Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi2g1v0457600.1

Overview

Field Value
Gene ID LotjaGi2g1v0457600
Transcript ID LotjaGi2g1v0457600.1
Related isoforms 6
Lotus japonicus genome version Gifu v1.2
Description Pre-mRNA cleavage complex 2 protein Pcf11; TAIR: AT4G04885.1 PCF11P-similar protein 4; Swiss-Prot: sp|Q0WPF2|PCFS4_ARATH Polyadenylation and cleavage factor homolog 4; TrEMBL-Plants: tr|A0A1J7HJ63|A0A1J7HJ63_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0457600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:95119492..95126723) extracted from Lotus japonicus Gifu genome v1.2.

GTCGTGTCCTTAGAGCAGTGGTGGCAACTAGTATATATGTTACCAGAGGATTGAATGATATGATAGAGAGGGTGATAGAT AGTGCATTGCTTTGCAGGGTTTGCACACGCATGTCGAATCACGTTCATACATAGTCGCTACTCCCAAACTACCCATCCAA TTCATACCCACAGCGCCGTCCCATTCAAATTCGATGGTGCGGTGACGGTGCACCACCACCACCACCATGTGACCAAATTC AAAACCCTAACCCTAACTCTCTGGATTGAATTTTCTGATTCCCCAAAATGAGCAGCAATGACATGATGGGGCAGAAGCTT CCCCCTCCGACACTGGTGGATCGATTCAAGGCTCTACTCCGGCGACGCGATGATGACCCTCGCTTTAGGGCTTCCGAAGA GATTGTCCAGATTTACGAGCTCTTGTTGTCTGAACTCACCTGCAATCTCAAGCCCATCATCACCGATCTCACCATCATCG CCGAGCAGCAGAGGGAACACGCTGAGGGCATTGCTGATGCTATTTGCACCAGGATTCTCGAGGTCTGTCTCCGTAGCCGC AGATTTTTTTGTTCATGTTTACCCTTCCCCCCTTTCCACCACCGATCATATGGTTCAATCAAAGCTATTATTTCAATTTT CTTCAGTAGATTCCTCTTCTTTTTATGTTAATTTCCTTCTTTCATCGCGCTTCTGGGTTTCACAAGTCTAGCGATTATTT ACCATTATCTGTTATCGTGATGTAAATTTGGATAAAGCCCTCGTTGTTGCTTCAGAAATGGTTAATAAATGCACACACAG AGCTAACTCTGCTGAAATTGACCACCACCATCACCTTCGTTATTACTACTTTTATCCAACTAAAACACAATCAGTAGCTA CTGGCATTTGAAGAAATTGGAATAGTACCATTTAACATAACGGATAATTGATTGGCACCGCTAATATCTTCCAAATAGTA CAATTTAGACAAACAAGCATTCTACGCATTTGAGCACTTAATCAATTTCAGGAAATGCCAAGGGTGTACACAAGTGAACA CGGACCCACATGCTTATACATACATATTTTTATATTTATAAGATTCAGGCCTGTTATCTGAACTTTGAAGAAAATTGTTA TTGTAGTATTGCTGAAATGTAGACTTTTGCACTCTCCATGTTTTCCATATCCTCACATATCCACCTCTCTCTCTCTTGGT GCGTGTATATTTAAATGGGTTACCTTAAGTTTGAGTATGCTGGTAGTTATGTAATCTTAGGATTTCTAGTCTTACCATGG CTGAAAAGGGAACATTGATTTCAAATAAATGAGAATGTGCAAGGCTGCAGTTGAATGTTAAACTAATTCTTGTATTAGAT TGAATAATTTTGTTTGGGAGTGCTGCCGTAGACTGAATATTATGACTTGCATCATGCTTTAATATATTGTCAATTTTCAA TCCTATTAAAACAAAGCACGCTTTGTTAATATTTTTATAAGAAAGTATGCTTTTCTTATCATTTACATACCAAGTATCTT TTTTGTAAATTAGCTTATCTTTGTCTAAATTAGTGATATCTGAGGCAGAATAATTAAAATTGTTAAATTACGATTCCATT AGTAAATTTCAAGAGTGACTGTTGACAATAATGATGCAGAGACTCTTACTAAGGTATTGTGTCTTGCCTAAACCCTGTGT TAAGGTTGAGTTTTAGAGATTAATTATCACTGGTCTCTCTTCTGAAATGAGTACATTGTAAGATTTTCTTAAAGAATTTG GTAAAAATGAACTGGTATTGAAATATATTATAGTTGTTAAAACAGTTAAACTCAAAATGCTAATCAAAGTCATTATAAGC TGTTGTGTTTGTTGTAATTACGAACTGCATTTTCTTATCTAATATTTCGTTAGTATTTCAATTATTATTTGAGTCGCTGC TGTTTAGGTAGTTCTTCAATTGTTGTAGCTATCCTTTCCAGGTGCATGCAGATCAAAAGCTTCCTTCACTTTATCTTTTG GACAGTATTGTGAAGAATGTTGGCCAGGAATATGTTAAATACTTCTCTTTACGGCTACCTGAAGTAGGTCAACTAGAGTT GTATTCTTTTTTTAATTCATAAAGCATGAAATCATTTTATTCTGTTATTGAAACTTTGTAGTTCTATTGTCTCCAAAGGT TTTCTGTGAGGCATACAGGCAGGTTCAACCTCACTTGCATTCTGCTATGCGTCATCTCTTTGGTACCTGGTCCAAAGTCT TCTCTGCTCCTGTTCTACGTAAGATTGAAGCTCAATTGCAATTTTCACGAGGAGTTAATAACCAACCATCCAATGTCAAT CCCCTCAGGACTTCTGAATCACCTCGACCAACTCATGGGATACATGTTAATCCAAAATACGTAAGACAGATGGAATGCTC TAGTTCAAATATAGATAGTGTAAGCTTTTATTTTTTGTGTAATCTGTCTTCTATACATACTTTGCAGGGAGTAGGCTGCA GCTTGATTACTTGCTGATTTGAAAAGGATATGTTTGGTTTTGATAATTTTTAAATGTGATGTTTTGTGTGTCGCAAATAT TGTTAATTTGTTCAGCTGCTAAGGATCTCTCAGAATTTTTTTCATTGAATCTCCTCTCATTAATGTTCTTTAGTTCCCTT GAAGCAGTTAAAGTTCTGGATGACATATTAGATAAATTCATGTTTCTAATTTGCACTTTGCACTTTGTTCTACAAGAAAA ATGATTCTGCTTATATCTGTTAGTATGCTCCTGCCAATAGAGATCCTTCAAACTATAAGATGCAATCTGACAGAGTGTTT GGTTTCATCCTCACAGGTTGGAGGTGAAAGGTTGGACTCAACAGGGACAGGAGGTAATACAAGCTTTGGCCTCGTAGCTA ACAAAATCCATCAATTTGGGCCTAGTAGGCATGGAAGGTCCTCCTCACCATCAAGAATTGGAATTGATATGCCTTTGTCC ACATATGCGGATGAATATCCCGCTGACAATTCTACTGGCAGGACAATTGAGAGAGAATCTCCTCATCATGCAGTTGATTA TGGAGTAGTTAAAACATTAGGTAGAGAAGAAGAGTTGAGTGAATGGCAGAGAAAGCAGTTTTCTGGTGATAGTCGGAAGA GATTTCAAACTATGACATACAGTCTTAGTAACGGACAACAGCGTCAAAGTCCTAGAGCTCTGATTGATGCATATGGAAGT GACAAAAGTCAAGAAACTTCTAGCAGTAAACCTTTCTTAGTTAAACGGCTTGGTAGAAATGGTATAGACAAGGTTTCGAC AACGTCATGGCAGAATACTGAAGAGGAGGAGTTCGATTGGGAAGATATGAGTCCAACATTAGTAGAACATAATAGAAATA ATGGTTTTCTGCAGTCAACTACTGGTTTCACCACGGAAATGCCAGTTACTGTTGCAGCTAATGCAATTTCTTCTGAGCAA GATACCAGGACGGGTTGGTCTAGTGGGTCTCAGCTTCTTCCGGTTGATGATTCCTCAGTTATAGCCGAAGATGTATTCGC CTCTTCAGCTGTATGTTTCCTGAACTTCTATCTTTTATCCTTTATCTTTCTAATTTATATAACAACCACGGAAACCATTT TCGACTAGGTGGGATCAGCTGCATGGATATGACAACACTATAATAGCAATGCGACTTTTTATCTTTCTACTGTTTAGCTC TTTAATATGATTGGTGATATTGTGTTTTCCCTCAAATGCATGTTTTTGGCATGCCAGTATGTGCTACTTCATGAATCATA TACCATTGGTACTTCAAGATCCAGTCATTATTATCTGGTGATGAGCGTTGCTAATTGCTTTTCATGAGAAATTCGAATCA AATGAAATGTCTTGCTTTTATTCATATTTGCCTGGAGATTGCCTTTGCCTTTGTATTATCTTCACATTGATTCATTAATT TTTCATAGTTAGAGTAAACTAGCAACTTTCAGTCCTTACTCCTTTTCTTTTAAAATTTGCCATGTACTCAGGCATGGGCC GCATGTCTAATGGTTTTGTTTATCATTAACTACGTTAAGATCATTTCTTTTAGTATACTTTAATAGGAAATTGAATTTAC CAATATTTTGCTGATAGATAATGGAATTGAAAATTCATATATTCTCTAGTTCATCTCTTCTAGTATAATTTTATAGGAAA TTGAATTTGACAATATCTTGCTGATAGATAATGTAATTGAAAATTCATATATTCTCTGCAGTATTCTCGTGTACCACTGG GTCAGGTATCTGGATTCCAGAATCCAATAAATCAGAGTCTAGGCTCTGGTCAGCGTAATGATGCTTGGAAGATTTCTAGT CATCCATCTAATTCTACACGACACCCCTTTAATGTTATGGGAGGAGGTAGAAATCTTCTGATGCCTCCTATTGATAACAT TCCCAATACTGATGTAAACTCGTATGGTGCTCGGCTGGCTGCGTCAAGGATGCTTCCTGGTCTCAAGTCCAATGTGGAGG GTGGTCCTCCACCAGTTTTGCCAGCAACTTTTGAAATGAGGCCCTCTGTAAATGTGCATGCTGCTCGTCCTCCCAGCTTA AACCCTGCATTTCAGTTTAAAAACAATGTCAGATTTGAATCAATAAATGCTAATAATAACAGTGCAAATCATGGTCCCAA TAATTCCTTGCTTATGCGTGAGCAGTCATTGTACAATGTTGAGGACAAAGACTTTAGTAAAGGGAACCTATATCAATTGC CTAATCAGCAATCTGGTCTGGTTTCATCTAACCCACAAAACCGAGGACAAGCACCTCAACTACAGTTTTTTCCCTCTCAG GATCCGGCAGCATCACAATTTAGTGGGAGCTCTTTTCAAGGACATGGTGGTGCTAGAAATACACATTTGTCAAATGCGCC ACCAAACATGCCATTCCCTTTACCAGGCCAAAATATGGTGAATAACTCTTTACATTTTCTGGGGGGAGCCTTGCGACCCT TACATCCAGCCCGGCCGCCATTGCTACCTCATCCTAATCATACTCCTCTTGTTTCAAGTCAACGGCCAACTGTTCCATAT TCTAATTTGTTTAGTTCACTCGTCGCCCAAGGTGTAATCTCATTTCCTAATCAGGCTCCTGCACAGGTAACTAAATCTTT TAAGTTTATTTATTTTTCCTTTCTCCTGCCATTGTTGATCTGATTGTGCAAACCAAGTGTAATGAAATTGAGTTACTTGT TTTTAGGATTCTGTTGGAATTGAGTTCAATCTGGATATTCTGAAGGTGCGTCATGAATCTGCAATCAGTGCTTTATATGG TGATCTCCCTAGACAATGTACAACTTGTGGTCTCCGTTTCAAATGCCAAGATGAGCACAGTAATCACATGGATTGGCATG TGACTAAGAACAGGATGTCTAAAAACCGTAAGCAGAAGCCTTCTCGTAAGTGGTTTGTGAGTGAGAGGATGTGGCTTAGT GGTGCAGAGGCATTAGGAACAGAATCAGCTCCAGGTTTTTTGCCAAATGATACGGTTGAGGAAAAGAAAGATGATGAAGA GTTGGCTGTTCCTGCTGATGAGGACCAGAATACATGTGCATTATGTGGAGAACCTTTTGATGAGTTTTACAGTGATGAAA CGGAGGAGTGGATGTATAGAGGAGCTGTGTATCTTAATGCACCCAACGGAACAACAGCAGGTTTGGACAGGTCACAATTA GGCCCCATCATTCATGCTAAGTGCAGATCTGAATCTAGTGTGGCTCCATCAGATGATTTTGTGCTGGATGAAGGGGTACG CCTTTTACAATTTTCTTAGTTTCATTCTCATTATTGTTCAAAATATGAGCATGCATCGACCAGCATTTTGATCATTTGAA CGATTATAATTTGTATTTTTCCCAACGCTTCCTGTTATGGTTTTACTTTCCCATCTGTAAAATGTACTTTTGAGGTGAGG GATAGGGTCCAATGTGTGACAACATGAGTGGGATGAAATAAAATCGGCAATTCTTACTGTGAGGCAGGGAAGATTCTACA ACACTGGATCCAATTATCCATGTTTTGTTGAGTCCTCATACTCAACATGATCTAACATTAAATTTTGAGGATGGAACCAC ATGACTTGTTTTGAGTCAATTTCGATAAGTATTTACCGGTACATTGGATTTCAATATATGTGTTTCACATATTTAATGAA ACTAACTTTCGTGTTATATAAACATCATGGTTAGCCTGCAAACTTTATGTGTGGTGTTTGTGCTCTTGTTAATGTTATAT AATGATAGGATGAACAGTGCGCATGAACAGTAGCAGCAGTAGCAGTTAGATTGCAGTTAGAAAGTTATTATTTAATTATT TGTTGGGGTAGTTATTGGGTTAGTTATTTACATCAGTTTATGTTAGTTATGTTCTATCAAAACTGCCTAGGGGTGGTTAT TAAATTTCTGGTTATAAATAGGAGTTGTGGCTGTTAGTTTAGACATTCAGAAATTAGAAGTTGTGTGTTTGAGGAGAGGG ACTGGACTCTCGAATTCCAGAATCTATAGGAGAGGCTGGCTCTCGAAAACCAGAGTTGTATTACTATTTTATAATAAACA CTGTTCCTATCAATTTTGTGCCTATTTAATCTCTTCTTTACTAACTCTGTTTGGTGTTATTCATTTCATGTGAGCTTGTG CATTTACTCCATGCAGTCTTCAGAAGATATTTATTTTTTTCTTCCTCTTTTGTATGCAGGGCACCACTGAGGAAGGTGGT CAAAGAAAACGAATTCGGAGTTGACTAGAGCTGACCATTTTTGTGCCCTGTAACTTATGAGTTTCTGTTTAGCATATGCT CTTACATTATTTTTGAAGTAGAGCTGAATCTTTTGTAATACATAGCCTCTTGCCTAAATCATGTACATGTATAGTTGCTC CAGTTCCAGTTCCGTGCAAATTTTTCTTGCTATCACAGGTTATATATACTCATCAATATTTTAGTTCCTGACAACTATTG TTAGCAAAAAGAAAAAGAAACTGTCAAAAAAACTATCGGATATTCGGATTACTAGTTCTACATTATTTTTGGGATGGGGG GCCATGGAGCAAGATGCTGTGTTGGATCAGTTATTTTATCTGGGAATTTGCAAAGATTCATGAGTATTACTTGCTGTCTG ATTTACTGTATTTTATATATAACTCATGCACACATGAGAGTGCAAATTACAGACATTTGATCTTTCTTCTTTCGTTAAAT TAATTATGCCAGTCATTTCAGTTCCAATGGCT 

CDS sequence (LotjaGi2g1v0457600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAGCAGCAATGACATGATGGGGCAGAAGCTTCCCCCTCCGACACTGGTGGATCGATTCAAGGCTCTACTCCGGCGACG CGATGATGACCCTCGCTTTAGGGCTTCCGAAGAGATTGTCCAGATTTACGAGCTCTTGTTGTCTGAACTCACCTGCAATC TCAAGCCCATCATCACCGATCTCACCATCATCGCCGAGCAGCAGAGGGAACACGCTGAGGGCATTGCTGATGCTATTTGC ACCAGGATTCTCGAGGTGCATGCAGATCAAAAGCTTCCTTCACTTTATCTTTTGGACAGTATTGTGAAGAATGTTGGCCA GGAATATGTTAAATACTTCTCTTTACGGCTACCTGAAGTTTTCTGTGAGGCATACAGGCAGGTTCAACCTCACTTGCATT CTGCTATGCGTCATCTCTTTGGTACCTGGTCCAAAGTCTTCTCTGCTCCTGTTCTACGTAAGATTGAAGCTCAATTGCAA TTTTCACGAGGAGTTAATAACCAACCATCCAATGTCAATCCCCTCAGGACTTCTGAATCACCTCGACCAACTCATGGGAT ACATGTTAATCCAAAATACGTAAGACAGATGGAATGCTCTAGTTCAAATATAGATAGTGTTGGAGGTGAAAGGTTGGACT CAACAGGGACAGGAGGTAATACAAGCTTTGGCCTCGTAGCTAACAAAATCCATCAATTTGGGCCTAGTAGGCATGGAAGG TCCTCCTCACCATCAAGAATTGGAATTGATATGCCTTTGTCCACATATGCGGATGAATATCCCGCTGACAATTCTACTGG CAGGACAATTGAGAGAGAATCTCCTCATCATGCAGTTGATTATGGAGTAGTTAAAACATTAGGTAGAGAAGAAGAGTTGA GTGAATGGCAGAGAAAGCAGTTTTCTGGTGATAGTCGGAAGAGATTTCAAACTATGACATACAGTCTTAGTAACGGACAA CAGCGTCAAAGTCCTAGAGCTCTGATTGATGCATATGGAAGTGACAAAAGTCAAGAAACTTCTAGCAGTAAACCTTTCTT AGTTAAACGGCTTGGTAGAAATGGTATAGACAAGGTTTCGACAACGTCATGGCAGAATACTGAAGAGGAGGAGTTCGATT GGGAAGATATGAGTCCAACATTAGTAGAACATAATAGAAATAATGGTTTTCTGCAGTCAACTACTGGTTTCACCACGGAA ATGCCAGTTACTGTTGCAGCTAATGCAATTTCTTCTGAGCAAGATACCAGGACGGGTTGGTCTAGTGGGTCTCAGCTTCT TCCGGTTGATGATTCCTCAGTTATAGCCGAAGATGTATTCGCCTCTTCAGCTTATTCTCGTGTACCACTGGGTCAGGTAT CTGGATTCCAGAATCCAATAAATCAGAGTCTAGGCTCTGGTCAGCGTAATGATGCTTGGAAGATTTCTAGTCATCCATCT AATTCTACACGACACCCCTTTAATGTTATGGGAGGAGGTAGAAATCTTCTGATGCCTCCTATTGATAACATTCCCAATAC TGATGTAAACTCGTATGGTGCTCGGCTGGCTGCGTCAAGGATGCTTCCTGGTCTCAAGTCCAATGTGGAGGGTGGTCCTC CACCAGTTTTGCCAGCAACTTTTGAAATGAGGCCCTCTGTAAATGTGCATGCTGCTCGTCCTCCCAGCTTAAACCCTGCA TTTCAGTTTAAAAACAATGTCAGATTTGAATCAATAAATGCTAATAATAACAGTGCAAATCATGGTCCCAATAATTCCTT GCTTATGCGTGAGCAGTCATTGTACAATGTTGAGGACAAAGACTTTAGTAAAGGGAACCTATATCAATTGCCTAATCAGC AATCTGGTCTGGTTTCATCTAACCCACAAAACCGAGGACAAGCACCTCAACTACAGTTTTTTCCCTCTCAGGATCCGGCA GCATCACAATTTAGTGGGAGCTCTTTTCAAGGACATGGTGGTGCTAGAAATACACATTTGTCAAATGCGCCACCAAACAT GCCATTCCCTTTACCAGGCCAAAATATGGTGAATAACTCTTTACATTTTCTGGGGGGAGCCTTGCGACCCTTACATCCAG CCCGGCCGCCATTGCTACCTCATCCTAATCATACTCCTCTTGTTTCAAGTCAACGGCCAACTGTTCCATATTCTAATTTG TTTAGTTCACTCGTCGCCCAAGGTGTAATCTCATTTCCTAATCAGGCTCCTGCACAGGATTCTGTTGGAATTGAGTTCAA TCTGGATATTCTGAAGGTGCGTCATGAATCTGCAATCAGTGCTTTATATGGTGATCTCCCTAGACAATGTACAACTTGTG GTCTCCGTTTCAAATGCCAAGATGAGCACAGTAATCACATGGATTGGCATGTGACTAAGAACAGGATGTCTAAAAACCGT AAGCAGAAGCCTTCTCGTAAGTGGTTTGTGAGTGAGAGGATGTGGCTTAGTGGTGCAGAGGCATTAGGAACAGAATCAGC TCCAGGTTTTTTGCCAAATGATACGGTTGAGGAAAAGAAAGATGATGAAGAGTTGGCTGTTCCTGCTGATGAGGACCAGA ATACATGTGCATTATGTGGAGAACCTTTTGATGAGTTTTACAGTGATGAAACGGAGGAGTGGATGTATAGAGGAGCTGTG TATCTTAATGCACCCAACGGAACAACAGCAGGTTTGGACAGGTCACAATTAGGCCCCATCATTCATGCTAAGTGCAGATC TGAATCTAGTGTGGCTCCATCAGATGATTTTGTGCTGGATGAAGGGGGCACCACTGAGGAAGGTGGTCAAAGAAAACGAA TTCGGAGTTGA 

Protein sequence (LotjaGi2g1v0457600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSSNDMMGQKLPPPTLVDRFKALLRRRDDDPRFRASEEIVQIYELLLSELTCNLKPIITDLTIIAEQQREHAEGIADAIC TRILEVHADQKLPSLYLLDSIVKNVGQEYVKYFSLRLPEVFCEAYRQVQPHLHSAMRHLFGTWSKVFSAPVLRKIEAQLQ FSRGVNNQPSNVNPLRTSESPRPTHGIHVNPKYVRQMECSSSNIDSVGGERLDSTGTGGNTSFGLVANKIHQFGPSRHGR SSSPSRIGIDMPLSTYADEYPADNSTGRTIERESPHHAVDYGVVKTLGREEELSEWQRKQFSGDSRKRFQTMTYSLSNGQ QRQSPRALIDAYGSDKSQETSSSKPFLVKRLGRNGIDKVSTTSWQNTEEEEFDWEDMSPTLVEHNRNNGFLQSTTGFTTE MPVTVAANAISSEQDTRTGWSSGSQLLPVDDSSVIAEDVFASSAYSRVPLGQVSGFQNPINQSLGSGQRNDAWKISSHPS NSTRHPFNVMGGGRNLLMPPIDNIPNTDVNSYGARLAASRMLPGLKSNVEGGPPPVLPATFEMRPSVNVHAARPPSLNPA FQFKNNVRFESINANNNSANHGPNNSLLMREQSLYNVEDKDFSKGNLYQLPNQQSGLVSSNPQNRGQAPQLQFFPSQDPA ASQFSGSSFQGHGGARNTHLSNAPPNMPFPLPGQNMVNNSLHFLGGALRPLHPARPPLLPHPNHTPLVSSQRPTVPYSNL FSSLVAQGVISFPNQAPAQDSVGIEFNLDILKVRHESAISALYGDLPRQCTTCGLRFKCQDEHSNHMDWHVTKNRMSKNR KQKPSRKWFVSERMWLSGAEALGTESAPGFLPNDTVEEKKDDEELAVPADEDQNTCALCGEPFDEFYSDETEEWMYRGAV YLNAPNGTTAGLDRSQLGPIIHAKCRSESSVAPSDDFVLDEGGTTEEGGQRKRIRS 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D 33 164 132 6.2E-39
SUPERFAMILY 34 160 127 8.5E-35
ProSiteProfiles 35 163 129 35.594
PANTHER 36 919 884 2.4E-165
SMART 38 160 123 4.1E-37
CDD 43 160 118 9.00288E-49
Pfam 91 145 55 2.6E-7
MobiDBLite 166 184 19 -
MobiDBLite 166 188 23 -
MobiDBLite 605 665 61 -
MobiDBLite 606 664 59 -
ProSitePatterns 770 790 21 -
MobiDBLite 908 936 29 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0457600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…