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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0457600 |
Transcript ID | LotjaGi2g1v0457600.1 |
Related isoforms 6 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Pre-mRNA cleavage complex 2 protein Pcf11; TAIR: AT4G04885.1 PCF11P-similar protein 4; Swiss-Prot: sp|Q0WPF2|PCFS4_ARATH Polyadenylation and cleavage factor homolog 4; TrEMBL-Plants: tr|A0A1J7HJ63|A0A1J7HJ63_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0457600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:95119492..95126723) extracted from Lotus japonicus Gifu genome v1.2.
GTCGTGTCCTTAGAGCAGTGGTGGCAACTAGTATATATGTTACCAGAGGATTGAATGATATGATAGAGAGGGTGATAGAT AGTGCATTGCTTTGCAGGGTTTGCACACGCATGTCGAATCACGTTCATACATAGTCGCTACTCCCAAACTACCCATCCAA TTCATACCCACAGCGCCGTCCCATTCAAATTCGATGGTGCGGTGACGGTGCACCACCACCACCACCATGTGACCAAATTC AAAACCCTAACCCTAACTCTCTGGATTGAATTTTCTGATTCCCCAAAATGAGCAGCAATGACATGATGGGGCAGAAGCTT CCCCCTCCGACACTGGTGGATCGATTCAAGGCTCTACTCCGGCGACGCGATGATGACCCTCGCTTTAGGGCTTCCGAAGA GATTGTCCAGATTTACGAGCTCTTGTTGTCTGAACTCACCTGCAATCTCAAGCCCATCATCACCGATCTCACCATCATCG CCGAGCAGCAGAGGGAACACGCTGAGGGCATTGCTGATGCTATTTGCACCAGGATTCTCGAGGTCTGTCTCCGTAGCCGC AGATTTTTTTGTTCATGTTTACCCTTCCCCCCTTTCCACCACCGATCATATGGTTCAATCAAAGCTATTATTTCAATTTT CTTCAGTAGATTCCTCTTCTTTTTATGTTAATTTCCTTCTTTCATCGCGCTTCTGGGTTTCACAAGTCTAGCGATTATTT ACCATTATCTGTTATCGTGATGTAAATTTGGATAAAGCCCTCGTTGTTGCTTCAGAAATGGTTAATAAATGCACACACAG AGCTAACTCTGCTGAAATTGACCACCACCATCACCTTCGTTATTACTACTTTTATCCAACTAAAACACAATCAGTAGCTA CTGGCATTTGAAGAAATTGGAATAGTACCATTTAACATAACGGATAATTGATTGGCACCGCTAATATCTTCCAAATAGTA CAATTTAGACAAACAAGCATTCTACGCATTTGAGCACTTAATCAATTTCAGGAAATGCCAAGGGTGTACACAAGTGAACA CGGACCCACATGCTTATACATACATATTTTTATATTTATAAGATTCAGGCCTGTTATCTGAACTTTGAAGAAAATTGTTA TTGTAGTATTGCTGAAATGTAGACTTTTGCACTCTCCATGTTTTCCATATCCTCACATATCCACCTCTCTCTCTCTTGGT GCGTGTATATTTAAATGGGTTACCTTAAGTTTGAGTATGCTGGTAGTTATGTAATCTTAGGATTTCTAGTCTTACCATGG CTGAAAAGGGAACATTGATTTCAAATAAATGAGAATGTGCAAGGCTGCAGTTGAATGTTAAACTAATTCTTGTATTAGAT TGAATAATTTTGTTTGGGAGTGCTGCCGTAGACTGAATATTATGACTTGCATCATGCTTTAATATATTGTCAATTTTCAA TCCTATTAAAACAAAGCACGCTTTGTTAATATTTTTATAAGAAAGTATGCTTTTCTTATCATTTACATACCAAGTATCTT TTTTGTAAATTAGCTTATCTTTGTCTAAATTAGTGATATCTGAGGCAGAATAATTAAAATTGTTAAATTACGATTCCATT AGTAAATTTCAAGAGTGACTGTTGACAATAATGATGCAGAGACTCTTACTAAGGTATTGTGTCTTGCCTAAACCCTGTGT TAAGGTTGAGTTTTAGAGATTAATTATCACTGGTCTCTCTTCTGAAATGAGTACATTGTAAGATTTTCTTAAAGAATTTG GTAAAAATGAACTGGTATTGAAATATATTATAGTTGTTAAAACAGTTAAACTCAAAATGCTAATCAAAGTCATTATAAGC TGTTGTGTTTGTTGTAATTACGAACTGCATTTTCTTATCTAATATTTCGTTAGTATTTCAATTATTATTTGAGTCGCTGC TGTTTAGGTAGTTCTTCAATTGTTGTAGCTATCCTTTCCAGGTGCATGCAGATCAAAAGCTTCCTTCACTTTATCTTTTG GACAGTATTGTGAAGAATGTTGGCCAGGAATATGTTAAATACTTCTCTTTACGGCTACCTGAAGTAGGTCAACTAGAGTT GTATTCTTTTTTTAATTCATAAAGCATGAAATCATTTTATTCTGTTATTGAAACTTTGTAGTTCTATTGTCTCCAAAGGT TTTCTGTGAGGCATACAGGCAGGTTCAACCTCACTTGCATTCTGCTATGCGTCATCTCTTTGGTACCTGGTCCAAAGTCT TCTCTGCTCCTGTTCTACGTAAGATTGAAGCTCAATTGCAATTTTCACGAGGAGTTAATAACCAACCATCCAATGTCAAT CCCCTCAGGACTTCTGAATCACCTCGACCAACTCATGGGATACATGTTAATCCAAAATACGTAAGACAGATGGAATGCTC TAGTTCAAATATAGATAGTGTAAGCTTTTATTTTTTGTGTAATCTGTCTTCTATACATACTTTGCAGGGAGTAGGCTGCA GCTTGATTACTTGCTGATTTGAAAAGGATATGTTTGGTTTTGATAATTTTTAAATGTGATGTTTTGTGTGTCGCAAATAT TGTTAATTTGTTCAGCTGCTAAGGATCTCTCAGAATTTTTTTCATTGAATCTCCTCTCATTAATGTTCTTTAGTTCCCTT GAAGCAGTTAAAGTTCTGGATGACATATTAGATAAATTCATGTTTCTAATTTGCACTTTGCACTTTGTTCTACAAGAAAA ATGATTCTGCTTATATCTGTTAGTATGCTCCTGCCAATAGAGATCCTTCAAACTATAAGATGCAATCTGACAGAGTGTTT GGTTTCATCCTCACAGGTTGGAGGTGAAAGGTTGGACTCAACAGGGACAGGAGGTAATACAAGCTTTGGCCTCGTAGCTA ACAAAATCCATCAATTTGGGCCTAGTAGGCATGGAAGGTCCTCCTCACCATCAAGAATTGGAATTGATATGCCTTTGTCC ACATATGCGGATGAATATCCCGCTGACAATTCTACTGGCAGGACAATTGAGAGAGAATCTCCTCATCATGCAGTTGATTA TGGAGTAGTTAAAACATTAGGTAGAGAAGAAGAGTTGAGTGAATGGCAGAGAAAGCAGTTTTCTGGTGATAGTCGGAAGA GATTTCAAACTATGACATACAGTCTTAGTAACGGACAACAGCGTCAAAGTCCTAGAGCTCTGATTGATGCATATGGAAGT GACAAAAGTCAAGAAACTTCTAGCAGTAAACCTTTCTTAGTTAAACGGCTTGGTAGAAATGGTATAGACAAGGTTTCGAC AACGTCATGGCAGAATACTGAAGAGGAGGAGTTCGATTGGGAAGATATGAGTCCAACATTAGTAGAACATAATAGAAATA ATGGTTTTCTGCAGTCAACTACTGGTTTCACCACGGAAATGCCAGTTACTGTTGCAGCTAATGCAATTTCTTCTGAGCAA GATACCAGGACGGGTTGGTCTAGTGGGTCTCAGCTTCTTCCGGTTGATGATTCCTCAGTTATAGCCGAAGATGTATTCGC CTCTTCAGCTGTATGTTTCCTGAACTTCTATCTTTTATCCTTTATCTTTCTAATTTATATAACAACCACGGAAACCATTT TCGACTAGGTGGGATCAGCTGCATGGATATGACAACACTATAATAGCAATGCGACTTTTTATCTTTCTACTGTTTAGCTC TTTAATATGATTGGTGATATTGTGTTTTCCCTCAAATGCATGTTTTTGGCATGCCAGTATGTGCTACTTCATGAATCATA TACCATTGGTACTTCAAGATCCAGTCATTATTATCTGGTGATGAGCGTTGCTAATTGCTTTTCATGAGAAATTCGAATCA AATGAAATGTCTTGCTTTTATTCATATTTGCCTGGAGATTGCCTTTGCCTTTGTATTATCTTCACATTGATTCATTAATT TTTCATAGTTAGAGTAAACTAGCAACTTTCAGTCCTTACTCCTTTTCTTTTAAAATTTGCCATGTACTCAGGCATGGGCC GCATGTCTAATGGTTTTGTTTATCATTAACTACGTTAAGATCATTTCTTTTAGTATACTTTAATAGGAAATTGAATTTAC CAATATTTTGCTGATAGATAATGGAATTGAAAATTCATATATTCTCTAGTTCATCTCTTCTAGTATAATTTTATAGGAAA TTGAATTTGACAATATCTTGCTGATAGATAATGTAATTGAAAATTCATATATTCTCTGCAGTATTCTCGTGTACCACTGG GTCAGGTATCTGGATTCCAGAATCCAATAAATCAGAGTCTAGGCTCTGGTCAGCGTAATGATGCTTGGAAGATTTCTAGT CATCCATCTAATTCTACACGACACCCCTTTAATGTTATGGGAGGAGGTAGAAATCTTCTGATGCCTCCTATTGATAACAT TCCCAATACTGATGTAAACTCGTATGGTGCTCGGCTGGCTGCGTCAAGGATGCTTCCTGGTCTCAAGTCCAATGTGGAGG GTGGTCCTCCACCAGTTTTGCCAGCAACTTTTGAAATGAGGCCCTCTGTAAATGTGCATGCTGCTCGTCCTCCCAGCTTA AACCCTGCATTTCAGTTTAAAAACAATGTCAGATTTGAATCAATAAATGCTAATAATAACAGTGCAAATCATGGTCCCAA TAATTCCTTGCTTATGCGTGAGCAGTCATTGTACAATGTTGAGGACAAAGACTTTAGTAAAGGGAACCTATATCAATTGC CTAATCAGCAATCTGGTCTGGTTTCATCTAACCCACAAAACCGAGGACAAGCACCTCAACTACAGTTTTTTCCCTCTCAG GATCCGGCAGCATCACAATTTAGTGGGAGCTCTTTTCAAGGACATGGTGGTGCTAGAAATACACATTTGTCAAATGCGCC ACCAAACATGCCATTCCCTTTACCAGGCCAAAATATGGTGAATAACTCTTTACATTTTCTGGGGGGAGCCTTGCGACCCT TACATCCAGCCCGGCCGCCATTGCTACCTCATCCTAATCATACTCCTCTTGTTTCAAGTCAACGGCCAACTGTTCCATAT TCTAATTTGTTTAGTTCACTCGTCGCCCAAGGTGTAATCTCATTTCCTAATCAGGCTCCTGCACAGGTAACTAAATCTTT TAAGTTTATTTATTTTTCCTTTCTCCTGCCATTGTTGATCTGATTGTGCAAACCAAGTGTAATGAAATTGAGTTACTTGT TTTTAGGATTCTGTTGGAATTGAGTTCAATCTGGATATTCTGAAGGTGCGTCATGAATCTGCAATCAGTGCTTTATATGG TGATCTCCCTAGACAATGTACAACTTGTGGTCTCCGTTTCAAATGCCAAGATGAGCACAGTAATCACATGGATTGGCATG TGACTAAGAACAGGATGTCTAAAAACCGTAAGCAGAAGCCTTCTCGTAAGTGGTTTGTGAGTGAGAGGATGTGGCTTAGT GGTGCAGAGGCATTAGGAACAGAATCAGCTCCAGGTTTTTTGCCAAATGATACGGTTGAGGAAAAGAAAGATGATGAAGA GTTGGCTGTTCCTGCTGATGAGGACCAGAATACATGTGCATTATGTGGAGAACCTTTTGATGAGTTTTACAGTGATGAAA CGGAGGAGTGGATGTATAGAGGAGCTGTGTATCTTAATGCACCCAACGGAACAACAGCAGGTTTGGACAGGTCACAATTA GGCCCCATCATTCATGCTAAGTGCAGATCTGAATCTAGTGTGGCTCCATCAGATGATTTTGTGCTGGATGAAGGGGTACG CCTTTTACAATTTTCTTAGTTTCATTCTCATTATTGTTCAAAATATGAGCATGCATCGACCAGCATTTTGATCATTTGAA CGATTATAATTTGTATTTTTCCCAACGCTTCCTGTTATGGTTTTACTTTCCCATCTGTAAAATGTACTTTTGAGGTGAGG GATAGGGTCCAATGTGTGACAACATGAGTGGGATGAAATAAAATCGGCAATTCTTACTGTGAGGCAGGGAAGATTCTACA ACACTGGATCCAATTATCCATGTTTTGTTGAGTCCTCATACTCAACATGATCTAACATTAAATTTTGAGGATGGAACCAC ATGACTTGTTTTGAGTCAATTTCGATAAGTATTTACCGGTACATTGGATTTCAATATATGTGTTTCACATATTTAATGAA ACTAACTTTCGTGTTATATAAACATCATGGTTAGCCTGCAAACTTTATGTGTGGTGTTTGTGCTCTTGTTAATGTTATAT AATGATAGGATGAACAGTGCGCATGAACAGTAGCAGCAGTAGCAGTTAGATTGCAGTTAGAAAGTTATTATTTAATTATT TGTTGGGGTAGTTATTGGGTTAGTTATTTACATCAGTTTATGTTAGTTATGTTCTATCAAAACTGCCTAGGGGTGGTTAT TAAATTTCTGGTTATAAATAGGAGTTGTGGCTGTTAGTTTAGACATTCAGAAATTAGAAGTTGTGTGTTTGAGGAGAGGG ACTGGACTCTCGAATTCCAGAATCTATAGGAGAGGCTGGCTCTCGAAAACCAGAGTTGTATTACTATTTTATAATAAACA CTGTTCCTATCAATTTTGTGCCTATTTAATCTCTTCTTTACTAACTCTGTTTGGTGTTATTCATTTCATGTGAGCTTGTG CATTTACTCCATGCAGTCTTCAGAAGATATTTATTTTTTTCTTCCTCTTTTGTATGCAGGGCACCACTGAGGAAGGTGGT CAAAGAAAACGAATTCGGAGTTGACTAGAGCTGACCATTTTTGTGCCCTGTAACTTATGAGTTTCTGTTTAGCATATGCT CTTACATTATTTTTGAAGTAGAGCTGAATCTTTTGTAATACATAGCCTCTTGCCTAAATCATGTACATGTATAGTTGCTC CAGTTCCAGTTCCGTGCAAATTTTTCTTGCTATCACAGGTTATATATACTCATCAATATTTTAGTTCCTGACAACTATTG TTAGCAAAAAGAAAAAGAAACTGTCAAAAAAACTATCGGATATTCGGATTACTAGTTCTACATTATTTTTGGGATGGGGG GCCATGGAGCAAGATGCTGTGTTGGATCAGTTATTTTATCTGGGAATTTGCAAAGATTCATGAGTATTACTTGCTGTCTG ATTTACTGTATTTTATATATAACTCATGCACACATGAGAGTGCAAATTACAGACATTTGATCTTTCTTCTTTCGTTAAAT TAATTATGCCAGTCATTTCAGTTCCAATGGCT
CDS sequence (LotjaGi2g1v0457600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCAGCAATGACATGATGGGGCAGAAGCTTCCCCCTCCGACACTGGTGGATCGATTCAAGGCTCTACTCCGGCGACG CGATGATGACCCTCGCTTTAGGGCTTCCGAAGAGATTGTCCAGATTTACGAGCTCTTGTTGTCTGAACTCACCTGCAATC TCAAGCCCATCATCACCGATCTCACCATCATCGCCGAGCAGCAGAGGGAACACGCTGAGGGCATTGCTGATGCTATTTGC ACCAGGATTCTCGAGGTGCATGCAGATCAAAAGCTTCCTTCACTTTATCTTTTGGACAGTATTGTGAAGAATGTTGGCCA GGAATATGTTAAATACTTCTCTTTACGGCTACCTGAAGTTTTCTGTGAGGCATACAGGCAGGTTCAACCTCACTTGCATT CTGCTATGCGTCATCTCTTTGGTACCTGGTCCAAAGTCTTCTCTGCTCCTGTTCTACGTAAGATTGAAGCTCAATTGCAA TTTTCACGAGGAGTTAATAACCAACCATCCAATGTCAATCCCCTCAGGACTTCTGAATCACCTCGACCAACTCATGGGAT ACATGTTAATCCAAAATACGTAAGACAGATGGAATGCTCTAGTTCAAATATAGATAGTGTTGGAGGTGAAAGGTTGGACT CAACAGGGACAGGAGGTAATACAAGCTTTGGCCTCGTAGCTAACAAAATCCATCAATTTGGGCCTAGTAGGCATGGAAGG TCCTCCTCACCATCAAGAATTGGAATTGATATGCCTTTGTCCACATATGCGGATGAATATCCCGCTGACAATTCTACTGG CAGGACAATTGAGAGAGAATCTCCTCATCATGCAGTTGATTATGGAGTAGTTAAAACATTAGGTAGAGAAGAAGAGTTGA GTGAATGGCAGAGAAAGCAGTTTTCTGGTGATAGTCGGAAGAGATTTCAAACTATGACATACAGTCTTAGTAACGGACAA CAGCGTCAAAGTCCTAGAGCTCTGATTGATGCATATGGAAGTGACAAAAGTCAAGAAACTTCTAGCAGTAAACCTTTCTT AGTTAAACGGCTTGGTAGAAATGGTATAGACAAGGTTTCGACAACGTCATGGCAGAATACTGAAGAGGAGGAGTTCGATT GGGAAGATATGAGTCCAACATTAGTAGAACATAATAGAAATAATGGTTTTCTGCAGTCAACTACTGGTTTCACCACGGAA ATGCCAGTTACTGTTGCAGCTAATGCAATTTCTTCTGAGCAAGATACCAGGACGGGTTGGTCTAGTGGGTCTCAGCTTCT TCCGGTTGATGATTCCTCAGTTATAGCCGAAGATGTATTCGCCTCTTCAGCTTATTCTCGTGTACCACTGGGTCAGGTAT CTGGATTCCAGAATCCAATAAATCAGAGTCTAGGCTCTGGTCAGCGTAATGATGCTTGGAAGATTTCTAGTCATCCATCT AATTCTACACGACACCCCTTTAATGTTATGGGAGGAGGTAGAAATCTTCTGATGCCTCCTATTGATAACATTCCCAATAC TGATGTAAACTCGTATGGTGCTCGGCTGGCTGCGTCAAGGATGCTTCCTGGTCTCAAGTCCAATGTGGAGGGTGGTCCTC CACCAGTTTTGCCAGCAACTTTTGAAATGAGGCCCTCTGTAAATGTGCATGCTGCTCGTCCTCCCAGCTTAAACCCTGCA TTTCAGTTTAAAAACAATGTCAGATTTGAATCAATAAATGCTAATAATAACAGTGCAAATCATGGTCCCAATAATTCCTT GCTTATGCGTGAGCAGTCATTGTACAATGTTGAGGACAAAGACTTTAGTAAAGGGAACCTATATCAATTGCCTAATCAGC AATCTGGTCTGGTTTCATCTAACCCACAAAACCGAGGACAAGCACCTCAACTACAGTTTTTTCCCTCTCAGGATCCGGCA GCATCACAATTTAGTGGGAGCTCTTTTCAAGGACATGGTGGTGCTAGAAATACACATTTGTCAAATGCGCCACCAAACAT GCCATTCCCTTTACCAGGCCAAAATATGGTGAATAACTCTTTACATTTTCTGGGGGGAGCCTTGCGACCCTTACATCCAG CCCGGCCGCCATTGCTACCTCATCCTAATCATACTCCTCTTGTTTCAAGTCAACGGCCAACTGTTCCATATTCTAATTTG TTTAGTTCACTCGTCGCCCAAGGTGTAATCTCATTTCCTAATCAGGCTCCTGCACAGGATTCTGTTGGAATTGAGTTCAA TCTGGATATTCTGAAGGTGCGTCATGAATCTGCAATCAGTGCTTTATATGGTGATCTCCCTAGACAATGTACAACTTGTG GTCTCCGTTTCAAATGCCAAGATGAGCACAGTAATCACATGGATTGGCATGTGACTAAGAACAGGATGTCTAAAAACCGT AAGCAGAAGCCTTCTCGTAAGTGGTTTGTGAGTGAGAGGATGTGGCTTAGTGGTGCAGAGGCATTAGGAACAGAATCAGC TCCAGGTTTTTTGCCAAATGATACGGTTGAGGAAAAGAAAGATGATGAAGAGTTGGCTGTTCCTGCTGATGAGGACCAGA ATACATGTGCATTATGTGGAGAACCTTTTGATGAGTTTTACAGTGATGAAACGGAGGAGTGGATGTATAGAGGAGCTGTG TATCTTAATGCACCCAACGGAACAACAGCAGGTTTGGACAGGTCACAATTAGGCCCCATCATTCATGCTAAGTGCAGATC TGAATCTAGTGTGGCTCCATCAGATGATTTTGTGCTGGATGAAGGGGGCACCACTGAGGAAGGTGGTCAAAGAAAACGAA TTCGGAGTTGA
Protein sequence (LotjaGi2g1v0457600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSNDMMGQKLPPPTLVDRFKALLRRRDDDPRFRASEEIVQIYELLLSELTCNLKPIITDLTIIAEQQREHAEGIADAIC TRILEVHADQKLPSLYLLDSIVKNVGQEYVKYFSLRLPEVFCEAYRQVQPHLHSAMRHLFGTWSKVFSAPVLRKIEAQLQ FSRGVNNQPSNVNPLRTSESPRPTHGIHVNPKYVRQMECSSSNIDSVGGERLDSTGTGGNTSFGLVANKIHQFGPSRHGR SSSPSRIGIDMPLSTYADEYPADNSTGRTIERESPHHAVDYGVVKTLGREEELSEWQRKQFSGDSRKRFQTMTYSLSNGQ QRQSPRALIDAYGSDKSQETSSSKPFLVKRLGRNGIDKVSTTSWQNTEEEEFDWEDMSPTLVEHNRNNGFLQSTTGFTTE MPVTVAANAISSEQDTRTGWSSGSQLLPVDDSSVIAEDVFASSAYSRVPLGQVSGFQNPINQSLGSGQRNDAWKISSHPS NSTRHPFNVMGGGRNLLMPPIDNIPNTDVNSYGARLAASRMLPGLKSNVEGGPPPVLPATFEMRPSVNVHAARPPSLNPA FQFKNNVRFESINANNNSANHGPNNSLLMREQSLYNVEDKDFSKGNLYQLPNQQSGLVSSNPQNRGQAPQLQFFPSQDPA ASQFSGSSFQGHGGARNTHLSNAPPNMPFPLPGQNMVNNSLHFLGGALRPLHPARPPLLPHPNHTPLVSSQRPTVPYSNL FSSLVAQGVISFPNQAPAQDSVGIEFNLDILKVRHESAISALYGDLPRQCTTCGLRFKCQDEHSNHMDWHVTKNRMSKNR KQKPSRKWFVSERMWLSGAEALGTESAPGFLPNDTVEEKKDDEELAVPADEDQNTCALCGEPFDEFYSDETEEWMYRGAV YLNAPNGTTAGLDRSQLGPIIHAKCRSESSVAPSDDFVLDEGGTTEEGGQRKRIRS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 33 | 164 | 132 | 6.2E-39 | ||
SUPERFAMILY | 34 | 160 | 127 | 8.5E-35 | ||
ProSiteProfiles | 35 | 163 | 129 | 35.594 | ||
PANTHER | 36 | 919 | 884 | 2.4E-165 | – | |
SMART | 38 | 160 | 123 | 4.1E-37 | ||
CDD | 43 | 160 | 118 | 9.00288E-49 | – | |
Pfam | 91 | 145 | 55 | 2.6E-7 | ||
MobiDBLite | 166 | 184 | 19 | - | – | |
MobiDBLite | 166 | 188 | 23 | - | – | |
MobiDBLite | 605 | 665 | 61 | - | – | |
MobiDBLite | 606 | 664 | 59 | - | – | |
ProSitePatterns | 770 | 790 | 21 | - | ||
MobiDBLite | 908 | 936 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of LotjaGi2g1v0457600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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