Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0007100 |
| Transcript ID | LotjaGi3g1v0007100.7 |
| Related isoforms 11 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Topless-related protein 1; TAIR: AT1G80490.2 TOPLESS-related 1; Swiss-Prot: sp|Q0WV90|TPR1_ARATH Topless-related protein 1; TrEMBL-Plants: tr|A0A0A0KTH7|A0A0A0KTH7_CUCSA Uncharacterized protein; Found in the gene: LotjaGi3g1v0007100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:848519..856657) extracted from Lotus japonicus Gifu genome v1.2.
GAATCTTCTCTCGTTGAAGACTGGTTGTGATGTCTTCACTCAGTAGGGAGTTGGTGTTCCTGATCCTGCAATTTCTGGAT GAGGAAAAGTTCAAAGAGACTGTTCACAAGTAGGGGGATTTGTTCCATTTGATTTTGTCATTTTTTGTTATTATTATATT CGCGGCGTGTGTTTGTTCTGGCGTTAGTTCAAATGTAAATGTGATTTCACTTATCTTAATACATATACATTACCATAGAA ACTAAAATTTGCCAATTAAGGAAGCGAGATTTTGACATGTTGAGTACAACGCGATCCACATTGAGTTTGACGAAAATACA AACACACACGGCATCTCTAGTATTTATTTACTTTATCACATTTACTTTGATCACATTAATTGATTAAATGGTTTTCTTTT CTTTTTGAAAATATTAGGCTTGAGCAGGAGTCTGGATTTTTCTTTAACATGAAGTATTTTGAAGACGAAGTGCACAATGG CAATTGGGATGAGGTTCAGAGGTATCTCTCTGGTTTCACAAAAGTAGATGATAATAGGTACTCTATGAAGATATTTTTTG AGATAAGAAAGCAGAAATACCTGGAGGCATTGGATAAGTAAGCTCACAACAAGTTTACATTTATATTCTGTCGTTGACAC TTAACAGGGTTTGTTAGTGTAGGTATGGAAACTAAGCTGCTTTTAATTTAAATTTTGGTAGGCATGATCGGTCCAAGGCA GTAGAAATATTAGCGAAGGATTTGAAAGTATTCGCCACATTTAATGAGGAGCTGTTCAAAGAAATCACACAGCTTTTGAC ATTGGAGAATTTTAGGTACGAAATTGTAGTTTCTTACTTAATTATTAAACTTCTGTGTTAGATGTAGAGAGCAAGTGATT TCTGCTTTTAGTTTACAGGGAAAACGAACAATTGTCTAAGTATGGAGATACGAAATCTGCTAGAACAATCATGTTGGTTG AGCTCAAAAAGTTGATCGAGGCGAATCCCTTATTTCGTGACAAATTGCAGTTTCCCAACCTTAAAAATTCAAGGTTACGG ACTCTCATCAATCAGAGGTAATTCAAGGAGCGATGGCCATGATTTTCCTTTTGGTTATCTTTACTTACTATCGGAAGAGC TCATCTACCATATTTATATCTCTGTTTTCTTCGGTGAATACATAGATCGTGTTATAAATTGTTACCGAACCACTTAACTC ATTACTAGTATTGCTTTATCAATGCTAGGATTCGTAATTTTATTCATAGAACGTTTCGAATACCAATTGTTGCAATATTT GGCTGTGCAGTGCCGGCTTCAATGCATTTTTTTCAGCTAAATGATGGGTCATTCTCTGTGTACTGGAGATACTCCATACG TGTTTGCAGTGAAGATACTCTTTAAACAAATGATCAATTTATTTTATTTTTTGGATAACTGATTTCCTTCTTAAAATTGA AATTACAGCTTGAATTGGCAGCATCAACTTTGTAAGAATCCTCGGCCGAATCCGGATATAAAAACTCTTTTTGTGGATCA CTCTTGTGGACAACCAAACGGTGCACGGGCTCCATCACCTGCTAATAACCCACTGCTAGGATCCTTACCAAAGGCCGGAG GATTTCCTCCTCTTGGTGCACATGGGGTAGGTTACCTAACTCATTTGGTTTAGGCTTACTTACATTTTGGTTCCTATAGT TTTGAAAATGTGTTATTTTGATCTCTATAGTTTCAATTGCTCCAATTAAATCATACTTTTAAAACTGAATAAATTTGGTC CATATGTTAATTTGTCATCTAATAACTAACGGAAAAAATGGACATGTATCACAAGTTTTGAGATGTAAAGTGACATAAAT TGTCTTAATATGACATTCACGTATAAAATTGTGATCCGCGTCAACTTTTTCGTTAATTAGTAGATGACAAGTTAATGTTT GGACGGTATTTGTTCAATTTTGAAAGTAGGACTTAATTGGAGCAATTGAAACCATAGGAACCCAATCACGCATTTGTAAA ATTAGAGGGACCAAAAGTGCAATTAAGCCTTTGGTTTAATAGGGTTTGCATAACATGTGATATATAGGTTCTTATTTTTG TGCTGGACTGTGTAGCCCTTTCAAACTGCTCCAGCCCCTGCGCCGTCACCCCTGGCTGGCTGGATGTCGAATCCTAATCC TACCACGGCAGCACATGCCGCAGTTTCTGGAGGACCAGCTATCGGTCTTGGTGGACCATCAATTCCTGGTACTCAGTTCT TTTGCTGTCTGTTATCTCCAACTCTTAATGCCTAATGGTAATTAAAATATTCCGACTATGTTAATTACGTATAGTCTTTG ACCTCAGTTGTTTCGTTGCCTTCTCAAGCTGCTTTGAAGCACCCGAGGACACCTCCAACCAACCCTTCTGTTGACTACCC ATCGGGAGATTCCGATCATGTTTCTAAGAGAACAAGATCAATAGGAATGTCAGACGAGGTAAGCTAGTATCTTTAATGGA AATATGACTCGTGGTCTTGTAATTCATAGTTTCGTACCCATGCAAGTTTTTACCTGTAACATTTCTACTACCAATCTTTC ATCATTTTGTGCAGGGAAATTTACCTGTGAATGTTTTGTCAGCAACATTCCCATCTCATGGTCATGGTCAGGCTTTTAAT GCACCTGATGACTTGCCAAAGACTGTCCTGCGAACTCTAAACCAAGGGTCGTCAACTATGAGCATGGATTTTCATCCAGT TCGACAGACTTTACTTCTTGGTTGGCTGCGCTTCTAATGCCTTTTAATACTGTTGTTGACTTGTTTTGATTGAATTTATG TACCATTTATACTGTCAATTGACTGAGTTATTTTCTTGATGCAATGTGTCAGTTGGTACTAATGTGGGAGACATTGCTTT GTGGGAAGTGGGTTCTAGGGAGCGGCTGGTCTTAAGGAACTTCAAAGTTTGGGATCTAAGTGCTTGTTCAATGTCATTTC AGGTTGGTCTTTGTCATCTCTGACTCTGTCCATTGATATTCTAGATGGATATTTGTACCAAACCATGAAACTTGTAACTG AAAATAAAACTAATCATGATCAATTCAGGCTGCTCTTGTCAAAGATCCAGGCGTCTCTGTCAATCGTGTGATTTGGAGTC CTGATGGGGCTTTATTTGGTAAATTGAGTGTTTGAAAAAATAATTGAATTTGATATATTGATCTTAGAATGCATACTTTA AAAAGTAAACTCAATCATGAATATGCATTTGTTTGATAAACAGGAGTTGCTTACTCAAGGCACATTGTTCAGATATACTC TTACCATGGTGGGGATGAAGTACGACAGCAACTGGAGGTATACAAACACTCATAAATAATGAAGATTTTTCGTTGCTTTA TGTTCTATTTTTAAGTTCTCATAATTGCTTACTTATGAACTTTCTTTATAGATTGATGCGCATGTTGGCGGAGTAAATGA TATAGCATTTTCTCACCCAATTAAGCAACTAAGTGTGATAACATGTGGTGATGATAAGACCATTAAGGTAGGTTTATCAG ATCATAGGCTTGGTTTGCTAATATGAGTGTACCGTAGGTTGCTAACTATGTTATGTAACTTAAGGTCTGGGATGCTGTTT CGGGTACAAAGCAGTATACTTTTGAAGGTCATGAAGCTCCCGTTTATTCTGTCTGCCCGCATTATAAAGAAAACATTCAG GTAAATGTTGACTTTAGTACCTTCGGTAAAAATGTTAGTTGAGTTTATTGGTATGATTCGGTTATCTCACTTAGTAGAGT GCCACAATGAAAATCTTCTGAATATGTTTCTAGTTGGTTTTCTTGCTGATACTCTGTCTTAAATGTTGTAGTTCATCTTT TCCACGGCATTGGATGGAAAGATAAAAGCATGGTTGTATGACAATATGGGATCTCGTGTTGATTATGATGCACCCGGCCG TTGGTGTTCAACTATGGCCTATAGTGCTGATGGTTCAAGGTCTATATTCTCAACCATGGCTACTTGTCCTCTGAATCTTA TTGTTTGGTTAAATTATAATATCTACTTTGATCGCATTCTGTCCTGACATTTCTCTTTGAATGTATACCATAGGCTCTTT TCATGTGGAACTAGCAAGGATGGGGAATCTGCTATTGTTGAATGGAATGAAAGCGAAGGAGCTTTTAAAAGGACTTATCA AGGTTTTCGAAAACGATCTTTGGGTGTTGTACAATTTGATACAACCAAAAACCGATTTTTGGCTGCCGGTGATGATTTCT CCATTAAATTTTGGGATATGGACAATATTCAGCTTTTGACAACTATTGATGCTGATGGGGGTCTCCCTGTAAGTTCATTA ATTTATTGCAAATTAGATTCTGGTTTCTGGAATAGTAGTTACTGAATGTCTGATCGTTTCCTTATCTGAATTCTAGGCAA GTCCGCGTATCCGTTTCAACAAAGATGGATCTCTTTTAGCCGTCTCTGCAAATGAGAATGGAATTAAAATCTTATCCAAT GAAGATGGTATTCGTTTGTTGCGTTCATTTGAGAATTCTATGTTTGATGCAACAAGAACGTCGGAAGCCATGACAAAGGT AGACTTATAGATATTTTCCTGACCTCTCATTAACAAAGCCTGGTCTGACTCATGGTATTTTTCGCAGCCTACAATAAATC CAATTTCAGCTTCCGCCGTTGCTGCCTCTAGTGCTGCACATTCAGATAGGGCCTCATTTGCGGTAGCTATAACTGGAATG GTTAGTTTTTCTTGTCTTTTGTATCAGTAGGATCTGTTATTTACTTGAATGCTACTAGTAGCCTTTTATTTTTTAATGTG TCTAGTTTCTGTCTCATTTCACAACTCTTATTTGTTAGATTAATGTATCCCAATAGGAAAAAAATTAAAAAAAAGGTTAA GCATCTCATTGTGATTGTGATGATGTATTTATTATCACTGCTTTTGTTGTTGTTAATAAACTGTTTCAATTTCAACTCAT CAGAATGGGGATGCCCGGAACCTGGGTGATGTTAAACCTAGAATAAGTGATGAATCAAATGACAAGTCAAAGATATGGAA GCTCACCGAAATCAATGAACCTTCTCAATGTAGATCCTTGAAGCTACCTGAGAATCAAAGAGTAACCAAGGTATGTTATT TACTTCCTAATTGTATTTATTTTAAATATCCACATGACTAATTATATCAAGCACCCTGTCATTAGTGTTTTTATGTCAAT GGAATTTGTCTTTTTTTTTTTTATAAACTCAGTTTTAATTGGATAACGAAATGCTGGATATGTGTTGTGTGTGCGTGATT GTGTATTTCCTTGTTATGCCTTGGATTATTGTAACTGCGTGGATTCCAGTCTCCTCTATCTGCAAAATATTTGGGGTACA TTATTTTCATATCAAAGCCAGGTAGCATGGTGTTAACTGTGTTATGATTTCTCTGAAAACCATGAGCATTGGGTACCTTG TAACATGAATACCTTACAGAGTGAGCTTTTTGCAAGATCGTCCTGCTTTTGTTTGATGTACTTTCTTTGGGAAAAGCTTG CCTGTCCATCTTAATCTGTCATTTTTATTAACACTTCGATATAATATGGGTCTTGGTGCATAAAAATGTGTGCAGATGCA GTTATTTATTCAATTAGCTTGCTGTTTCCCTTAAGTTTTGCATCTTATTTGTAATTTATTGTAGTCTTTTATGTTAATGT CACAATACATTTCGTCTTAGAGGCGTTTAAGCATAGAATAATGAAAATTTAACAAGCCTTAGTAGCTTATGCTCCAAACT GAAATTGCTCTGAACTTCTAATTGTCTATATCCTTGTGATGACAGATATCAAGGTTGATATACACTAACTCAGGTAATGC TATTCTGGCATTAGCTTCAAATGCCATTCATCTTCTCTGGAAATGGCAACGAAGTGACCGCAATTCACCTGCCAAGGTGT GAAAATATGTAAATTTACTTTTGTCTGATTACTCTATTCACAAAATTGGGAATAGAAATTGCATTATTCTCTGATGTTTA TATTTATTCCTGTAGGCAAGTATCACTGTGCCACCTCAGTTGTGGCAACCTTCAAGTGGCATCTTGATGACTAATGACAT TAACGATAACAATCATCCTGAGGAAGCTGTTCCCTGCTTTGCTCTGTCCAAAAACGATTCTTATGTGATGTCAGCGTCGG GAGGGAAGATTTCTCTGTTCAATATGATGACATTTAAGGTGAGCTATGATCCCTAGTCACGATTCAAGGCTTTAATCGGT TTGCAACTGACACATTTTGATGTTCTTGGCCAATTGCAGACAATGGCAATGTTCAAGCCAGCACCACCTATGGCAACCTT TCTGGCTTTCCACCCTCAGGATAACAATATAATTGCTATAGGCATGGATGATTCTTCGATTCAGATATATAATGTTCGTA TGGATCAGGTATCATGCTGTCTGTAAACATTTCCTTTTGAGTTTTGATTTATGATTTGAGTAATTAGGTGCTTATACATG ATTTTTTTCTTTGCAGTTTAAAAGTAAACTCAAAGGTCATTCTAAAAGAATAACTGGTCTCGCTTTTTCGCATATACTGA ATGTACTAGTTTCTTCTGGGGCAGATGCTCAGGTAATAATTGTCCATTGTATATCTGTGTCTGGATTCTGGAATCTGTCT TTTATATGATTAAATTGCATGATATTATAATTTTGAATCTGTAACTAGTTTTCAGTTTTTCACAGATTATGACTCCCTTG GAGATGTTTTTTGCAATTCAAATTTCATTAGTAATCATATGGTATCTGTCTATTGTGCAGCTTTGTGTGTGGAATACCGA TGGATGGGAAAAGCAGAAAACTCGGCTCTTACAACTTCCTGCTGGGAGGACTCCACCGTCGCAGGCAGATACCCGTGTAC AATTTCATCAGGATCAGGTCCGCTTCTTGGTTGTACATGAAACTCAGCTTGCAATTCATGAAGCAACTAAACTAGACTGT TTACACCAGGTTAGTTCAGGAAGTTCAGTTTTATGGTAACTGTTAATAGTTTAATTTTATCTTTTGTCTGATGCATAGAA CCTGGATTGCAGTGGTTCCCAAGAGATTCTGCCGCACCAATATTGCATGCGACTTTCTCTTGTGATAGCCAGCTGATATT TGCCAGCTTTTTAGATGCAACAATCAGTGTATTCAGTGCTACAAACCTTAGATTACAATGCCGGATCAATCCTTCTGCTT ATCTTTCTGCAAGTGCCAGGTATTATTTCTTGCTTGTTAGACGTTCTATCGCATTTTGCACCACGCTTGTTCCAAGTTAT TAACGGTTTTCTTAGTTTATATTTTTGACAATGTAGAAAAAAATTAAATTCCCAGGTAGAAATTGCATTTACAGTTATGA TTTCATTTTCTTTTGGAAGAAATTGGGTTGTAAATATTTAAAATCCAAAGCAGTTCTTGTTCTTCTACCTCTATTCTTTC TTATCTCATTTTGTTATTCTATTTTGGTAGAAAAACCTCACTTTAGTTGGAAATATTTTCTTGTGGATGAATTTTAATTT TTTCACAACACTTTGAGGTTAGTGGTATGCAGAATCACTGCTTACTTGTAAAGATTATATAACATGAATAAATTAGAGGA GATTGTCAAGTATGTTTTACTTTAAAAAGTGTTTCCACAAAATAGAAGGAAGTTAGTCTTCAGTGAATCTAATTGTTCTA ATGCACATAATTCATTGATTCAGAGTTCGCTTGTTTTATATTAGAAACATCAAAATGTTTTTTGTAGTTCTTTTCTTTTT CGTTCTTTGACCAGAGTGCCCCCCCCCCCCCCCTAAGGGCAACACTAATCCGGTTTGGGAAATTGACAGTCCCTCCCAAC AGATTATTTTTCTGGGGTTTGAACTTGTGACCTCACCTTTTTTGTAGTACTTGTTGTTGAATACTATGCTTCTGTTTCTT TGCAGCAATGGTAATGTGCAACCCCTTGTAATTGCTGCACATCCACAAGAACCAAATCAATTTGCTGTAGGACTGTCAGA TGGTGTTGTTCATGTCGTTGAACCCCTTGAGTCTGAAGGCAAGTGGGGTGTGCCTCCACCTAGTGAGAATGGGTCAGCAA GCAATGTAGCAGGGGCAGCTTCTTCAGTTAGAGCTTCTTCAGATGAAGCTCAGAGATAA
CDS sequence (LotjaGi3g1v0007100.7) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTTCACTCAGTAGGGAGTTGGTGTTCCTGATCCTGCAATTTCTGGATGAGGAAAAGTTCAAAGAGACTGTTCACAA GCTTGAGCAGGAGTCTGGATTTTTCTTTAACATGAAGTATTTTGAAGACGAAGTGCACAATGGCAATTGGGATGAGGTTC AGAGGTATCTCTCTGGTTTCACAAAAGTAGATGATAATAGGTACTCTATGAAGATATTTTTTGAGATAAGAAAGCAGAAA TACCTGGAGGCATTGGATAAGCATGATCGGTCCAAGGCAGTAGAAATATTAGCGAAGGATTTGAAAGTATTCGCCACATT TAATGAGGAGCTGTTCAAAGAAATCACACAGCTTTTGACATTGGAGAATTTTAGGGAAAACGAACAATTGTCTAAGTATG GAGATACGAAATCTGCTAGAACAATCATGTTGGTTGAGCTCAAAAAGTTGATCGAGGCGAATCCCTTATTTCGTGACAAA TTGCAGTTTCCCAACCTTAAAAATTCAAGGTTACGGACTCTCATCAATCAGAGCTTGAATTGGCAGCATCAACTTTGTAA GAATCCTCGGCCGAATCCGGATATAAAAACTCTTTTTGTGGATCACTCTTGTGGACAACCAAACGGTGCACGGGCTCCAT CACCTGCTAATAACCCACTGCTAGGATCCTTACCAAAGGCCGGAGGATTTCCTCCTCTTGGTGCACATGGGCCCTTTCAA ACTGCTCCAGCCCCTGCGCCGTCACCCCTGGCTGGCTGGATGTCGAATCCTAATCCTACCACGGCAGCACATGCCGCAGT TTCTGGAGGACCAGCTATCGGTCTTGGTGGACCATCAATTCCTGCTGCTTTGAAGCACCCGAGGACACCTCCAACCAACC CTTCTGTTGACTACCCATCGGGAGATTCCGATCATGTTTCTAAGAGAACAAGATCAATAGGAATGTCAGACGAGGGAAAT TTACCTGTGAATGTTTTGTCAGCAACATTCCCATCTCATGGTCATGGTCAGGCTTTTAATGCACCTGATGACTTGCCAAA GACTGTCCTGCGAACTCTAAACCAAGGGTCGTCAACTATGAGCATGGATTTTCATCCAGTTCGACAGACTTTACTTCTTG TTGGTACTAATGTGGGAGACATTGCTTTGTGGGAAGTGGGTTCTAGGGAGCGGCTGGTCTTAAGGAACTTCAAAGTTTGG GATCTAAGTGCTTGTTCAATGTCATTTCAGGCTGCTCTTGTCAAAGATCCAGGCGTCTCTGTCAATCGTGTCTGGGATGC TGTTTCGGGTACAAAGCAGTATACTTTTGAAGGTCATGAAGCTCCCGTTTATTCTGTCTGCCCGCATTATAAAGAAAACA TTCAGTTCATCTTTTCCACGGCATTGGATGGAAAGATAAAAGCATGGTTGTATGACAATATGGGATCTCGTGTTGATTAT GATGCACCCGGCCGTTGGTGTTCAACTATGGCCTATAGTGCTGATGGTTCAAGGCTCTTTTCATGTGGAACTAGCAAGGA TGGGGAATCTGCTATTGTTGAATGGAATGAAAGCGAAGGAGCTTTTAAAAGGACTTATCAAGGTTTTCGAAAACGATCTT TGGGTGTTGTACAATTTGATACAACCAAAAACCGATTTTTGGCTGCCGGTGATGATTTCTCCATTAAATTTTGGGATATG GACAATATTCAGCTTTTGACAACTATTGATGCTGATGGGGGTCTCCCTGCAAGTCCGCGTATCCGTTTCAACAAAGATGG ATCTCTTTTAGCCGTCTCTGCAAATGAGAATGGAATTAAAATCTTATCCAATGAAGATGGTATTCGTTTGTTGCGTTCAT TTGAGAATTCTATGTTTGATGCAACAAGAACGTCGGAAGCCATGACAAAGCCTACAATAAATCCAATTTCAGCTTCCGCC GTTGCTGCCTCTAGTGCTGCACATTCAGATAGGGCCTCATTTGCGGTAGCTATAACTGGAATGAATGGGGATGCCCGGAA CCTGGGTGATGTTAAACCTAGAATAAGTGATGAATCAAATGACAAGTCAAAGATATGGAAGCTCACCGAAATCAATGAAC CTTCTCAATGTAGATCCTTGAAGCTACCTGAGAATCAAAGAGTAACCAAGATATCAAGGTTGATATACACTAACTCAGGT AATGCTATTCTGGCATTAGCTTCAAATGCCATTCATCTTCTCTGGAAATGGCAACGAAGTGACCGCAATTCACCTGCCAA GGCAAGTATCACTGTGCCACCTCAGTTGTGGCAACCTTCAAGTGGCATCTTGATGACTAATGACATTAACGATAACAATC ATCCTGAGGAAGCTGTTCCCTGCTTTGCTCTGTCCAAAAACGATTCTTATGTGATGTCAGCGTCGGGAGGGAAGATTTCT CTGTTCAATATGATGACATTTAAGACAATGGCAATGTTCAAGCCAGCACCACCTATGGCAACCTTTCTGGCTTTCCACCC TCAGGATAACAATATAATTGCTATAGGCATGGATGATTCTTCGATTCAGATATATAATGTTCGTATGGATCAGTTTAAAA GTAAACTCAAAGGTCATTCTAAAAGAATAACTGGTCTCGCTTTTTCGCATATACTGAATGTACTAGTTTCTTCTGGGGCA GATGCTCAGCTTTGTGTGTGGAATACCGATGGATGGGAAAAGCAGAAAACTCGGCTCTTACAACTTCCTGCTGGGAGGAC TCCACCGTCGCAGGCAGATACCCGTGTACAATTTCATCAGGATCAGGTCCGCTTCTTGGTTGTACATGAAACTCAGCTTG CAATTCATGAAGCAACTAAACTAGACTGTTTACACCAGTGGTTCCCAAGAGATTCTGCCGCACCAATATTGCATGCGACT TTCTCTTGTGATAGCCAGCTGATATTTGCCAGCTTTTTAGATGCAACAATCAGTGTATTCAGTGCTACAAACCTTAGATT ACAATGCCGGATCAATCCTTCTGCTTATCTTTCTGCAAGTGCCAGCAATGGTAATGTGCAACCCCTTGTAATTGCTGCAC ATCCACAAGAACCAAATCAATTTGCTGTAGGACTGTCAGATGGTGTTGTTCATGTCGTTGAACCCCTTGAGTCTGAAGGC AAGTGGGGTGTGCCTCCACCTAGTGAGAATGGGTCAGCAAGCAATGTAGCAGGGGCAGCTTCTTCAGTTAGAGCTTCTTC AGATGAAGCTCAGAGATAA
Protein sequence (LotjaGi3g1v0007100.7) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVQRYLSGFTKVDDNRYSMKIFFEIRKQK YLEALDKHDRSKAVEILAKDLKVFATFNEELFKEITQLLTLENFRENEQLSKYGDTKSARTIMLVELKKLIEANPLFRDK LQFPNLKNSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFVDHSCGQPNGARAPSPANNPLLGSLPKAGGFPPLGAHGPFQ TAPAPAPSPLAGWMSNPNPTTAAHAAVSGGPAIGLGGPSIPAALKHPRTPPTNPSVDYPSGDSDHVSKRTRSIGMSDEGN LPVNVLSATFPSHGHGQAFNAPDDLPKTVLRTLNQGSSTMSMDFHPVRQTLLLVGTNVGDIALWEVGSRERLVLRNFKVW DLSACSMSFQAALVKDPGVSVNRVWDAVSGTKQYTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDNMGSRVDY DAPGRWCSTMAYSADGSRLFSCGTSKDGESAIVEWNESEGAFKRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDM DNIQLLTTIDADGGLPASPRIRFNKDGSLLAVSANENGIKILSNEDGIRLLRSFENSMFDATRTSEAMTKPTINPISASA VAASSAAHSDRASFAVAITGMNGDARNLGDVKPRISDESNDKSKIWKLTEINEPSQCRSLKLPENQRVTKISRLIYTNSG NAILALASNAIHLLWKWQRSDRNSPAKASITVPPQLWQPSSGILMTNDINDNNHPEEAVPCFALSKNDSYVMSASGGKIS LFNMMTFKTMAMFKPAPPMATFLAFHPQDNNIIAIGMDDSSIQIYNVRMDQFKSKLKGHSKRITGLAFSHILNVLVSSGA DAQLCVWNTDGWEKQKTRLLQLPAGRTPPSQADTRVQFHQDQVRFLVVHETQLAIHEATKLDCLHQWFPRDSAAPILHAT FSCDSQLIFASFLDATISVFSATNLRLQCRINPSAYLSASASNGNVQPLVIAAHPQEPNQFAVGLSDGVVHVVEPLESEG KWGVPPPSENGSASNVAGAASSVRASSDEAQR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 424 | 424 | 0.0 | – | |
| PANTHER | 1 | 424 | 424 | 0.0 | ||
| ProSiteProfiles | 4 | 36 | 33 | 10.297 | ||
| SMART | 4 | 36 | 33 | 3.1E-5 | ||
| ProSiteProfiles | 34 | 92 | 59 | 13.366 | ||
| SMART | 34 | 92 | 59 | 1.1E-13 | ||
| MobiDBLite | 277 | 318 | 42 | - | – | |
| Gene3D | 343 | 505 | 163 | 6.9E-13 | ||
| SMART | 346 | 385 | 40 | 13.0 | ||
| ProSiteProfiles | 352 | 612 | 261 | 11.471 | ||
| PANTHER | 423 | 1072 | 650 | 0.0 | ||
| PANTHER | 423 | 1072 | 650 | 0.0 | – | |
| SUPERFAMILY | 424 | 893 | 470 | 6.36E-42 | ||
| SMART | 429 | 470 | 42 | 0.051 | ||
| SMART | 473 | 516 | 44 | 36.0 | ||
| Gene3D | 506 | 622 | 117 | 9.2E-10 | ||
| SMART | 519 | 559 | 41 | 0.76 | ||
| ProSiteProfiles | 537 | 568 | 32 | 8.971 | ||
| SMART | 562 | 603 | 42 | 220.0 | ||
| Gene3D | 755 | 1045 | 291 | 1.4E-26 | ||
| SMART | 765 | 803 | 39 | 75.0 | ||
| SMART | 806 | 846 | 41 | 15.0 | ||
| ProSiteProfiles | 813 | 897 | 85 | 14.002 | ||
| SUPERFAMILY | 818 | 1039 | 222 | 1.24E-10 | – | |
| SMART | 849 | 888 | 40 | 1.5E-5 | ||
| Pfam | 854 | 888 | 35 | 0.0062 | ||
| ProSiteProfiles | 856 | 897 | 42 | 11.879 | ||
| ProSitePatterns | 875 | 889 | 15 | - | ||
| SMART | 940 | 981 | 42 | 6.2 | ||
| SMART | 990 | 1034 | 45 | 240.0 | ||
| MobiDBLite | 1038 | 1072 | 35 | - | – | |
| MobiDBLite | 1048 | 1072 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi3g1v0007100.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…