAACTTTCTGTAGAATCCCACAAAGA TATCTCACCGCTAACCTGGTGGCTTTAATCTTGGCTCTTTTACACTGGTCTTAATAGATTCTTTAATTTCTCATAATTCT TGTCCAGATGATTATGTTTTTTAATCTTTTGTTGCTGTATGTTTTCCTTAGCCTGCATTTTGTGTAACTTCATCGGTGCT AATGTGTATGTTTCATGATATCATTTTCCCCCTATGTTCAAGTTTATATATGTGGTTGGTTCCAGATCACTATTTCTTTA GAGCTCACTGCACTATGCTACTCTTGTTTCCATGTGCTTTTAGGGTAACGTCATTTCAACTCCTGCTGTTAAAGGAACTA TCCTACCTGGCATTACTCGAAAAAGTATAATTGATGTTGGTCGAAGCCAAGGGTTCCAGGTAATTGATATTTAGCTTAGG AGATGATTGATGAATATTAATTTTTGATATCTAGCATTTTTATATATTTTTTTACAAAGTTATGGTCTCAAAACTAAATA TGAAAAATTGGATTTTGGATATTTGCTTCTCAAAACTAAATAGGGTATGACAGACGTGGTTTGCAAATCTAGACCAGTGT GTGATTAAACTTGGTCTCAGGTTCAAGACTTTCACCTTAAGAAGTTGCCGATCAGGCAATGAGGAATACTAATTCTAAAA AGAATTTTTTAACAATGCAATCTTCATTTAATGTTGCTCAATTTTGGCTCACTCCAGTGATTGGAATATTTTTTTATTGT GATGATCTATATTAACAATTTGAAACTTAGCTAATGCCATGTATAAGATAAATGAGTTTTCACAGTAAAAAACCTTCTCA GACTGCATAAGTCTTAACATTTCTGGGGCGATTCTAGAATGCTCCTTGGTTAGGTCTTGTTCGCCTTTATTTCTTTTCTC TATTTATTTTTTTCTTAATCAATTATTGTTGCTAAGTGTTCCTCAAATTCCATTCATAGTAAAATAATCCTGCTATGAAT CTTCCGATAAAAGCTTAATAGGATTGAGGTTTACATTTTTGTATTCAGATGCCACTTTGACTTTTGTTTCTATCGGCATT AGGCCAAAATACACACATTTATTTGTTCATTTTCCAATGTTCATCTGGTGTGTACCAGGTTGAGGAGCGACTAGTGTCAG TGGATGAATTGCTAGATGCTGATGAGGTTTTCTGCACGGGAACAGCTGTGGTTGTATCACCTGTTGGCAGTGTCACTTAT CTCGGCGATAGGTAAATTATAACAATTACAGACGACAATTTGTATTTTGTGTGTTAACAAATAGGTTAACTGAGAGAGCA AAGCAAGACTAGTATTTTGGTTATGAGTAAAGAAAATGGCTAGATGTTCATCATTCATGCCCTTTTCCCCGCAACTCTTT TCATTCTAATAATTGGCTATAGAGTCATTTTGAACTAATGATTGACCTTTTTAATGTATAATTTCTGTAGGGTATCATAT AGAGACGGTGTTGGAGCGGTTTCACAGCAACTTTATACTGCTCTTACGAGACTACAGATGGGTCTTGCGGAGGATGAGAT GAACTGGACTGTTGAACTGAGATAAGAACACCAAGAGTAGCTTGGAGTGCATATTTTGCTGAATACTCACTGAATGTCCA AGCTGTAGAAGTTGTTTCTAGAATTTTGCTTTCATATGTATGAGCTGCTGTAGATAGTTACTATGGTCTGTGAATTGCTG TTGAATGACTAGCAATCACGAACAATCCTATGTTTATTTAATTTTCTTGCCATCTGGGGAAGTCATTATCAGTGAATTAG TTAACCTTTTTTGGTTAAAAAATAGACAAATTCTAGATGCTGCAATTGTGTACTCAAGGATTGGATGAGGGTTTTTCATT ATTTTTGTCCTTTGAGGTCCTAAACATGCTTTTCATTAAGGATATCTATGTCATTCCACAAACATACCATTTTCTTTTCT TTCACTTTTCTTACGTACGAAATGACCTTAAAAACCATCTCACTTTCTCTTCTTTTTTCTTTCTTCTCTCTTTCTTCCTA CTTTTCTATCAACAATGTGGATAGAATAGTGAAGTCCCAAAGCATGCTTTTTCATTTGTGAATCTGATATCAGAATTTGT CTCATATGCCTTCTTTTTGACCTCTGTGCTAGGTCTTCCGTTCTCATTTTTACAATTTCTAACTCCACAAAAGCATCAAA CCGCGTCTCGGACCCGTGACAACTTTTTTGTTGGGGAAAAG
CDS sequence (LotjaGi2g1v0412400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTCCAGCGCCGTCCATGCAGCCACCATTCGACTCACTCACCCGATCTCTTCATCACGCCCTTTTCTCTCCCACCC ATTCAAACCCTCCAATCTCAATCTCAATCTCAATCTCAATCTCAAGCTTCAACACAAGTTTCCTCTCGCTTCTCACAATC CCAGTCTTCTCCAACCACTTTCCGCCACTCTTTCTGATGCCCACAGTGAAACTGAAAACGTGGAGTTAGCGGACTTAGAT TGGGACAATCTCGGATTCGGACTTCAAACTACTGATTACATGTATGTCATGAAGTGCCCGCATGGTGCAGAGGGAGTTTT CTCCAAGGGTGAACTCAAGCGCTTTGGGAACATTGAATTGAACCCCTCCGCCGGAGTTTTGAACTATGGCCAGGGGTTAT TTGAGGGCTTGAAAGCCTACCGGAAACATGATGGCAATATACTCCTCTTCCGTCCACAAGAAAATGCCTTGCGGATGAGG ATGGGTGCGGAGCGGATGTGCATGCCTTCACCTACCGTGGAGCAGTTTGTGGAAGCTGTGAAGGAGACTGTTTTAGCAAA TAAACGTTGGGTTCCCCCTCCAGGTAAAGGCTCCTTGTATATTAGACCATTGCTAATGGGAAGTGGACCTGTACTTGGTC TTGCACCTGCTCCGGAGTACACCTTTCTAATATATGTTTCACCTGTTGGGAACTACTTTAAGGAAGGTTTGGCTCCAATC AACTTGATTGTGGAGAATGAACTACATCGGGCAACTCCTGGTGGCACTGGAGGTGTGAAGACCATTGGCAACTATGCTGC GGTTCTGAAGGCACAGTCTGCTGCAAAAGCTAGAGGCTACTCTGATGTTTTATATCTTGACTGTGTGCACAAAAAATATT TGGAGGAGGTTTCTTCCTGTAATATTTTTGTTGTTAAGGGTAACGTCATTTCAACTCCTGCTGTTAAAGGAACTATCCTA CCTGGCATTACTCGAAAAAGTATAATTGATGTTGGTCGAAGCCAAGGGTTCCAGGTTGAGGAGCGACTAGTGTCAGTGGA TGAATTGCTAGATGCTGATGAGGTTTTCTGCACGGGAACAGCTGTGGTTGTATCACCTGTTGGCAGTGTCACTTATCTCG GCGATAGGGTATCATATAGAGACGGTGTTGGAGCGGTTTCACAGCAACTTTATACTGCTCTTACGAGACTACAGATGGGT CTTGCGGAGGATGAGATGAACTGGACTGTTGAACTGAGATAA
Protein sequence (LotjaGi2g1v0412400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESSAVHAATIRLTHPISSSRPFLSHPFKPSNLNLNLNLNLKLQHKFPLASHNPSLLQPLSATLSDAHSETENVELADLD WDNLGFGLQTTDYMYVMKCPHGAEGVFSKGELKRFGNIELNPSAGVLNYGQGLFEGLKAYRKHDGNILLFRPQENALRMR MGAERMCMPSPTVEQFVEAVKETVLANKRWVPPPGKGSLYIRPLLMGSGPVLGLAPAPEYTFLIYVSPVGNYFKEGLAPI NLIVENELHRATPGGTGGVKTIGNYAAVLKAQSAAKARGYSDVLYLDCVHKKYLEEVSSCNIFVVKGNVISTPAVKGTIL PGITRKSIIDVGRSQGFQVEERLVSVDELLDADEVFCTGTAVVVSPVGSVTYLGDRVSYRDGVGAVSQQLYTALTRLQMG LAEDEMNWTVELR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 37 | 413 | 377 | 3.5E-215 | – | |
| PANTHER | 37 | 413 | 377 | 3.5E-215 | – | |
| Gene3D | 58 | 238 | 181 | 9.4E-65 | ||
| PIRSF | 59 | 413 | 355 | 8.3E-120 | ||
| SUPERFAMILY | 75 | 409 | 335 | 3.53E-104 | ||
| TIGRFAM | 108 | 412 | 305 | 8.3E-103 | ||
| CDD | 119 | 400 | 282 | 5.49162E-133 | ||
| Pfam | 132 | 370 | 239 | 2.3E-39 | ||
| Gene3D | 239 | 412 | 174 | 8.3E-57 | ||
| ProSitePatterns | 296 | 325 | 30 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Branched-chain-amino-acid transaminase activity | Catalysis of the reaction: a branched-chain amino acid + 2-oxoglutarate = L-glutamate + a 2-oxocarboxylate derived from the branched-chain amino acid. | ||
| Biological process | Branched-chain amino acid metabolic process | The chemical reactions and pathways involving amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine. |
Expression pattern of LotjaGi2g1v0412400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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