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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0015600 |
| Transcript ID | LotjaGi3g1v0015600.6 |
| Related isoforms 8 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Coatomer subunit beta-like protein; TAIR: AT1G52360.1 Coatomer, beta' subunit; Swiss-Prot: sp|Q9C827|COB22_ARATH Coatomer subunit beta'-2; TrEMBL-Plants: tr|A0A072VC11|A0A072VC11_MEDTR Coatomer subunit beta-like protein; Found in the gene: LotjaGi3g1v0015600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:1644766..1653642) extracted from Lotus japonicus Gifu genome v1.2.
CAGCCTCTCAGACTCGAAATCAAGGTACTGTAGCTCTTCCGATTTCAATTTCAATGTTCATTTGTGTTTCATAGTTTTGT AGTGTGGTTGTTTCATAGATTTCTCACGTTTTCTGGCTACTTAAGCTAACGTGTATTTTCCTAAATCCTGATATTTAATC AGCGAAAGCTTGCGCAAAGATCAGAGAGAGTCAAATGTGTGGATCTGCATCCAACAGAGCCATGGTAATGCTTTGCTTCG TTACATTGTTTGTTTGAAATTCAATTGTGATATGAAACTAGTTTTATAAATGTGAATATCTGCAACTGTTTTAATCGCCG GTGCGATTTTCTTCGCGCGTGCCTGGATTTTAGTCACTGATAGCGGTGTTTGCAATACTTGATGATAATGCAGGATTCTG GCGAGTTTATACTCTGGAACTGTGTGTATCTGGAATTACCAATCTCAGGTATGGAAATTCTCTTTAATCTTGAGATGTGT TGTGTACTGTTATAAATGAATTTCATCCAAATGAGAAATGCAATGGTTGATAGTTGATACCTATATGTTGGCATTTAAGT CAGACACGGGTGTTTGTTGATTGATCTTCAAACAAGCCACCTTTTGCATGGTGCCTATATATTATGAGCTGCTGGTTCAC AATGAAGAGACCTTTTACTCATGGTTTTCTTCAAATTTCGAGCAGCTATATGGTTGATTTAACATATTGTTTGAATTAAT GGCTGAATGCACGGAGCAAATATTGAAAAAGATTAACAAGACATTTGTAGTTGTTGTTTTAAATGGTTCATTTAGTAGTC TTCTGGAGATAGTTCATTAGTCCAAATATGTAGGGCTGCGAAATGTCCCGTCCCCCCTCAAACTGTCCATAGAAAGGCTA TTAAAATAGAATTTTACAGTTGCAGAGTCTGTGTATTGGGGTAGATTTCATATTCAATTATGTTCTCGTGAATCTTTTAA ATGTCTTTATACTTTTGTCAGTTGAGCTGTTTAGGCACATTGCATTGATAAAGTTTGAGCAATTTTAGATAGTTCAATCA CCATTTGGCGTAGATTTTTTTTTAACTTTTGTTGTTGACCTTGTACATTCTGCAAGCTGTAGTGTACTGGGTTAGGCTAT ATTATTCTTGTTTTCTCTATCACAAGCTTTCTGTTTTAACTGAGTCATTACTAGTTTCAATGGAGATTTTGCTATTGTAA TTAACTCTGATTTTGTTCATGCTGTTTCAGACCATGGCCAAATCTTTTGAGGTTACTGAGTTACCAGGTACATGAGATTT TTAAGTCCATTTCTTCCTCTTGATACATTTTGCTTGGAGGCTTTTGATGCATTTGATTGAAGGCATAGTTTTATTGCATA TTTCTTACTCTGGAAATCATTTGGCTCTTGTGCAACATGATTTTACAGTTAGATCAGCCAAGTTTGTTGCACGCAAACAG TGGGTTGTTGCTGGAGCAGATGATATGTTCATCCGTGTCTATAATTACAACACAATGGATAAAGTCAAAGTATTTGAAGC ACATACAGACTACATTAGGTGTGTGGCAGTTCATCCTACCCTTCCTTATGTGCTATCATCATCTGATGATATGCTCATTA AGCTTTGGGATTGGGAAAAGGGCTGGATTTGTACCCAGATATTTGAAGGACATTCTCATTATGTCATGCAAGTGACATTT AATCCTAAAGATACAAACACCTTTGCCAGTGCATCTCTTGATCGAACCATAAAGGTATATCTGTGTTCTTGTTGCCGGTT GTTTCCTTTTCTTTAATTATTTTTTCTATTCTTTTATGATATAATGCATTGATGCATCTGTTATCTTCTCTTTCCAGATC TGGAATCTTGGCTCTCCTGACCCTAATTTTACATTGGATGCCCATCAGAAAGGAGTGAATTGCGTTGATTACTTTACAGG TGGTGATAAGCCTTATCTAATCACTGGTTCTGATGATCACACTGCAAAGGTATTGTTTCAATTTCAGTTTTCTTCTTCTT TTTTACTTGATTTATATGTTCGTGTGTGTGTGTGTATATATATATGTAGCAATAATGTTAACAAAACCAATGAAACAGGT ATGGGATTATCAGACCAAAAGTTGTGTCCAGACTCTAGATGGTCACACACACAATGTGTCTGCTGTATGCTTTCATCCTG AACTTCCTATAATCATTACTGGTTCTGAGGATGGTACAGTACGCATATGGCACTCGACAACTTACAGGTAATTTGAGATG CACAGATAACTGAGTTATGAGCTTTATTTTTATGTTTTTTCTGTTTGGCATATTCTGATGGAGACCAAAAGGAAACAACA GGAAAATATTGTATTATCAGAGAATAGACACTGAAATGAAAAAGGGTCACAGTAGACGATATCCTCCACCTTCCTAGAGC CTATGGCTCCACAGATTCAAAATTCTCTGCCCAAAAGTAACTAAAACCACCATGTTGGTGAGTACCCATTCCAGAAACTA ACTTGCCGAGTCAGCAAATTATTTATGGTCTTCCCCATTCTGCCCTTATATTGGAATAAACCGTACAGGTTTTGGGGTTT TTGTTTGGACCATTATCAAGCTGACCTTGACTTTTAACTTCAAATTCAAGCCTAACATTCTAACACTGCCCCTTTGTATA ATACAGCCTTGTCCTCACGTTAAAAAAAAACCTTGTCCTCAAGGCTGAATATTGGAAATTGACACCTGATAGTGAACTCA TGCTTCCTGAAAGGTTCTTGCCTTCCATCATTGACCTCTATGTCCATTCCCTCAGGCAGATGCTGCTTGACTTGATTTTA TCCCACTTCCATTTATTCGAGGAGACTTGTGACACATGCAACACTAGGTGGATTTTGGAAGTTACTGGAGTTGTAATTTT TAAGCCACTTTACCAACCTGTTCCACAATCTGAAATGGACCATAATACCTCAAATCACAGGATTGATTCTTCTGTCCACA CAATTGTTGTTGATGTGTTCTGAGTTTCAAAAAGACCCATTCTCCAACTGTAAATGACTCCTCATGTCTGTGTTTGTCCC TCAATTTCTTCATCCTATTCCTTGCTCTCTCCAAATTATACTTTATTTTTTTTCCTTCTCCCTTTGTCATCCACCCTTTT ATTGTAACTTGAACTATCTGGCTGTGGTTGACTTTTGACCTTAAAGAATGAGGCCTTTTACTGACATGCCATTATGTTCT TTTGAATAATATTGTGGCTGATTTGTGACTTCTTCACTTTTTCTTTTCACAGTTTCATAAGTGCATCTATGATCAGGAAG ATTTATTCTGATGACTAATCGCTAAATTTTATTTAAATTTGAGATAACACTAATATTAAGTTTGAATTGTACAGTGTTGT TTGTCTCTTTCTATTTTATTTAGGTTATACTATCTTGGCATTTCATTACTTATTGTTTTCTCAATCTACTTACAGGCTTG AGAACACATTGAACTACGGCCTTGAAAGAGTTTGGGCTATTGGATACTTGAAGAGTTCACGTCGGTGAGTTTTTTTTCAA ATAAAACTTCTGCAATCAATTTCTTAGTCTTGTTATTTTGGGCCCTTGAATAACTGAGTAGAAACAGTGTCAAATTGTGC CTGAATAATGAAGTTTTCTTATCTTCACTCTTCTGTCATGACTTCAAAATAACCAATATAACCATCTTACAGGGTTGTGA TTGGCTATGACGAAGGAACAATTATGGTCAAACTTGGTCGAGAAGTACCTGTGGCTAGCATGGACAACAGTGGGAAAATT ATTTGGGCTAAACATAATGAAATTCAGACTGTCAATATAAAGAGCATAGGAGTAGATGCGGAGGTATGGACTCAATGTAC CCTTTGCGGTATAATATGTGAGCAAGAAGTGTAAGGTTCTTTTTCTTTTAGTGACACATGCGAGTACTATGCTTCTTAGG TTGCTGATGGAGAAAGGTTGCCTTTGGCTGTTAAGGAGTTGGGCACCTGTGATCTCTACCCCCAAGTGAGTCCATGTCAT TCTTCTTAATTATTTTGCATTCTTTTGCTCAGCTTCTCTAATTCTTATCATTTCTACTCTCATTATGCAATCATTGACAG ATTACAGAAAAGTGGTATATGTGCATTATCTAGCATATCATTATCAGACATTTTGGTATATTCATGCTGACTTCATTATG CAGTATTTGTCACATTTTTCTTGAACCCTGTCCAAATTTTATTTTATTTGTATGCAAAAAAGCTTGTCATTGCATATAGG ATTAAAGCGGCCAGCGAACCTTGACTTTTATGTTGAGTATATAATCGGGATATTGGTATAATTTTGCAATGTTTGACGTT GAAATTCAAAATTAATTGCATGTACCTCTGTTTTCTTGTAGAACTTAGATATCTGAGGGAATATGACTATTTAATGTTGC CAAATTACTGGGTAGTTCAGAACTATGTTTTGTAATCTCCAATCTATATCCAGAGAAGCAAGTTTTAAAATGTTAGTCCT TGTTGCTGGTTCAAGCAATATTTATTTGATTCGTGTGTAATGGCTTGATGTTTAATTATATGCAGAATTTAAAGCACAAT CCTAATGGGAGATTCGTTGTTGTATGTGGAGATGGTGAGTATATTATATACACCGCGTTGGCATGGAGAAATAGGTCATT TGGTTCAGCACTAGAATTTGTCTGGTCTACGGATGGAGAATATGCAGTCAGGGAAAGTACATCCAAGATTAAAATTTTCA GCAAAAATTTCCAGGTTTGCACTTTTGTTAAACTTTATTTACTCGTTAATCTTGTATTTTGTCTGGTGAAAGTGGTGATG AGAACCAACAAATTGTAGCTTTTTCTCAAAAGGGTAAGCATAACTAGATCTTGCCATTCTTGTACTCTGTTATTGATAGC TCTCGGGGTAGACCTCCTATCACAAAGGTTTACCAGAGGAGCTGTAAAGAGAGTTGTTAGTCAGTTAGTGGTTAGAGTTG GTTAGTATAACTGACTATTAGTGGAGGGAAAGTTAGGATTCAAATGTATAAATAGGGGAAATGTTATTCAGTTAGTTCAT TTTCTGGTTGTTAGTTGTTTGGAAGAGAGTGAGTCTCTCCAAATACTTACCTGTATCTGTTACACTCTGGTTCCTAAATT GGGAATTAGGGTTCCTTAACAATAATCTTTTCATTGTCACATCTGTCTTCTAAATGAAAAAATTTGCTCGTTGTGGATGT TTCAGGAAAAGAGGAGTGTCCGACCAACATTTTCAGCTGAACGAATATTTGGTGGTACTTTATTGGCAATGTGCTCAAAT GATTTCATCTGCTTTTATGAATGGGCTGAATGCAGGTTGATCTATCGCATTGATGTCAATGTGAAAGTGAGTGCTAGATT AGGTGACATCTATTTTTCTCTGCTTTTCTTTCCTTATATTCAGTGTTTAATTTAATTTTGTTAATTTTCTTTTGTCAGAA CCTCTATTGGGCTGATAGCGGTGATCTAGTTACAATTGCTAGTGATACATCATTCTACATCCTGAAGTACAACGTGAGGA TTTTATGAACTTAATCATTTTCTTATAGTTGCTGCCTTGCTTTAGCTGTATGATTCTTTTGTAGACCTTTTCTGTTGAAG CACTGTAAATATTTTGACTTCCATTGTTGCAGCGTGATGTTGTTTCATCGCATTTAGATAGTGGAAGACCCGTAGATGAG GAAGGTGTTGAAGATGCTTTTGAGCTCCTTCATGAAATGAATGAACGTGTCAGGACTGGCATCTGGGTTGGGGATTGCTT TATCTACAACAATTCCTCTTGGAGACTTAATTACTGTGTTGGTGGTGAGGTATTAACTTTTATCCCTTGTTTAAAATAAA AAGAACCGCATATTTTTTCTTGAAATACAAGGATCATATGAAACCTATTGATGCAACATTATGAATTCAGGTAACTACAA TGTTCCATTTGGACCGCCCTATGTACTTGTTGGGATACCTTGCAAACCAAAGTCGGGTTTATTTGATTGACAAAGAGTTT AAGTAAGTGGACTATTTGTTTGGATTATTTAGAGTCTCAAATTGCAGTAATTTGAACTATTTTTCTTTCTATTTATTTTC TTCTCAGTGTTATGGGATACACACTGCTTTTAAGCTTGATTGAATACAAAACACTTGTGATGCGTGGCGATTTAGAAAGG GCCAGTGAAGTTCTACCATCAATCCCTAAAGATCATCATAACAGGTAGGAGCTACCTTGTGTTATATAAGAGAATGATTA ATTTATTTTCGTTATGCCTAAAAAGCTTGTAGGGACAGAATTATGGTTCATAAAATTATGTACTGTGTATCTAGATAATT ATCATGGATTAGTATTCCCTCTCTATTTTATTTTTCTGTTTTGTGCAAGAAAGTCTGGTTTTGATATTTGAACCTGCTGA AAATGGCAGGGCATCTTTAGTGGCTGATCAGAGAATCTTTTGATACTCATAATTTTGTATGAATAACTATTACATTTATT CTGGACTTTCCATTCTTCTTATTTGTCCATCAATGGTTTTCGATTGTCATGCTTTTATGATAATCTTGTATGAATAAATA TTGCACATTGATTTTCCTGTTACTTGTTTTAGATTTTACAATTTGTTCTATTGATCATATAGTGTTTATTCAAACTTCGG GCTTCAGATCTAATGTTTTTCCATATGTTTACCATTATCTAATTGAAATTTTGATTTCATGGTAGTGTGGCTCGTTTCCT GGAATCACGAGGGATGATAGAAGATGCTCTTGAAGTAGCTACTGACCCGGACTATAGATTTGATCTAGCAATACAACTTG GAAGATTAGAGGTTGCAAAGGTGCGTGTTATGTCTACAAGGAGATATTGCATGGCTTGTGAATGTTAACTTTGGTATCTA AATTTTTCATCTTTCTTTATGAATTTGACATGTCATTTTAACTCAATAGTATTCATTCTCTTCTCTTGCAGAGCATTGCA ATAGAAGTGCAGAGTGAGTCAAAATGGAAGCAGTTGGGAGAGCTAGCTATGTCTACTGGAAAGGTGTTTTTCTTTATGAT TTAAATCTCCAACTTTAGTGATTCATTTGACACTTAAAAGCTCAATTCCGTTCCTGCATGTCCAAATGTATTAAAGTGAG TGCCTTGATGATGATATACTGCTGAATATCACCATGTGCACAGGATAGATATAGGCCTTATTGAAGCTTTTGAGATGCAA GACAGCAAGAGGCTACAGTTTAGTTATGGACAAATTAAGATTTTCTTGGTTGCATGTTAGAAGTTGTCTCAGGTGCTTTG AGTTGTAGATGCTGATTCTAGTGTATAGTTAGGATGTTAAGGTTTTCTTCTTTTTCATCATAATGAGTAATGATTATGTA ATCTGGTAGACTCAATATAATGATGATTCTATTTGAATATTCTCTTGTTCAATTGTAGCTCACTGTATTTTACATTCTTG CAGTTAGAAATGGCTGAGGAATGTTTAAAGCATGCAAAGGATTTGAGTGGATTATTACTGCTGTATTCTTCTTTAGGCGA TGCTGAAGGAATATCAAATCTTGCAACCCTTGCTAAAGAGCAAGGGAAGAACAATGTCGCATTCCTGTGCTTATTTATGT TGGGTAAACTTGAAGACTGTCTTCAACTATTGGTAGAAAGGTAGTCTTCTAAAGTTGTTCTATTTTTCCATTCTGTATCT TTCTGACATTAGTAGGGAGGGGAATGGACTGATTAGACTTCAATTAGATATAGAACTGAGTTATGCGTTTTGCAGCAATC GGATTCCAGAGGCAGCTTTAATGGCTAGATCATATCTCCCAAGTAAGGTCTCTGAGATTGTGGCAATTTGGAGGAAAGAT CTCAACAAGGTAATTTCTGATTCAGATATATGGTATTATGATGGAACTTCCTGATATTTATTTTATGGGGCATGAGATCA TGGAAATTCGGATCCTCTATTGCCCTAAAAAGAACTGTACTATTCTGCCGTTGAAAATCTAAGAGTAGGCACATTTTCAA GGTCTAAGATCCTTTTTTAGTTGAATTGAAAAAAAGATTCTCATTCCTGATCTGATATTGCGGTGATAGGAACTTCGATT CTGGTTCAGTTGCCTTCTTTTGGGCAGTGTTATATGTTGGTAAATGGGTTGTGGGTTATAGAGAGTCTATTTGAGTGCAG GTTAATCCTAAAGCTGCTGAATCTTTGGCTGATCCTGAGGAATATCCAAATTTGTTTGAAGACTGGCAAGTCGCCCTTGC TGTTGAATCTAAAGCTATAGAAACAAGGTTAGTGTGGAAAATGCTTATTTTCTTGCACTTATATTACTGTTTTGATGGGT TAGTGTTAGTGTTCAGTGTTCACATGTCCAATAAATACTTACTAACTATAAGATCCTTTTTTAGGAATGTTTACCCTCCT GCAGAGCAGTACATCAGCCATGCTGACAAATCACATGTAACCCTTGTTGAAGCTTTCAGAAACATGCAGATTGAAGAAGA GGAGCCTCTTGAGAATGGTGACTCGAATTATGAGGTATAATAAATTTAGGGAAAACACCACATACTAAAGGTTGCAAGAA ATTCTCTTAAATTGTTTGTTTTTCTGCAATATAATAAACAATAACCTTAGTAGATTGTTGGTTGAGGTGTTAAAGTGTTT GTTTATTGTATTGTCCTCATGTTGCAGCAAACTAAACAAGATGAAGAGGACTACACAGAGGAACAAGAGGAACAGAATGA CTACAATGAGGAACAGGAGGAACAGAATGGAGAGGAAGGAAGCCAAGAGGAGGCCGTTGTAGTGGATGCGGAATCAACAG ATGGTGCAGTACTCGTCAATGGTAACGAGGCTGACGAAGAGTGGGGTACGAATAATGAAGGAGCCCCGTCAGCCTAA
CDS sequence (LotjaGi3g1v0015600.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAAATCTTTTGAGGTTACTGAGTTACCAGTTAGATCAGCCAAGTTTGTTGCACGCAAACAGTGGGTTGTTGCTGG AGCAGATGATATGTTCATCCGTGTCTATAATTACAACACAATGGATAAAGTCAAAGTATTTGAAGCACATACAGACTACA TTAGGTGTGTGGCAGTTCATCCTACCCTTCCTTATGTGCTATCATCATCTGATGATATGCTCATTAAGCTTTGGGATTGG GAAAAGGGCTGGATTTGTACCCAGATATTTGAAGGACATTCTCATTATGTCATGCAAGTGACATTTAATCCTAAAGATAC AAACACCTTTGCCAGTGCATCTCTTGATCGAACCATAAAGATCTGGAATCTTGGCTCTCCTGACCCTAATTTTACATTGG ATGCCCATCAGAAAGGAGTGAATTGCGTTGATTACTTTACAGGTGGTGATAAGCCTTATCTAATCACTGGTTCTGATGAT CACACTGCAAAGGTATGGGATTATCAGACCAAAAGTTGTGTCCAGACTCTAGATGGTCACACACACAATGTGTCTGCTGT ATGCTTTCATCCTGAACTTCCTATAATCATTACTGGTTCTGAGGATGGTACAGTACGCATATGGCACTCGACAACTTACA GGCTTGAGAACACATTGAACTACGGCCTTGAAAGAGTTTGGGCTATTGGATACTTGAAGAGTTCACGTCGGGTTGTGATT GGCTATGACGAAGGAACAATTATGGTCAAACTTGGTCGAGAAGTACCTGTGGCTAGCATGGACAACAGTGGGAAAATTAT TTGGGCTAAACATAATGAAATTCAGACTGTCAATATAAAGAGCATAGGAGTAGATGCGGAGGTTGCTGATGGAGAAAGGT TGCCTTTGGCTGTTAAGGAGTTGGGCACCTGTGATCTCTACCCCCAAAATTTAAAGCACAATCCTAATGGGAGATTCGTT GTTGTATGTGGAGATGGTGAGTATATTATATACACCGCGTTGGCATGGAGAAATAGGTCATTTGGTTCAGCACTAGAATT TGTCTGGTCTACGGATGGAGAATATGCAGTCAGGGAAAGTACATCCAAGATTAAAATTTTCAGCAAAAATTTCCAGGAAA AGAGGAGTGTCCGACCAACATTTTCAGCTGAACGAATATTTGGTGGTACTTTATTGGCAATGTGCTCAAATGATTTCATC TGCTTTTATGAATGGGCTGAATGCAGGTTGATCTATCGCATTGATGTCAATGTGAAAAACCTCTATTGGGCTGATAGCGG TGATCTAGTTACAATTGCTAGTGATACATCATTCTACATCCTGAAGTACAACCGTGATGTTGTTTCATCGCATTTAGATA GTGGAAGACCCGTAGATGAGGAAGGTGTTGAAGATGCTTTTGAGCTCCTTCATGAAATGAATGAACGTGTCAGGACTGGC ATCTGGGTTGGGGATTGCTTTATCTACAACAATTCCTCTTGGAGACTTAATTACTGTGTTGGTGGTGAGGTAACTACAAT GTTCCATTTGGACCGCCCTATGTACTTGTTGGGATACCTTGCAAACCAAAGTCGGGTTTATTTGATTGACAAAGAGTTTA ATGTTATGGGATACACACTGCTTTTAAGCTTGATTGAATACAAAACACTTGTGATGCGTGGCGATTTAGAAAGGGCCAGT GAAGTTCTACCATCAATCCCTAAAGATCATCATAACAGTGTGGCTCGTTTCCTGGAATCACGAGGGATGATAGAAGATGC TCTTGAAGTAGCTACTGACCCGGACTATAGATTTGATCTAGCAATACAACTTGGAAGATTAGAGGTTGCAAAGAGCATTG CAATAGAAGTGCAGAGTGAGTCAAAATGGAAGCAGTTGGGAGAGCTAGCTATGTCTACTGGAAAGTTAGAAATGGCTGAG GAATGTTTAAAGCATGCAAAGGATTTGAGTGGATTATTACTGCTGTATTCTTCTTTAGGCGATGCTGAAGGAATATCAAA TCTTGCAACCCTTGCTAAAGAGCAAGGGAAGAACAATGTCGCATTCCTGTGCTTATTTATGTTGGGTAAACTTGAAGACT GTCTTCAACTATTGGTAGAAAGCAATCGGATTCCAGAGGCAGCTTTAATGGCTAGATCATATCTCCCAAGTAAGGTCTCT GAGATTGTGGCAATTTGGAGGAAAGATCTCAACAAGGTTAATCCTAAAGCTGCTGAATCTTTGGCTGATCCTGAGGAATA TCCAAATTTGTTTGAAGACTGGCAAGTCGCCCTTGCTGTTGAATCTAAAGCTATAGAAACAAGGAATGTTTACCCTCCTG CAGAGCAGTACATCAGCCATGCTGACAAATCACATGTAACCCTTGTTGAAGCTTTCAGAAACATGCAGATTGAAGAAGAG GAGCCTCTTGAGAATGGTGACTCGAATTATGAGTACACAGAGGAACAAGAGGAACAGAATGACTACAATGAGGAACAGGA GGAACAGAATGGAGAGGAAGGAAGCCAAGAGGAGGCCGTTGTAGTGGATGCGGAATCAACAGATGGTGCAGTACTCGTCA ATGGTAACGAGGCTGACGAAGAGTGGGGTACGAATAATGAAGGAGCCCCGTCAGCCTAA
Protein sequence (LotjaGi3g1v0015600.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW EKGWICTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDD HTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYLKSSRRVVI GYDEGTIMVKLGREVPVASMDNSGKIIWAKHNEIQTVNIKSIGVDAEVADGERLPLAVKELGTCDLYPQNLKHNPNGRFV VVCGDGEYIIYTALAWRNRSFGSALEFVWSTDGEYAVRESTSKIKIFSKNFQEKRSVRPTFSAERIFGGTLLAMCSNDFI CFYEWAECRLIYRIDVNVKNLYWADSGDLVTIASDTSFYILKYNRDVVSSHLDSGRPVDEEGVEDAFELLHEMNERVRTG IWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERAS EVLPSIPKDHHNSVARFLESRGMIEDALEVATDPDYRFDLAIQLGRLEVAKSIAIEVQSESKWKQLGELAMSTGKLEMAE ECLKHAKDLSGLLLLYSSLGDAEGISNLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVS EIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVESKAIETRNVYPPAEQYISHADKSHVTLVEAFRNMQIEEE EPLENGDSNYEYTEEQEEQNDYNEEQEEQNGEEGSQEEAVVVDAESTDGAVLVNGNEADEEWGTNNEGAPSA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 252 | 252 | 8.4E-101 | ||
| PANTHER | 1 | 855 | 855 | 0.0 | – | |
| PIRSF | 1 | 842 | 842 | 0.0 | ||
| PANTHER | 1 | 855 | 855 | 0.0 | – | |
| SMART | 3 | 37 | 35 | 47.0 | ||
| SUPERFAMILY | 5 | 249 | 245 | 8.99E-68 | ||
| ProSiteProfiles | 5 | 218 | 214 | 45.137 | ||
| CDD | 9 | 249 | 241 | 4.69156E-60 | – | |
| SMART | 40 | 79 | 40 | 8.5E-9 | ||
| Pfam | 43 | 79 | 37 | 6.9E-6 | ||
| ProSiteProfiles | 47 | 79 | 33 | 12.747 | ||
| SMART | 83 | 123 | 41 | 5.3E-9 | ||
| Pfam | 86 | 123 | 38 | 2.0E-4 | ||
| ProSiteProfiles | 90 | 132 | 43 | 13.65 | ||
| PRINTS | 110 | 124 | 15 | 1.3E-6 | ||
| SMART | 126 | 167 | 42 | 1.1E-7 | ||
| Pfam | 129 | 167 | 39 | 4.3E-6 | ||
| ProSiteProfiles | 133 | 176 | 44 | 12.514 | ||
| PRINTS | 154 | 168 | 15 | 1.3E-6 | ||
| SMART | 170 | 209 | 40 | 5.1E-12 | ||
| Pfam | 172 | 208 | 37 | 8.0E-9 | ||
| ProSiteProfiles | 177 | 218 | 42 | 15.789 | ||
| SUPERFAMILY | 179 | 446 | 268 | 4.58E-17 | ||
| PRINTS | 196 | 210 | 15 | 1.3E-6 | ||
| Pfam | 271 | 715 | 445 | 1.1E-164 | ||
| Gene3D | 542 | 750 | 209 | 4.8E-87 | – | |
| MobiDBLite | 797 | 872 | 76 | - | – | |
| MobiDBLite | 801 | 834 | 34 | - | – | |
| Coils | 812 | 832 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Structural molecule activity | The action of a molecule that contributes to the structural integrity of a complex or its assembly within or outside a cell. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. | ||
| Cellular component | Membrane coat | Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules. |
Expression pattern of LotjaGi3g1v0015600.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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