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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0429800 |
| Transcript ID | LotjaGi2g1v0429800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WD-repeat protein, putative; TAIR: AT4G22910.1 FIZZY-related 2; Swiss-Prot: sp|Q8L3Z8|FZR2_ARATH Protein FIZZY-RELATED 2; TrEMBL-Plants: tr|A0A024FRG3|A0A024FRG3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0429800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:92676924..92683783) extracted from Lotus japonicus Gifu genome v1.2.
CAGAACCTTATTTTCCCGGGAAAATTGTGAAGAGCTTTCAATTCTTTTCCATTCACCCAAACAACAAGAAAAGGGTTTTC GATATGGACAATTCATCATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAGTCACAGGCTCAGCAACA GCAGCATGATCATGTGGATCGCTTGATAAACGCCAATGGATTATACAAATCACCTTCTAGAACAATCTGCTCCGACAGGT TCATCCCATGCAGATCTTCTTCCAAATTCGCGCTGTTTGAGTTATCATCTCCGCCGCCGTCATCAGATTCCAGCAGCGCC GCCTACAACAACCTCTTGCGGACGGCGTTGTTCGGCCCCGATGCTCCCATCACCCCCGACAAACGAACCCCTAATATTTT CCGTTACAAGACGGAGACTCGCCACTCCGTACACTCTCTATCTCCGTTCGATGACCCCATGGGCATGGTTTCTTCCTCTG AGGCCAATCATGCCCCTGTAGTGGTTAAGCCCCCTCGTAAGGTTCCTCCTTCACCTTCTAAGGTTTGTGCCTTTTTCCCC TCTCCTTCAATTTGTTGATTTTTGTGGAGATTATTGTAATTGCAACGTTGTGGGTGACTCTGTATGCTAGATTCTGGATG CTCCTGCACTGCAAGACGATTTTTATCTGAATCTTGTGGACTGGTCTTCCCACAATGTGTTGGCTGTGGCTCTGGGTAAC TCTGCTTATTTGTGGAATGCTAGCACCAGCAAGGTGAGCCTGTGTTGTGAGCTTTCGATCTTCACAGTGAAAATAGTTAT ACCCTTTTGCGTGTATGATTTGGGTTGGGGGTGGGGATAATCTATTTCACTACTCTTGCTTTTATCTAGATGGCAATCAG CTAGGTTAATTGAAGATTTCTTCTATTGTGCGATGTGCTAACATTACATTGGTGTAGGTAACTACATTATGCGACTTGGG GATTGACGACCTAGTTTGTTCGGTTGGCTGGTCTCAGCGTGGTACACACCTTGCTGTTGGAACTAGCACCGGTAAAGTGC AGGTGAGAGTTTATGTTCCCATGCAATTTTAGCACTCATCATGCAGTTTTCGGATTATTCAACATGGATACTTGAAAAAT GAAATTAAATCCTTATGAATGAAATGTATCTTAAGATAATGTACCATGGTTTTAAATTGCGGTTGCGGTTGTGGTCGCAG CAACAGCGATTGCAAATACTGTGGCTCTTGTGATTGTGTTCATTGTAATTGCAGTGTGTTGTGGCTACAACTGTGATATT TCAGCTGTATCAAGTGATTTGGTCCGCAATTTTGAAACTATCATATGTTTATGTCCCTTCATGAGAGTTGACCAGCCGAA ATGTGGGAAGTAACGGTTGATTTAATATTTTATTATCATAAACGAACAATGTTCCCTCCAATTTTGAGACTATCGTATGT TTATCTCCCGTCATGAGAATTGACCAGCCGACATGTGGGAAGCAACGGTTGATTTAATATTTTATTATCATAAACGAATA ATTCTAGGGATTGGATAAGATGATTGATCACCAGTTTAACCCCCAGAAAACTGTATTAGAGTAAATATATCTTGTCCCTT GTTTCCCCCCTTCTTACAAGTTGTGTTATAATTTGGCCAATTAATTAAGGGGTTATGATTCCTTCTGGTGACTCATTGTT TGCCTTCTCCTCATTTGTCTGACGAGCCGAGCTAGATATTGTCTCAACCCCCCTCATTCGTCCATTGGCGGACTTATCCT TGGTTTTAACTCTACCAGCGACCAATCTTCCCTATACCGATCTAGGCGAAAATTATTCGGCATGTACACAGCCCGTTATT TATAAGGTTATTTTTTGAACATATTTATTAGGTTATTAATGTATCATTAGTTGTGCAATACTTTGGCTAAATTATTAAGG GCTTGTGATTCCTTCTGTTGACTCATTGTTTGCCTTCTCCCCTTCATTCATTCGTTGAGTTGAGCTAGATAAGGTCTCGA CCCCCCTCATTCTTCCATGAGCCGACCTAGCAATCTGTTGGTTTAGCTTGAAGCATGAAAAATGCACAACCCTTACTATC TTGTGCCACTATTCAGCTTTAATTAAATGGGGTTGACAAGGATTAAACTCTAGACAACTTGATCATAGAGGCTCTGATAT GTGAAAGTATAAGTTGTTAGGTAAAGCCAGATGAGTAGTTTTACATTACATTTACTTCTCTAACAAAATCGATACCCCAT GTGCCCCCAACTTGTATTAGAGTAGAGTAGGCATCTAGAACTTTACTCAAGATTTTTTTTTTTTCATTGCATTCTTTGAA CTTGCTAAGTTCTCTTCAACATTTCTTTCACAAACATTAATGTCTAAATGTTGCTAACCAGCATGATTTGACCCATGTAA TTATTCTCCATGTAGATTTGGGATGCATCTCAATGCAAGTTGATAAGAACTATGGAGGGTCATCATTTACGTGTTGGGGC CCTGGCCTGGAGTTCATCTATTTTGTCTTCTGGTAGCAGAGATAAAAACATTTATCAACGAGATATACGTGCACAGGAAG ATTTTGTCAGTAAACTGTCTGCACACAAGTCAGAGGTTAGGCTTGTTTTTATTTGCTCCTGCCTTATCTGGACAAAACCA ATTTGCCACCTACTGCATATGGAATTCACTCATTTGAGCATTACTTATTTATTTTTCCCCTTTTTGTTTCTTCAAAGGTT TGTGGACTGAAGTGGTCTTATGATAACCGTGAGTTAGCATCTGGAGGGAATGACAACAGAGTATGCAATCGCAAACTAAA TCATCCTTATGAACTACTCCATTGTACCGTTCCTCATTTACTTCTCGGCGTTGGTAGCAAATAATTTATTTTGTATGTTT GCAGTTGCTTGTTTGGAATCAACATTCAACTATGCCTGTCCTGAAGTACTTAGAGCATACAGCAGCTGTTAAAGCCATTG CTTGGTCTCCTCATGTTCATGGACTTCTTGCGTCAGGTGGAGGAACTGCAGACCGATGCATTCGTTTCTGGAATACCACC ACAAATTCACACTTAAGTTGCATGGACACTGGAAGTCAGGTATTTTCTTTGGTTTTCATTTTTTAGTTTAATACAAGTCT GGTTGTTGGGTGGCACTATGTGAGAGGTTTTTTTTCCTTCTAGTTGGTATAAAATTCACGAGCACTGTTAAAAGATAATT CGGGTAACTCATATGAAGTATGAAAAAACAATAAACTGCCATGCCATCCAAACCTGACTCCATGGAAAGTGGGATTAACA AATCATCACACTTGAGACAAATAATTCCAAATAGAGAAATGATAAAAAGTTAAAAAGGTAAAGGATCAATAACTTAATAC AGCAATAATTAACCTGCTGAATTGAAGACATGCTTCTCTTTAGTGGAATCTTTGAGGATCTTGTTCATAATTGACATTTC CTTACAATTATGCATTACTGTTTGCTCTTTTTTTGCCTCAGAAGAACAGCAGAGTAGGTAATAAATTGAGTCATGGCAAT TGAGTTATCTGCATTTTTCGTCCATACTTAGGGTGTATTTGTGAGTTGAGTTTTGGAGGGGAGGGAAGGGAAGGGGGAGG CTTATGAGAAGCCCTCCTCTTCTTTAGTTGTTTTGTGAAGTTCCCCCAAATTGGGGGGTTTAGATGAATTTAGAACTTGC AAACAAGTGAATGGCTTACCCCCCTTCCCCTTCCCTCCTCCAAACTCACAAGCAAAGCCTTAGTAGTTATAGGAAACTGG AACACTTACTATAAAATCTTTCCAGCTCTAATGTTAGGTGTCACACACTGTTTGTTGGAATCAAGTGTTAGTGTTAGAGT CAAGTCCCATATCGGAGAAGCCAAGGTAAGAGGGAGAGTTTATAAGGAGATGGACCCATAAACCTAATGCCTTAAGGTTT TGGGTTAAGATGTGGTGTCCAAGATTTCCTTGGTGTTTCCCCTCGACCTTGCCCCATGGGTCCTCGTCGTGACTCTCCCC AACAAGTGGTATCGATGGTTGGTGTAGCCATGGTTACGCTCCTTGTGTCGAAAGTCTTCCTAGCAGTGTGGCTAGGCGGC GAGTTCCGTTGGCAGCGAACGACGGTGCAAGGTGGATAGCTTCCGCAGATGGGATCACCATGGGTGATGTGGTTGAGGGA TTCACACTTGAGGGGGAGATTGTTGGAATCAAGTGTTGGAGTCAAGTCCCACATCGGAGAAGTCAAGGTGAGAGGGAGAG TTTATAAGAGATGTGACCCATAAACCTAATGCCTTAAGGTTTTGGGTTAAGATGTGGCGTCGAGATCTCTTGGTGTCTTG CTCCTCGGCCCATGGGCTCCTTTGTCTCCCCCAACAAGTGGTATCAGAGCCGATGGTTCGTGGGACCATGACGGCTCCTT GTGTCGAAAGTCCTCCTAGCAGTGTGGCTAGGCAGCGGGTTCCGTTGGCAGCGAACGACGGTGCAAGGGTGGATAGCTTC CGCAGACGGGAGGAGCATGAGTGATGTGGTTGAAGGACTCACACTTGAGGGGGAGATTGTTGGAAAGTGTTAGACTCAAG TCCCACATCGGAGAAGCCAAGGTAAGAGGGAGAGTTTATAAGGAGATGGACCCATAAACCTAATGCCTTAAGGTTTTGGG TTAAGATGTGGTGTCCAAGATCTCCTTGGTGTTTCCCCTCGACCTTGCCCCATGGGTCCTCGTCGTGACTCTCCCCAACA CTGTTCTGCAAAATAATAATAATAATCATAATAATAGTTTCTGCCTTATGGCATTTCTCGTGTAAAATAGGGGAATTTGA CAGTTGTCACTCCTAATAGCATTTTAGTCTCAATGCATTTTTCGTTCTTCCCCACTACTTGGGTTAGGGAAGGGGAAATG AAGGCATGTTACGGGAAACCTCAACACCCCTCCCCCAGGCCCTTCCAGGGAAAAAAATCGGCTTCAGAATCAAACTTGTG AGTTGTGATGCTATTAGGTCATAGTAAGAGAGTTAGTTAATAATTAGCTGGACTAAGATTGAAGATACTAGTCATGCTGC TACAAATAAGCGGAAGGTTGGGAGCTATGAGAGAACTGAGGTGTAGAGTGCAGACACTTAAAGCTCTCTAGTGCTCTATC TGTAATCAGGGTAGATTTTCATTGTTAATTCTAATAAAATAACAGGTTCCTAACAAGTGACACTGGGTGGTCGATGACCC CATTGGAAATTCAATCCATGTTGTGCATCGGAAATTCTTAGGGCTTGTTTGATTCCCTTTCATATCCACAGATTTTAGAT TATTGAAGCTTCTTTTTCATTTTTATGATTTGTTTTCAGAATTCATGGCATTTCTCATCACATTTTGACTTGTATAAAAT GGTGTCTTCCTCCCACTTCTTTTTCTCTTTTGTATAACAAATATAATAATGTTCATCCTTTACATATGACAGGTCTGTAA TCTTATCTGGTCCAAAAATGTCAATGAACTGGTAAGCACACATGGCTACTCCCAGAACCAGATAAACATTTGGAAATACC CTGCCATGTCAAAGGTACACGTTGTATCTGCTGGGTGCTTGTGTGTGTATTTCTATAACATCTTCTACCATTTACTTATG ATCCTTTTTATGCAGGTAGCAACTCTTACGGGTCATTCTTATAGAGTTCTTTATCTTTCCATCTCTCCTGATGGGCAGGT ATTTCAGTTATGCTTCCTTTCACTCATTCTTGTCAAATAGCTGATCACCAAAATGATTTCCTATTCTGTTAATAGCATGT TTTGAAACCAATAAGTTTCCATGTTTAACTACAATCGATTTTGACATAAAGCTTGAAATGAAAAGCTGCTCTTCTTAGCT TATCCAAACATGCATTAAGTACAATATTTTTCTGATTGTGATGACTTCTTCTACCTACTGTTGTAGACTATTGTCACTGG AGCTGGAGATGAAACTCTTAGGTTTTGGAATGTATTCCCTTCCCAGAAATCTCAGGTAATTAATTATTCATTATGGAGAA TAAAGTGTATTATTCATAGGCCCTACTCGTCTCTTATTTGATTGACCGTGGCTTCATGATTCAAGTTTCATTCATACCCA ACTGTATCGCTGTTCTCTTAGATATCTATGCAGATGCATGAAATTCACCTTAATGCATTTTTCATAAAAGTGCTGCAGGC TGCACCACCATTTTCTTTGATTAGAATTTTCAGTTACTCTTCATTCTCGATAGAAATGGGTAGTGCAACTGCGACATTCG TTAGTCTCATGTTTGATGTCATTCCATATCATGGATTAAGTAAAAATATGATATGTGGTTGTCATTATTGATCCTCTGAC TCTTTTTACTCAAGATTGATATGTTGTTGTGATTATTTATGTAGAATACTGAAAGTGGAATTGGAGCATCATCTCTTGGA AGAACTATAATTAGATGACACTCCTTGCATATTTTCTACTCAAGTCATGTGACATGCTCCAAGCTTCGGATTTTTTGGCG GAGAAAATTTCAGAGCAGCAAGAACACCGTGGTGAATATTTTTGCATTCACCGTGGTATATAGCTAATGGTGGAAATCCA TGCTATATGTGTGGATAGTTCCATATAGAGGGAAAAAGTAATTTTATTGGCATCCTAGATCTATTTATGCATGTTAAGGG AGTAGTAGGCCAACTTTGTTTTTCTGCCTTTTTTTTTTTTGTTCTTTTTAGTAGTGCTTGCTCCCTTGCATTGTACATTG TCTTTAAAAGACATAATATATTAGATTATTAGTGTTAATATATAATCTCTTCTTGATATTTATATTCTAGCACATGACTG AAAATATATGCATAAGCTGTCAACAAAATTGGCTTTTGCCAACCGACCCAGATGCGGTTC
CDS sequence (LotjaGi2g1v0429800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACAATTCATCATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAGTCACAGGCTCAGCAACAGCA GCATGATCATGTGGATCGCTTGATAAACGCCAATGGATTATACAAATCACCTTCTAGAACAATCTGCTCCGACAGGTTCA TCCCATGCAGATCTTCTTCCAAATTCGCGCTGTTTGAGTTATCATCTCCGCCGCCGTCATCAGATTCCAGCAGCGCCGCC TACAACAACCTCTTGCGGACGGCGTTGTTCGGCCCCGATGCTCCCATCACCCCCGACAAACGAACCCCTAATATTTTCCG TTACAAGACGGAGACTCGCCACTCCGTACACTCTCTATCTCCGTTCGATGACCCCATGGGCATGGTTTCTTCCTCTGAGG CCAATCATGCCCCTGTAGTGGTTAAGCCCCCTCGTAAGGTTCCTCCTTCACCTTCTAAGATTCTGGATGCTCCTGCACTG CAAGACGATTTTTATCTGAATCTTGTGGACTGGTCTTCCCACAATGTGTTGGCTGTGGCTCTGGGTAACTCTGCTTATTT GTGGAATGCTAGCACCAGCAAGGTAACTACATTATGCGACTTGGGGATTGACGACCTAGTTTGTTCGGTTGGCTGGTCTC AGCGTGGTACACACCTTGCTGTTGGAACTAGCACCGGTAAAGTGCAGATTTGGGATGCATCTCAATGCAAGTTGATAAGA ACTATGGAGGGTCATCATTTACGTGTTGGGGCCCTGGCCTGGAGTTCATCTATTTTGTCTTCTGGTAGCAGAGATAAAAA CATTTATCAACGAGATATACGTGCACAGGAAGATTTTGTCAGTAAACTGTCTGCACACAAGTCAGAGGTTTGTGGACTGA AGTGGTCTTATGATAACCGTGAGTTAGCATCTGGAGGGAATGACAACAGATTGCTTGTTTGGAATCAACATTCAACTATG CCTGTCCTGAAGTACTTAGAGCATACAGCAGCTGTTAAAGCCATTGCTTGGTCTCCTCATGTTCATGGACTTCTTGCGTC AGGTGGAGGAACTGCAGACCGATGCATTCGTTTCTGGAATACCACCACAAATTCACACTTAAGTTGCATGGACACTGGAA GTCAGGTCTGTAATCTTATCTGGTCCAAAAATGTCAATGAACTGGTAAGCACACATGGCTACTCCCAGAACCAGATAAAC ATTTGGAAATACCCTGCCATGTCAAAGGTAGCAACTCTTACGGGTCATTCTTATAGAGTTCTTTATCTTTCCATCTCTCC TGATGGGCAGACTATTGTCACTGGAGCTGGAGATGAAACTCTTAGGTTTTGGAATGTATTCCCTTCCCAGAAATCTCAGA ATACTGAAAGTGGAATTGGAGCATCATCTCTTGGAAGAACTATAATTAGATGA
Protein sequence (LotjaGi2g1v0429800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDNSSSSSSSSSSSSSSSSQSQAQQQQHDHVDRLINANGLYKSPSRTICSDRFIPCRSSSKFALFELSSPPPSSDSSSAA YNNLLRTALFGPDAPITPDKRTPNIFRYKTETRHSVHSLSPFDDPMGMVSSSEANHAPVVVKPPRKVPPSPSKILDAPAL QDDFYLNLVDWSSHNVLAVALGNSAYLWNASTSKVTTLCDLGIDDLVCSVGWSQRGTHLAVGTSTGKVQIWDASQCKLIR TMEGHHLRVGALAWSSSILSSGSRDKNIYQRDIRAQEDFVSKLSAHKSEVCGLKWSYDNRELASGGNDNRLLVWNQHSTM PVLKYLEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNSHLSCMDTGSQVCNLIWSKNVNELVSTHGYSQNQIN IWKYPAMSKVATLTGHSYRVLYLSISPDGQTIVTGAGDETLRFWNVFPSQKSQNTESGIGASSLGRTIIR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 23 | 23 | - | – | |
| PANTHER | 7 | 470 | 464 | 3.9E-223 | – | |
| PANTHER | 7 | 470 | 464 | 3.9E-223 | ||
| SUPERFAMILY | 125 | 445 | 321 | 1.83E-57 | ||
| Gene3D | 142 | 449 | 308 | 1.6E-117 | ||
| ProSiteProfiles | 159 | 454 | 296 | 35.066 | ||
| SMART | 191 | 232 | 42 | 0.057 | ||
| Pfam | 193 | 256 | 64 | 5.1E-6 | ||
| ProSiteProfiles | 207 | 241 | 35 | 8.67 | ||
| SMART | 235 | 272 | 38 | 0.034 | ||
| SMART | 276 | 315 | 40 | 2.0E-6 | ||
| Pfam | 280 | 315 | 36 | 7.0E-5 | ||
| ProSiteProfiles | 283 | 315 | 33 | 12.681 | ||
| SMART | 318 | 360 | 43 | 0.011 | ||
| Pfam | 326 | 360 | 35 | 0.075 | ||
| ProSitePatterns | 347 | 361 | 15 | - | ||
| SMART | 406 | 445 | 40 | 2.1E-7 | ||
| Pfam | 409 | 445 | 37 | 5.3E-5 | ||
| ProSiteProfiles | 413 | 454 | 42 | 14.485 | ||
| ProSitePatterns | 432 | 446 | 15 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Anaphase-promoting complex binding | Interacting selectively and non-covalently with an anaphase-promoting complex. A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. | ||
| Molecular function | Ubiquitin-protein transferase activator activity | Increases the activity of a ubiquitin-protein transferase, an enzyme that catalyzes the covalent attachment of ubiquitin to lysine in a substrate protein. | ||
| Biological process | Positive regulation of ubiquitin protein ligase activity | Any process that activates or increases the frequency, rate or extent of ubiquitin protein ligase activity. |
Expression pattern of LotjaGi2g1v0429800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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