Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi2g1v0442900 |
Transcript ID | LotjaGi2g1v0442900.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Phosphatidylinositol 4-kinase gamma 4; TAIR: AT1G64460.1 phosphatidylinositol 4-kinase gamma-like protein; Swiss-Prot: sp|Q9SGW8|P4KG2_ARATH Phosphatidylinositol 4-kinase gamma 2; TrEMBL-Plants: tr|I1JAE9|I1JAE9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0442900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93865905..93869014) extracted from Lotus japonicus Gifu genome v1.2.
AGAATCCACTCTCACATAATATTATATTTATTATATGATACAAAAAAAAACAACAACCCATATCTCCCTCGGTACATCAC ATCATTTTTTCATCTATTCTTCGTTTTGTTTTCCTTTCTACAAATTTTGTTTCCGGGGTCTTTCGATCACTTTTGATCGA AAGAAAGCCGATCGAAAGACCCTCTAGTGTCCGTCATTAGCAGTGACAGATCCAGAAACTTTATATTATGTAGGCCTACA TCAACCTGCATACATACGTACATGGTTGCATAGGCCAGGACTTAATTTAGAAAGATAGAAAACACAAAAAAAAAACATTG TTGTTCAGAATTTGAAACATGTCAGTGGCGGATGTTGTTGCTGTGAGTCCGATTTGCAACGAATCGGCGGCACATTGGCA CGAGCGGATAGGCCACTGCTCCGGCGAATTAATCCTGATATACCTCACCGTCGACGGAGCCGTCACGCCAATGCGTGTGT TGGAGTCTGATTCCATCGCTTCAGTGAAGATGAGGATTCAGAGATCATGCAGAGGGATCGCAGGGAACAACAACAACAGC AACAACAACAAGCACAAGCTGGTTTCCGGTGGCAGGGAGCTAGCTCGGAACAACTCACTCGTCAAGGACTACGGCGTAAC CGCCGGCAATGTTCTCCACCTGGTTCTGCGTCTCTCCGACATGATCTTCATTGTCGTGAGGACCACCTGCGGCGAGGAAT TTGAGTTTCAGATTGACCGGCATAGGAATGTGGGGTACCTTAAGCAAAGGATCAAGAAGGGGAAAGGTTTCATCGATCTT GAGGATCAAGAGCTTTTCTGCGGCGGCGAGAAGCTCGATGACCAGAGGCTCTTCCGTGACATTTGTGAGAGTGATGATGG TGTCATTCATCTGATTGTGAAGAAATCAGCAAAGGTTAAGGCCACATCAGTTCACAAAGATTTGGAGCTTTCAGTTGTGG CAGAGAATCACCAGATAGCAAATTCAAATGGAAATGCCGAACCTGGTGTTGATTTCTTGTTAGAGCCAATTTTTTTGGAC CCTAAGATCAATTTTTTTCCTTTCCTTTGGGACTTGATCAACTCCACTTGCAGTGGTTTGGAGAAAGGTAACCACCCTGT GAGGTCTTCTGAAGGAACAGGTGGGACTTACTTCATGCAAGACTCAGAAGCAATGGAGTATGTTTCAGTTTTTAAGCCCA TGGATGAGGAGCCAATGGCGGTGAACAACCCGAGAGGTTTACCGGTTTCGACCGACGGTGAGGGTTTGAAGAGAGGGACA AAGGTGGGAGAAGGAGCTGTGAGAGAAGTTGCAGCCTATATATTAGATCATCCTAAGGCTGGGCCACGTTTGGAGTCAGG TGAGGCAATAGGCTTTTCTGGTGTTCCTCCTACAGTTATGGTTCAGTGCCTGCATGAAGCTTTTAATCATCCAGATGGGT ATGAGGGCTCAATGAAGGACTCCAAGATGGGGTCATTGCAGATGTTCATGAATAATGATGGAAACTGTGAGGACATTGGG CCAGGGGCTTTTTCTGTGGAGGAGGTGCATAAGATCACTGTGCTTGATATCAGATTGGCTAATGCAGACAGACATGCTGG AAATATATTGTTCAAGAAAGAGGATGGTGGCAAGACTGTGCTCATTCCAATTGATCATGGATATTGTTTACCTGAGAAAG TAAGCATTTGTCACTCTTCTCTTCTTTCTTTTCCTCACAATTTCATTTCCCCTGCATTATCTTCTTGAATATGTGCTTTT GTGTTGTTTGTGTTTGGTGTCAATGACTCACTAACTACATGATTTTAAATTCAAAATTAATTATGAGGAGAAGCTTTTGT GAGTAGTTTTTGGACGGCGGAATTGATTCTAAGGAAAGATAAGCTAATCCAAACATACTATGAGTATATTGGAATGTTTA AGAAAACTGTGTGTGAAATGCTGTGAGTATGTTTGGATCAAGTTTCTCTTTCCTATGAAAGATAAGTTAGATACAGAAGT TTCTCTTCAAAATTGATTCTAACTTTAGAATTAATTGTAGAAAGTTTTCCCAACATGCACTTAGTACATTGATAGAGTCT GATAAAACATATGGCAAAGATGTTATTTGCATATCTGATGAGTCCATAAAAACTTGTTAAAGGTGGATCAAAATGTGCTG AATTTTATGTCTTTGGATGTTGTATTGATAAACAAAAGTCTTGTGCTGCTTAAGTTAAGTTTCTTATTTATTTTATGAAT GTGTTGACTCAAATGGTTATTCTCCCTCTTTGCAGTTTGAAGATTGCACATTTGATTGGCTTTACTGGCCCCAAGCAACC AAGCCATACTCTCCAGATACAGTTAATTACATTAATTCTCTGGATGCTGAAAATGACATAGAACTCATGAAGTATTATGG GTGGGATGTTCCAGTTGAGATTGCGCGAACACTCCGCATCTCCACAATGTTATTGAAGAAAGGTGTTGAGAGAGGTCTCA CTCCCTATGCCATTGGAAGCATTATGTGCAGGGTAGACATGAATAAGGAATCTGTAATTGAGGAGATTATCAATGAAGCT CAGGAGTCCTTGCTACCTGGCATGGGGGAAACTGATTTTCTGGAAGTTGTATCCCAGATCATGGATTCCCGCCTCGATGA TGTTTCCAAATAGGCTTTCAGCACGTTTGGATTAGCTTCTCTTTCATCAGAATCAATTCTAGAAGAGTTTCCAAATGTGC AACTTTTCTGATTAATAGGTATACTATACTATATATATATATATATATTTGCATGTATTGAGTGAATTTGGTCCATATTT GGATGGACTTACAAAATGGTGATGGCTAGAGGTGTTGTGGACATAATCATATAGGTATGAAGCGATTTTCCTATCTCTCA CCCAATCACTTGTTTTCAGGATTGTATTGCCATGTTGTTGAACAGATGTACTGAATAAGATGTACTGTACTGAGATTTGG AGTATCTTAGGGTTGTATGAGAGGGTTGACACAGGAGCTGGACATGTCTCGTGTACATAAAATTTAAAAGACATTTTGCT CCTTACCCTGCATCCTTGTTAAGGAGATGTACCACGCTATCATGAAATATCAATGTTCCTTATTATTTTG
CDS sequence (LotjaGi2g1v0442900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGTGGCGGATGTTGTTGCTGTGAGTCCGATTTGCAACGAATCGGCGGCACATTGGCACGAGCGGATAGGCCACTG CTCCGGCGAATTAATCCTGATATACCTCACCGTCGACGGAGCCGTCACGCCAATGCGTGTGTTGGAGTCTGATTCCATCG CTTCAGTGAAGATGAGGATTCAGAGATCATGCAGAGGGATCGCAGGGAACAACAACAACAGCAACAACAACAAGCACAAG CTGGTTTCCGGTGGCAGGGAGCTAGCTCGGAACAACTCACTCGTCAAGGACTACGGCGTAACCGCCGGCAATGTTCTCCA CCTGGTTCTGCGTCTCTCCGACATGATCTTCATTGTCGTGAGGACCACCTGCGGCGAGGAATTTGAGTTTCAGATTGACC GGCATAGGAATGTGGGGTACCTTAAGCAAAGGATCAAGAAGGGGAAAGGTTTCATCGATCTTGAGGATCAAGAGCTTTTC TGCGGCGGCGAGAAGCTCGATGACCAGAGGCTCTTCCGTGACATTTGTGAGAGTGATGATGGTGTCATTCATCTGATTGT GAAGAAATCAGCAAAGGTTAAGGCCACATCAGTTCACAAAGATTTGGAGCTTTCAGTTGTGGCAGAGAATCACCAGATAG CAAATTCAAATGGAAATGCCGAACCTGGTGTTGATTTCTTGTTAGAGCCAATTTTTTTGGACCCTAAGATCAATTTTTTT CCTTTCCTTTGGGACTTGATCAACTCCACTTGCAGTGGTTTGGAGAAAGGTAACCACCCTGTGAGGTCTTCTGAAGGAAC AGGTGGGACTTACTTCATGCAAGACTCAGAAGCAATGGAGTATGTTTCAGTTTTTAAGCCCATGGATGAGGAGCCAATGG CGGTGAACAACCCGAGAGGTTTACCGGTTTCGACCGACGGTGAGGGTTTGAAGAGAGGGACAAAGGTGGGAGAAGGAGCT GTGAGAGAAGTTGCAGCCTATATATTAGATCATCCTAAGGCTGGGCCACGTTTGGAGTCAGGTGAGGCAATAGGCTTTTC TGGTGTTCCTCCTACAGTTATGGTTCAGTGCCTGCATGAAGCTTTTAATCATCCAGATGGGTATGAGGGCTCAATGAAGG ACTCCAAGATGGGGTCATTGCAGATGTTCATGAATAATGATGGAAACTGTGAGGACATTGGGCCAGGGGCTTTTTCTGTG GAGGAGGTGCATAAGATCACTGTGCTTGATATCAGATTGGCTAATGCAGACAGACATGCTGGAAATATATTGTTCAAGAA AGAGGATGGTGGCAAGACTGTGCTCATTCCAATTGATCATGGATATTGTTTACCTGAGAAATTTGAAGATTGCACATTTG ATTGGCTTTACTGGCCCCAAGCAACCAAGCCATACTCTCCAGATACAGTTAATTACATTAATTCTCTGGATGCTGAAAAT GACATAGAACTCATGAAGTATTATGGGTGGGATGTTCCAGTTGAGATTGCGCGAACACTCCGCATCTCCACAATGTTATT GAAGAAAGGTGTTGAGAGAGGTCTCACTCCCTATGCCATTGGAAGCATTATGTGCAGGGTAGACATGAATAAGGAATCTG TAATTGAGGAGATTATCAATGAAGCTCAGGAGTCCTTGCTACCTGGCATGGGGGAAACTGATTTTCTGGAAGTTGTATCC CAGATCATGGATTCCCGCCTCGATGATGTTTCCAAATAG
Protein sequence (LotjaGi2g1v0442900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSVADVVAVSPICNESAAHWHERIGHCSGELILIYLTVDGAVTPMRVLESDSIASVKMRIQRSCRGIAGNNNNSNNNKHK LVSGGRELARNNSLVKDYGVTAGNVLHLVLRLSDMIFIVVRTTCGEEFEFQIDRHRNVGYLKQRIKKGKGFIDLEDQELF CGGEKLDDQRLFRDICESDDGVIHLIVKKSAKVKATSVHKDLELSVVAENHQIANSNGNAEPGVDFLLEPIFLDPKINFF PFLWDLINSTCSGLEKGNHPVRSSEGTGGTYFMQDSEAMEYVSVFKPMDEEPMAVNNPRGLPVSTDGEGLKRGTKVGEGA VREVAAYILDHPKAGPRLESGEAIGFSGVPPTVMVQCLHEAFNHPDGYEGSMKDSKMGSLQMFMNNDGNCEDIGPGAFSV EEVHKITVLDIRLANADRHAGNILFKKEDGGKTVLIPIDHGYCLPEKFEDCTFDWLYWPQATKPYSPDTVNYINSLDAEN DIELMKYYGWDVPVEIARTLRISTMLLKKGVERGLTPYAIGSIMCRVDMNKESVIEEIINEAQESLLPGMGETDFLEVVS QIMDSRLDDVSK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 571 | 571 | 0.0 | – | |
PANTHER | 1 | 571 | 571 | 0.0 | – | |
SUPERFAMILY | 29 | 112 | 84 | 7.01E-5 | ||
Gene3D | 32 | 113 | 82 | 9.5E-9 | – | |
SMART | 32 | 111 | 80 | 0.84 | ||
CDD | 33 | 112 | 80 | 1.40194E-16 | – | |
ProSiteProfiles | 34 | 115 | 82 | 10.092 | ||
Pfam | 38 | 112 | 75 | 5.9E-8 | ||
SUPERFAMILY | 83 | 189 | 107 | 1.09E-19 | ||
Gene3D | 114 | 215 | 102 | 4.7E-10 | – | |
SMART | 116 | 188 | 73 | 1.6 | ||
ProSiteProfiles | 116 | 192 | 77 | 12.422 | ||
CDD | 118 | 186 | 69 | 2.84769E-9 | – | |
Pfam | 118 | 189 | 72 | 5.4E-5 | ||
Pfam | 266 | 519 | 254 | 7.2E-53 | ||
SUPERFAMILY | 413 | 570 | 158 | 3.62E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0442900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…