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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0015600 |
| Transcript ID | LotjaGi3g1v0015600.2 |
| Related isoforms 8 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Coatomer subunit beta-like protein; TAIR: AT1G52360.3 Coatomer, beta' subunit; Swiss-Prot: sp|Q9C827|COB22_ARATH Coatomer subunit beta'-2; TrEMBL-Plants: tr|A0A072VDQ5|A0A072VDQ5_MEDTR Coatomer subunit beta-like protein; Found in the gene: LotjaGi3g1v0015600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:1643277..1652533) extracted from Lotus japonicus Gifu genome v1.2.
GGTTAGGCTATATTATTCTTGTTTTCTCTATCACAAGCTTTCTGTTTTAACTGAGTCATTACTAGTTTCAATGGAGATTT TGCTATTGTAATTAACTCTGATTTTGTTCATGCTGTTTCAGACCATGGCCAAATCTTTTGAGGTTACTGAGTTACCAGGT ACATGAGATTTTTAAGTCCATTTCTTCCTCTTGATACATTTTGCTTGGAGGCTTTTGATGCATTTGATTGAAGGCATAGT TTTATTGCATATTTCTTACTCTGGAAATCATTTGGCTCTTGTGCAACATGATTTTACAGTTAGATCAGCCAAGTTTGTTG CACGCAAACAGTGGGTTGTTGCTGGAGCAGATGATATGTTCATCCGTGTCTATAATTACAACACAATGGATAAAGTCAAA GTATTTGAAGCACATACAGACTACATTAGGTGTGTGGCAGTTCATCCTACCCTTCCTTATGTGCTATCATCATCTGATGA TATGCTCATTAAGCTTTGGGATTGGGAAAAGGGCTGGATTTGTACCCAGATATTTGAAGGACATTCTCATTATGTCATGC AAGTGACATTTAATCCTAAAGATACAAACACCTTTGCCAGTGCATCTCTTGATCGAACCATAAAGGTATATCTGTGTTCT TGTTGCCGGTTGTTTCCTTTTCTTTAATTATTTTTTCTATTCTTTTATGATATAATGCATTGATGCATCTGTTATCTTCT CTTTCCAGATCTGGAATCTTGGCTCTCCTGACCCTAATTTTACATTGGATGCCCATCAGAAAGGAGTGAATTGCGTTGAT TACTTTACAGGTGGTGATAAGCCTTATCTAATCACTGGTTCTGATGATCACACTGCAAAGGTATTGTTTCAATTTCAGTT TTCTTCTTCTTTTTTACTTGATTTATATGTTCGTGTGTGTGTGTGTATATATATATGTAGCAATAATGTTAACAAAACCA ATGAAACAGGTATGGGATTATCAGACCAAAAGTTGTGTCCAGACTCTAGATGGTCACACACACAATGTGTCTGCTGTATG CTTTCATCCTGAACTTCCTATAATCATTACTGGTTCTGAGGATGGTACAGTACGCATATGGCACTCGACAACTTACAGGT AATTTGAGATGCACAGATAACTGAGTTATGAGCTTTATTTTTATGTTTTTTCTGTTTGGCATATTCTGATGGAGACCAAA AGGAAACAACAGGAAAATATTGTATTATCAGAGAATAGACACTGAAATGAAAAAGGGTCACAGTAGACGATATCCTCCAC CTTCCTAGAGCCTATGGCTCCACAGATTCAAAATTCTCTGCCCAAAAGTAACTAAAACCACCATGTTGGTGAGTACCCAT TCCAGAAACTAACTTGCCGAGTCAGCAAATTATTTATGGTCTTCCCCATTCTGCCCTTATATTGGAATAAACCGTACAGG TTTTGGGGTTTTTGTTTGGACCATTATCAAGCTGACCTTGACTTTTAACTTCAAATTCAAGCCTAACATTCTAACACTGC CCCTTTGTATAATACAGCCTTGTCCTCACGTTAAAAAAAAACCTTGTCCTCAAGGCTGAATATTGGAAATTGACACCTGA TAGTGAACTCATGCTTCCTGAAAGGTTCTTGCCTTCCATCATTGACCTCTATGTCCATTCCCTCAGGCAGATGCTGCTTG ACTTGATTTTATCCCACTTCCATTTATTCGAGGAGACTTGTGACACATGCAACACTAGGTGGATTTTGGAAGTTACTGGA GTTGTAATTTTTAAGCCACTTTACCAACCTGTTCCACAATCTGAAATGGACCATAATACCTCAAATCACAGGATTGATTC TTCTGTCCACACAATTGTTGTTGATGTGTTCTGAGTTTCAAAAAGACCCATTCTCCAACTGTAAATGACTCCTCATGTCT GTGTTTGTCCCTCAATTTCTTCATCCTATTCCTTGCTCTCTCCAAATTATACTTTATTTTTTTTCCTTCTCCCTTTGTCA TCCACCCTTTTATTGTAACTTGAACTATCTGGCTGTGGTTGACTTTTGACCTTAAAGAATGAGGCCTTTTACTGACATGC CATTATGTTCTTTTGAATAATATTGTGGCTGATTTGTGACTTCTTCACTTTTTCTTTTCACAGTTTCATAAGTGCATCTA TGATCAGGAAGATTTATTCTGATGACTAATCGCTAAATTTTATTTAAATTTGAGATAACACTAATATTAAGTTTGAATTG TACAGTGTTGTTTGTCTCTTTCTATTTTATTTAGGTTATACTATCTTGGCATTTCATTACTTATTGTTTTCTCAATCTAC TTACAGGCTTGAGAACACATTGAACTACGGCCTTGAAAGAGTTTGGGCTATTGGATACTTGAAGAGTTCACGTCGGTGAG TTTTTTTTCAAATAAAACTTCTGCAATCAATTTCTTAGTCTTGTTATTTTGGGCCCTTGAATAACTGAGTAGAAACAGTG TCAAATTGTGCCTGAATAATGAAGTTTTCTTATCTTCACTCTTCTGTCATGACTTCAAAATAACCAATATAACCATCTTA CAGGGTTGTGATTGGCTATGACGAAGGAACAATTATGGTCAAACTTGGTCGAGAAGTACCTGTGGCTAGCATGGACAACA GTGGGAAAATTATTTGGGCTAAACATAATGAAATTCAGACTGTCAATATAAAGAGCATAGGAGTAGATGCGGAGGTATGG ACTCAATGTACCCTTTGCGGTATAATATGTGAGCAAGAAGTGTAAGGTTCTTTTTCTTTTAGTGACACATGCGAGTACTA TGCTTCTTAGGTTGCTGATGGAGAAAGGTTGCCTTTGGCTGTTAAGGAGTTGGGCACCTGTGATCTCTACCCCCAAGTGA GTCCATGTCATTCTTCTTAATTATTTTGCATTCTTTTGCTCAGCTTCTCTAATTCTTATCATTTCTACTCTCATTATGCA ATCATTGACAGATTACAGAAAAGTGGTATATGTGCATTATCTAGCATATCATTATCAGACATTTTGGTATATTCATGCTG ACTTCATTATGCAGTATTTGTCACATTTTTCTTGAACCCTGTCCAAATTTTATTTTATTTGTATGCAAAAAAGCTTGTCA TTGCATATAGGATTAAAGCGGCCAGCGAACCTTGACTTTTATGTTGAGTATATAATCGGGATATTGGTATAATTTTGCAA TGTTTGACGTTGAAATTCAAAATTAATTGCATGTACCTCTGTTTTCTTGTAGAACTTAGATATCTGAGGGAATATGACTA TTTAATGTTGCCAAATTACTGGGTAGTTCAGAACTATGTTTTGTAATCTCCAATCTATATCCAGAGAAGCAAGTTTTAAA ATGTTAGTCCTTGTTGCTGGTTCAAGCAATATTTATTTGATTCGTGTGTAATGGCTTGATGTTTAATTATATGCAGAATT TAAAGCACAATCCTAATGGGAGATTCGTTGTTGTATGTGGAGATGGTGAGTATATTATATACACCGCGTTGGCATGGAGA AATAGGTCATTTGGTTCAGCACTAGAATTTGTCTGGTCTACGGATGGAGAATATGCAGTCAGGGAAAGTACATCCAAGAT TAAAATTTTCAGCAAAAATTTCCAGGTTTGCACTTTTGTTAAACTTTATTTACTCGTTAATCTTGTATTTTGTCTGGTGA AAGTGGTGATGAGAACCAACAAATTGTAGCTTTTTCTCAAAAGGGTAAGCATAACTAGATCTTGCCATTCTTGTACTCTG TTATTGATAGCTCTCGGGGTAGACCTCCTATCACAAAGGTTTACCAGAGGAGCTGTAAAGAGAGTTGTTAGTCAGTTAGT GGTTAGAGTTGGTTAGTATAACTGACTATTAGTGGAGGGAAAGTTAGGATTCAAATGTATAAATAGGGGAAATGTTATTC AGTTAGTTCATTTTCTGGTTGTTAGTTGTTTGGAAGAGAGTGAGTCTCTCCAAATACTTACCTGTATCTGTTACACTCTG GTTCCTAAATTGGGAATTAGGGTTCCTTAACAATAATCTTTTCATTGTCACATCTGTCTTCTAAATGAAAAAATTTGCTC GTTGTGGATGTTTCAGGAAAAGAGGAGTGTCCGACCAACATTTTCAGCTGAACGAATATTTGGTGGTACTTTATTGGCAA TGTGCTCAAATGATTTCATCTGCTTTTATGAATGGGCTGAATGCAGGTTGATCTATCGCATTGATGTCAATGTGAAAGTG AGTGCTAGATTAGGTGACATCTATTTTTCTCTGCTTTTCTTTCCTTATATTCAGTGTTTAATTTAATTTTGTTAATTTTC TTTTGTCAGAACCTCTATTGGGCTGATAGCGGTGATCTAGTTACAATTGCTAGTGATACATCATTCTACATCCTGAAGTA CAACGTGAGGATTTTATGAACTTAATCATTTTCTTATAGTTGCTGCCTTGCTTTAGCTGTATGATTCTTTTGTAGACCTT TTCTGTTGAAGCACTGTAAATATTTTGACTTCCATTGTTGCAGCGTGATGTTGTTTCATCGCATTTAGATAGTGGAAGAC CCGTAGATGAGGAAGGTGTTGAAGATGCTTTTGAGCTCCTTCATGAAATGAATGAACGTGTCAGGACTGGCATCTGGGTT GGGGATTGCTTTATCTACAACAATTCCTCTTGGAGACTTAATTACTGTGTTGGTGGTGAGGTATTAACTTTTATCCCTTG TTTAAAATAAAAAGAACCGCATATTTTTTCTTGAAATACAAGGATCATATGAAACCTATTGATGCAACATTATGAATTCA GGTAACTACAATGTTCCATTTGGACCGCCCTATGTACTTGTTGGGATACCTTGCAAACCAAAGTCGGGTTTATTTGATTG ACAAAGAGTTTAAGTAAGTGGACTATTTGTTTGGATTATTTAGAGTCTCAAATTGCAGTAATTTGAACTATTTTTCTTTC TATTTATTTTCTTCTCAGTGTTATGGGATACACACTGCTTTTAAGCTTGATTGAATACAAAACACTTGTGATGCGTGGCG ATTTAGAAAGGGCCAGTGAAGTTCTACCATCAATCCCTAAAGATCATCATAACAGGTAGGAGCTACCTTGTGTTATATAA GAGAATGATTAATTTATTTTCGTTATGCCTAAAAAGCTTGTAGGGACAGAATTATGGTTCATAAAATTATGTACTGTGTA TCTAGATAATTATCATGGATTAGTATTCCCTCTCTATTTTATTTTTCTGTTTTGTGCAAGAAAGTCTGGTTTTGATATTT GAACCTGCTGAAAATGGCAGGGCATCTTTAGTGGCTGATCAGAGAATCTTTTGATACTCATAATTTTGTATGAATAACTA TTACATTTATTCTGGACTTTCCATTCTTCTTATTTGTCCATCAATGGTTTTCGATTGTCATGCTTTTATGATAATCTTGT ATGAATAAATATTGCACATTGATTTTCCTGTTACTTGTTTTAGATTTTACAATTTGTTCTATTGATCATATAGTGTTTAT TCAAACTTCGGGCTTCAGATCTAATGTTTTTCCATATGTTTACCATTATCTAATTGAAATTTTGATTTCATGGTAGTGTG GCTCGTTTCCTGGAATCACGAGGGATGATAGAAGATGCTCTTGAAGTAGCTACTGACCCGGACTATAGATTTGATCTAGC AATACAACTTGGAAGATTAGAGGTTGCAAAGGTGCGTGTTATGTCTACAAGGAGATATTGCATGGCTTGTGAATGTTAAC TTTGGTATCTAAATTTTTCATCTTTCTTTATGAATTTGACATGTCATTTTAACTCAATAGTATTCATTCTCTTCTCTTGC AGAGCATTGCAATAGAAGTGCAGAGTGAGTCAAAATGGAAGCAGTTGGGAGAGCTAGCTATGTCTACTGGAAAGGTGTTT TTCTTTATGATTTAAATCTCCAACTTTAGTGATTCATTTGACACTTAAAAGCTCAATTCCGTTCCTGCATGTCCAAATGT ATTAAAGTGAGTGCCTTGATGATGATATACTGCTGAATATCACCATGTGCACAGGATAGATATAGGCCTTATTGAAGCTT TTGAGATGCAAGACAGCAAGAGGCTACAGTTTAGTTATGGACAAATTAAGATTTTCTTGGTTGCATGTTAGAAGTTGTCT CAGGTGCTTTGAGTTGTAGATGCTGATTCTAGTGTATAGTTAGGATGTTAAGGTTTTCTTCTTTTTCATCATAATGAGTA ATGATTATGTAATCTGGTAGACTCAATATAATGATGATTCTATTTGAATATTCTCTTGTTCAATTGTAGCTCACTGTATT TTACATTCTTGCAGTTAGAAATGGCTGAGGAATGTTTAAAGCATGCAAAGGATTTGAGTGGATTATTACTGCTGTATTCT TCTTTAGGCGATGCTGAAGGAATATCAAATCTTGCAACCCTTGCTAAAGAGCAAGGGAAGAACAATGTCGCATTCCTGTG CTTATTTATGTTGGGTAAACTTGAAGACTGTCTTCAACTATTGGTAGAAAGGTAGTCTTCTAAAGTTGTTCTATTTTTCC ATTCTGTATCTTTCTGACATTAGTAGGGAGGGGAATGGACTGATTAGACTTCAATTAGATATAGAACTGAGTTATGCGTT TTGCAGCAATCGGATTCCAGAGGCAGCTTTAATGGCTAGATCATATCTCCCAAGTAAGGTCTCTGAGATTGTGGCAATTT GGAGGAAAGATCTCAACAAGGTAATTTCTGATTCAGATATATGGTATTATGATGGAACTTCCTGATATTTATTTTATGGG GCATGAGATCATGGAAATTCGGATCCTCTATTGCCCTAAAAAGAACTGTACTATTCTGCCGTTGAAAATCTAAGAGTAGG CACATTTTCAAGGTCTAAGATCCTTTTTTAGTTGAATTGAAAAAAAGATTCTCATTCCTGATCTGATATTGCGGTGATAG GAACTTCGATTCTGGTTCAGTTGCCTTCTTTTGGGCAGTGTTATATGTTGGTAAATGGGTTGTGGGTTATAGAGAGTCTA TTTGAGTGCAGGTTAATCCTAAAGCTGCTGAATCTTTGGCTGATCCTGAGGAATATCCAAATTTGTTTGAAGACTGGCAA GTCGCCCTTGCTGTTGAATCTAAAGCTATAGAAACAAGGTTAGTGTGGAAAATGCTTATTTTCTTGCACTTATATTACTG TTTTGATGGGTTAGTGTTAGTGTTCAGTGTTCACATGTCCAATAAATACTTACTAACTATAAGATCCTTTTTTAGGAATG TTTACCCTCCTGCAGAGCAGTACATCAGCCATGCTGACAAATCACATGTAACCCTTGTTGAAGCTTTCAGAAACATGCAG ATTGAAGAAGAGGAGCCTCTTGAGAATGGTGACTCGAATTATGAGGTATAATAAATTTAGGGAAAACACCACATACTAAA GGTTGCAAGAAATTCTCTTAAATTGTTTGTTTTTCTGCAATATAATAAACAATAACCTTAGTAGATTGTTGGTTGAGGTG TTAAAGTGTTTGTTTATTGTATTGTCCTCATGTTGCAGCAAACTAAACAAGATGAAGAGGACTACACAGAGGAACAAGAG GAACAGAATGACTACAATGAGGAACAGGAGGAACAGAATGGAGAGGAAGGAAGCCAAGAGGAGGCCGTTGTAGTGGATGC GGAATCAACAGATGGTGCAGTACTCGTCAATGGTAACGAGGCTGACGAAGAGTGGGGTACGAATAATGAAGGAGCCCCGT CAGCCTAAAAGCAATTAGTTGGGGTGGTGTGAAAATCGAAATTTTGTCTCTGGTGATTAATTGTTTCTGACGTGCCATCT CTAACTCGCGTTTGACAACTACCTCTTTTTACTATAATCACTTATGCCCCCCTCTCAGTCCTACCTATTCTATTTGCTTT CAATTTTTAGTATATCTGATACTTCACTGCAGTTAGGCTGTATATTTGGGAATCGGGGAGGAAATTTTCAAATGATGTCC TTTGTCTATAGTGAATAATTGACTAAATCTTATAACTATGTTTCCCCATGATTTTGGAGACTACTGGGCTTGGTAGTTTA TAATGTTTTGTTGCTCTTTGCACACTGGTCTCTAATTTGTTAACTTTAAATCTAGGAAATAACCAGCAAATGTTTCCTGC AAAATCTTGCTGTTGCATATCTTGATTTAAAATCACCTGTGAAATATGGTGTACATTATCTTCTTCTTAAAGTCGTGATG TACTGCCATTGATCTTCACTTTCTTGCTTCCTTTACTTTAAAATGTTGTTGATGCTTGGCTTTCTGTATTCTTTGAACAT CTTTTTGTTTTAATAGAACTGCTTGGATGGTTTATTTATGATGAGCTTGTGTATTCACTGTATTATTGACCTCAATTGTG GATGTCACCTCAATTAAGCTGTTTCCTTACTTAAATACTCATCTTTTGTTGACAGTGCTTGCACCACGTCACTAGGTCCC ATCAAGACACCCGGTTCCAGCTTTTGGGATACTAATCTGAGGTTAGAAGAACACTTACATATTGGCTTCAACATACTGGC CTTGCATTGACAAGTCTCCTTCATTTTATTGGGATGCTTGCATAAATAGCGTTGTTAATAAAGGACTGGGTCCGTGTTCT GTCATCTGCAGATATCTGGCACTGCATGTTTCTGGATTGTTGGTATGCATTGCCTAAGCATGATAATTTTCTAGTGTTAT CTGTTTCATTTTCCTTAAATTTGAAATGCAGGTCTCCTCCTGGGGGATATGAAGCGATTCTGCGGACTGGTTGACTGGTT GTTTCTGTTTCCTGGTGTTGTGGTTTTGTAGTGCCCTGAATTATCTAATTCTGCACGCCGTATAACAATATCCCTTAGGG TCAGTTACAATTTACTAGAATTTATATAGCACATTCTTTTGGGGCTTTACCCCAACATATTCGTACCATTGTGAATGTAG AAAAAACTGAACTAGAAATGGTTGCCTGCTTAAATTTTAGATAGTTTTTTTTTTTCTTGGCCATATTTTTGAACATCTTT ATGTTTTCGTGGATTGTAAACATGGATGGTTAATAGAGAAAATAATGATTTCTTCCCCCAATGTTGCTTCTCTAAACTGA TTATTCCTCCTGTTGACCTAAAAAAACAGATTATTCCTCCAAATAAATCACAACAATTCTCATTTTAAGTTCATGAGCTT TGTATGAGTCTTTCCCTTTCAGAGTAAGTTCGCCCTCCATCGATTAGCAGTCCTAAC
CDS sequence (LotjaGi3g1v0015600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAAATCTTTTGAGGTTACTGAGTTACCAGTTAGATCAGCCAAGTTTGTTGCACGCAAACAGTGGGTTGTTGCTGG AGCAGATGATATGTTCATCCGTGTCTATAATTACAACACAATGGATAAAGTCAAAGTATTTGAAGCACATACAGACTACA TTAGGTGTGTGGCAGTTCATCCTACCCTTCCTTATGTGCTATCATCATCTGATGATATGCTCATTAAGCTTTGGGATTGG GAAAAGGGCTGGATTTGTACCCAGATATTTGAAGGACATTCTCATTATGTCATGCAAGTGACATTTAATCCTAAAGATAC AAACACCTTTGCCAGTGCATCTCTTGATCGAACCATAAAGATCTGGAATCTTGGCTCTCCTGACCCTAATTTTACATTGG ATGCCCATCAGAAAGGAGTGAATTGCGTTGATTACTTTACAGGTGGTGATAAGCCTTATCTAATCACTGGTTCTGATGAT CACACTGCAAAGGTATGGGATTATCAGACCAAAAGTTGTGTCCAGACTCTAGATGGTCACACACACAATGTGTCTGCTGT ATGCTTTCATCCTGAACTTCCTATAATCATTACTGGTTCTGAGGATGGTACAGTACGCATATGGCACTCGACAACTTACA GGCTTGAGAACACATTGAACTACGGCCTTGAAAGAGTTTGGGCTATTGGATACTTGAAGAGTTCACGTCGGGTTGTGATT GGCTATGACGAAGGAACAATTATGGTCAAACTTGGTCGAGAAGTACCTGTGGCTAGCATGGACAACAGTGGGAAAATTAT TTGGGCTAAACATAATGAAATTCAGACTGTCAATATAAAGAGCATAGGAGTAGATGCGGAGGTTGCTGATGGAGAAAGGT TGCCTTTGGCTGTTAAGGAGTTGGGCACCTGTGATCTCTACCCCCAAAATTTAAAGCACAATCCTAATGGGAGATTCGTT GTTGTATGTGGAGATGGTGAGTATATTATATACACCGCGTTGGCATGGAGAAATAGGTCATTTGGTTCAGCACTAGAATT TGTCTGGTCTACGGATGGAGAATATGCAGTCAGGGAAAGTACATCCAAGATTAAAATTTTCAGCAAAAATTTCCAGGAAA AGAGGAGTGTCCGACCAACATTTTCAGCTGAACGAATATTTGGTGGTACTTTATTGGCAATGTGCTCAAATGATTTCATC TGCTTTTATGAATGGGCTGAATGCAGGTTGATCTATCGCATTGATGTCAATGTGAAAAACCTCTATTGGGCTGATAGCGG TGATCTAGTTACAATTGCTAGTGATACATCATTCTACATCCTGAAGTACAACCGTGATGTTGTTTCATCGCATTTAGATA GTGGAAGACCCGTAGATGAGGAAGGTGTTGAAGATGCTTTTGAGCTCCTTCATGAAATGAATGAACGTGTCAGGACTGGC ATCTGGGTTGGGGATTGCTTTATCTACAACAATTCCTCTTGGAGACTTAATTACTGTGTTGGTGGTGAGGTAACTACAAT GTTCCATTTGGACCGCCCTATGTACTTGTTGGGATACCTTGCAAACCAAAGTCGGGTTTATTTGATTGACAAAGAGTTTA ATGTTATGGGATACACACTGCTTTTAAGCTTGATTGAATACAAAACACTTGTGATGCGTGGCGATTTAGAAAGGGCCAGT GAAGTTCTACCATCAATCCCTAAAGATCATCATAACAGTGTGGCTCGTTTCCTGGAATCACGAGGGATGATAGAAGATGC TCTTGAAGTAGCTACTGACCCGGACTATAGATTTGATCTAGCAATACAACTTGGAAGATTAGAGGTTGCAAAGAGCATTG CAATAGAAGTGCAGAGTGAGTCAAAATGGAAGCAGTTGGGAGAGCTAGCTATGTCTACTGGAAAGTTAGAAATGGCTGAG GAATGTTTAAAGCATGCAAAGGATTTGAGTGGATTATTACTGCTGTATTCTTCTTTAGGCGATGCTGAAGGAATATCAAA TCTTGCAACCCTTGCTAAAGAGCAAGGGAAGAACAATGTCGCATTCCTGTGCTTATTTATGTTGGGTAAACTTGAAGACT GTCTTCAACTATTGGTAGAAAGCAATCGGATTCCAGAGGCAGCTTTAATGGCTAGATCATATCTCCCAAGTAAGGTCTCT GAGATTGTGGCAATTTGGAGGAAAGATCTCAACAAGGTTAATCCTAAAGCTGCTGAATCTTTGGCTGATCCTGAGGAATA TCCAAATTTGTTTGAAGACTGGCAAGTCGCCCTTGCTGTTGAATCTAAAGCTATAGAAACAAGGAATGTTTACCCTCCTG CAGAGCAGTACATCAGCCATGCTGACAAATCACATGTAACCCTTGTTGAAGCTTTCAGAAACATGCAGATTGAAGAAGAG GAGCCTCTTGAGAATGGTGACTCGAATTATGAGCAAACTAAACAAGATGAAGAGGACTACACAGAGGAACAAGAGGAACA GAATGACTACAATGAGGAACAGGAGGAACAGAATGGAGAGGAAGGAAGCCAAGAGGAGGCCGTTGTAGTGGATGCGGAAT CAACAGATGGTGCAGTACTCGTCAATGGTAACGAGGCTGACGAAGAGTGGGTGCTTGCACCACGTCACTAG
Protein sequence (LotjaGi3g1v0015600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW EKGWICTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDD HTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYLKSSRRVVI GYDEGTIMVKLGREVPVASMDNSGKIIWAKHNEIQTVNIKSIGVDAEVADGERLPLAVKELGTCDLYPQNLKHNPNGRFV VVCGDGEYIIYTALAWRNRSFGSALEFVWSTDGEYAVRESTSKIKIFSKNFQEKRSVRPTFSAERIFGGTLLAMCSNDFI CFYEWAECRLIYRIDVNVKNLYWADSGDLVTIASDTSFYILKYNRDVVSSHLDSGRPVDEEGVEDAFELLHEMNERVRTG IWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERAS EVLPSIPKDHHNSVARFLESRGMIEDALEVATDPDYRFDLAIQLGRLEVAKSIAIEVQSESKWKQLGELAMSTGKLEMAE ECLKHAKDLSGLLLLYSSLGDAEGISNLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVS EIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVESKAIETRNVYPPAEQYISHADKSHVTLVEAFRNMQIEEE EPLENGDSNYEQTKQDEEDYTEEQEEQNDYNEEQEEQNGEEGSQEEAVVVDAESTDGAVLVNGNEADEEWVLAPRH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 862 | 862 | 0.0 | – | |
| PANTHER | 1 | 862 | 862 | 0.0 | – | |
| PIRSF | 1 | 846 | 846 | 0.0 | ||
| Gene3D | 1 | 252 | 252 | 8.5E-101 | ||
| SMART | 3 | 37 | 35 | 47.0 | ||
| ProSiteProfiles | 5 | 218 | 214 | 45.137 | ||
| SUPERFAMILY | 5 | 249 | 245 | 8.99E-68 | ||
| CDD | 9 | 249 | 241 | 3.85522E-60 | – | |
| SMART | 40 | 79 | 40 | 8.5E-9 | ||
| Pfam | 43 | 79 | 37 | 6.9E-6 | ||
| ProSiteProfiles | 47 | 79 | 33 | 12.747 | ||
| SMART | 83 | 123 | 41 | 5.3E-9 | ||
| Pfam | 86 | 123 | 38 | 2.0E-4 | ||
| ProSiteProfiles | 90 | 132 | 43 | 13.65 | ||
| PRINTS | 110 | 124 | 15 | 1.4E-6 | ||
| SMART | 126 | 167 | 42 | 1.1E-7 | ||
| Pfam | 129 | 167 | 39 | 4.3E-6 | ||
| ProSiteProfiles | 133 | 176 | 44 | 12.514 | ||
| PRINTS | 154 | 168 | 15 | 1.4E-6 | ||
| SMART | 170 | 209 | 40 | 5.1E-12 | ||
| Pfam | 172 | 208 | 37 | 8.1E-9 | ||
| ProSiteProfiles | 177 | 218 | 42 | 15.789 | ||
| SUPERFAMILY | 179 | 446 | 268 | 4.58E-17 | ||
| PRINTS | 196 | 210 | 15 | 1.4E-6 | ||
| Pfam | 271 | 715 | 445 | 1.1E-164 | ||
| Gene3D | 542 | 750 | 209 | 4.9E-87 | – | |
| MobiDBLite | 798 | 876 | 79 | - | – | |
| Coils | 813 | 840 | 28 | - | – | |
| MobiDBLite | 816 | 842 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Structural molecule activity | The action of a molecule that contributes to the structural integrity of a complex or its assembly within or outside a cell. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. | ||
| Cellular component | Membrane coat | Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules. |
Expression pattern of LotjaGi3g1v0015600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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