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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0025300 |
| Transcript ID | LotjaGi3g1v0025300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mini-ribonuclease 3; TAIR: AT1G55140.1 Ribonuclease III family protein; Swiss-Prot: sp|P74327|MRNC_SYNY3 Mini-ribonuclease 3; TrEMBL-Plants: tr|A0A0S3SFS1|A0A0S3SFS1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0025300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:2755899..2766174) extracted from Lotus japonicus Gifu genome v1.2.
CGAACACAAGTAAATAATATCTTGGTGAGTGAGTTGACGCAGCAAAAAGAAAAATGCAGGCTCTATCTTGTATATCAATG TCACTACCACTGTGTCTGAAACTGAGGGCTTCATGGGACACTCAAGAACAACAGAGACTCCCTTACAACCCCAACGCTCC CAGAAAGCTCAAGAAAACCAACCTTCCAACAACAACTACTACTCTCACTCAAACTCAATCCCCTCTTCCTCTCTCTCCGC GCAAGGAGCAGTACATTTCTGATCTTCTCGAGCGCACCACTCCTCTCCCCACCATAGGTATATTCTATTATGCTCGCATT TGATATAATTTGAGCTTATTTATGCAACTGTTTTGGTTAGAGTGTGTTTGTTAAAACAACTTAATTAAGCGCTTATTCAT AAGCTAATTTAAGGAATTTATTAATATAAGTTGAAAATATGACATGACCCGTTTGAAAGAGCTTATGTAAATAGTTTATA AGCTGTTCAGAATAGCTTATGAAAAATGGCTTATGCTTATTTATAACCTATCTTCAACTTAGGTCAATAAATTTCTTAAA ATATTGAATAAACAGATATGCAATAAGCACTTATGCCCGACCATGAGCGCTTAATTAAGTTGTTTTCCCAAACGCACCTT GTAAATAAGCACAAAGTCTTATTCATAACGTACTCATATTAGGTGATTGATACAGACTTAATGCTACCTTTAAACTTCTT AAATTAAACTTATGAACAAAAGCTTTTATGTGATAACTGGTTAATTAAGCTGATATTTTTTCATGCTTTATACATGTATC ATTAGTCTATTATCTTCAAATTGCTCATTCGTTTGTACTGTGTACAGCGCATGTAGAAAAGGAACAAGATGAATCCTACC TGGGATATGAGAGATGGCTGCCAACTCCACCCAAAGTGGTGAAGCCTCGCTCTGTGTTTAATGCTGCTACCTTAGCATAT ATTGGTGACGGCATTTATGAGGTCTTTTTCTTTCTCATTACCTTTGTTTTTTCCTCCCACTAACCACTATCAGTAGATAA AAACTCATATGTAGTCAAATTTGAATTTGACAAAAGAGAGACTGAATTTGGTCAAGCATGGACTTTGAAAATTTTGTTTT TGAAGTACTAGAGTTTTAATAAGGCCAGTGTTGTTAATGATGGATGGCGGAAAGCCTAAAACAGGCCAAATTTGACAAAC ACTGATGGTCGAATATCAGCCATGGCGGCTTTCTGTAATTCCGCCATGAGATCTTTGACAAAAATAACACTACGAATCTA TTCTTATTCTTCTTCTTTTTTGTATGAAACAAACTGAATTTTCAAGTTTTCATTACCTATGTTAACTGGTGAGGCTTGCC TATTTTGTATAAAAAATTGTGTTCAGTAAAATTGTAACAATTCTTGTGGTTTTCAGAATTTCGAGGTATCTTATTCTAAT TTTTCTTCTGAAACATGCAGCTATATGCTCGTAGACACTTTTTATTTCCTCCCCTTAGTATTGAAGAGTACAATGATCGT GTGATGGCAGTTGTGCGTTGTGAGGCTCAAGTATGAATTTTTTCCTTACTTTTTTATTTTGACCTTTTGTATCATGTGTG TGATGAAGTTAAGTAATAACTTTTTCTTGCTTCTTCATTTTAATTTTTTGTATCATGTATGCGATGAAGTTAAGTAAGTA ATAGTTCTTTTCTTGGTTCTTTATTTTAACTTCATGTATCATGTCATGTTTGCATTGGAGTTAGACAAGTAACATGCTAG TTTTAGGCTGACATCACATTTTAACCCAAAATGAGTGTATGGGCCGTTACACTTATATTGTCTTCACTTAATTCATTTCT AACCGGCATGGGTGATAGATCAAGACCCTTAATTACAGAGGTCTACCAGATTAGAAAAAGGATAAATATAGAAGATAACA ACCTCTAAGAGTTGTTAGAGTTAGTACTAACTGTGCAAACTGAAATAAGAAGTTAGGCTGTGTTCAGATACCTGTTGGCA CCAGTGCAAGCAGAAACACTCACTTTGAGACATTAAGTGAACGGATCGAGGAAAAAGTACTTCCACTTTAGGGTTAACTT ATATCCAAACATACATTTAGTTGTCATTTTCAGTTAGAGATAGATGTCATTTTCAGTCAGTTAGCTAAGAATAATCAGGG GGAGTGAAGGAGACAAAGGAAAGCACTTGTATTGGGTGGAGACTGTGAAGAGTTATTGGGTTTCTCAAATATTTAGTGCC ATTCTTGTATTCTTGGGGTCTTCTCGGTCTAGCCTCACTGGTTAAGGTTAGGAAGTCCTCTTTGATCAATAAAATACTAT CTTTTTATACCAGTTCTAACAAACTGGTATATTAGCTCCGGACGGATCTAATATACCAAACTATTAAATTGCTTTTCTGA GGTTTTCAAGATGTTTGGGCTGCTTCCATCCCGTGGATTAGCCCATTCCATCGTCTTGAAAGAGAACACCAAGACAGTAG TGTAAGACATTATGAGGACACTCATCAGTAGAAGAATGAGATAGAGTGCCAAATTAGGATGCTATTTTTAGACAGAATAT TTGTATTATTATCAGGATAGTATTTTCCATTTGTTTTTTCCTGATTATGTAAGTCGTCTTGATATTTCATTCGCTGTACT ATAAATTAGAGCTTATAACTGAGTATAGGCAAGAAATACATTAATACAATAAAGAGAGTGTTTCAGTCCTTTCAAGTCTA ATTTATACAAAAAAAGTATGTTTCTAATCTTATATATGAAATTGTTCATCTTTTGTGCATTCCAGGATGCATTGCTCCAG AAACTTCTTAACACTGACTTCTTATCAGATCAAGAGAGGTTAGAATCTGTTACTCTTTGGTCTCAGCATCCCCCCACCCC CGCAGGTTCAACAAACCTATTTTCCACTTTATTATGACATTATATGAAGATTCATCTCATGAAGATTCTGAAATATGAGA TCCTGTTATTTGGTGCATGAAAACTTCACAAGCAAGTGAACTTTAATCTTATATGCAGATTTATCACTGTTGTTGGAAAA TAAAAAGGAATATCCTGCCCAATATTTTGAAGGTCTATATGTTTTAGAAACAATTGCCACTCTACATATAGATTATTGAC TCTATGCTTGTATATCCTGTCTTACTCCTGAATTGATTTTGAACAATATGTAATTGAGTTGTATAAGTTTATTGCCAGCT GGTTGGTTAGCTTCGTTTTGAAATGTAGCAGCTTTATTTCTCTAAAAGATAGGGGGCATTTGATAGGATTGTCAGTCAAG TTAGGCCTCCTATTAGGAAAGTTTATGAGAGAAGGAACCGAGTTACATAGCTTTTAGCCCTTGTGGTGTTTCTGTTTTGC TGAGCTGTAATGCCAGCTGTAATTCCTAGCAGATTAGTTAGGAATGATTAGTATAAATAAGGGAAGCTTAGTCTTCACTA GTTAGGCAGTTATAGAGTTGATTGGTTAGAACTGAATTGCAGGGCAATTCAGTTGGCATCTCTGTAACCGTTTTCTAACT GTTCTCTCAGTTTCAATACACATTCACTGCTCATCTTCTTCCTCAGATTTCTAGGTTTTTCTCTTGGATTTACAGTACCA GATCTAACACTGGTATCAGAGCACCGTTCTGGTGCCCTGATTTCTGCTTCCTTGAACTGCGCATTGCATGAAGACGAGAA GTATGGTGAGAGACTCGAACGATTGGGAGCAAGAACGAGAGGAATGGCGCACGCGATTGGAACTGGCGGAGGCGCGCGCA AAACGCACGGAGGATCAATTGGCTGCACTCGCGGCCAAGATCGATTCCAGCGGCGGCGAAACCGTGCGTAGAGAAGAAGC GGAATCCAGCGGCGGCGGAAGGACCCAGGGAGACCACGTCGAGCGCGATAGGTGGAGGAAGCTTGAGATTCCGATTTTCT CCGGCGACGACGCTTACGGTTGGACACACCGTTTGGAGCGTTACTTTGAGTTGCGCAGCGTTCCAGAGGAGGAGAAGCTG CGAGCGACGCTGGTGGCCATGGAAGGTAGAGCGTTGAGCTGGTACCACTGGTGGGCTAGGTGCAATCCTGAACCAACTTG GGACGGGTTCAAGCTGGCAGTGGTTCGCAGGTTCCAGCCATCAATGGTGCAGAACCCTTTTGAGTTGTTGCTGGCGCTCA AGCAAACAGGGACAGTGGTGGAATTTGTGGAAGAGTTCGAGAAGTACGTTGGAGCTTTGAAGGCCATTGATCAAGAATTT GCAAGGGGAATTTTCATGAATGGCTTGAAGGAGGAGATACAAGTGGAGGTAAAACTTTATGAATTGAAGTCTCTTTCTGA TTTAATTCAAAAGTCAATCATGATTGAAGAAAAGAATGCTGTATGGAATAAGAAAGGAACCAGTAGCTTCAATAAACAAA ATAATCACCTAAAAACCAGTTCTTACACTAAGACTGTAACTGTGGATACTAAGCCTTGGTTAGAAAAGAAAAATGAAACT GGCCAAGCTGCTACTTCTCTGGTTAGTACTCAAGCAGGGGAAGTGAATAAGTTCAGGGGGGGTGATTTCAAAAGGTTAAC AGGGGTAGAGATGAGAGGAAAACGGGAGAAAGGACTTTGCTTCAGATGTGATGAGCCCTATCATAGGGAGCATAAATGCA AGAATAAGCAATTCCGAATGATTATTTTGGAGGAAGATGAAGAGGGGGATAGCGACACTGAGTTTCATGAAGTAGAAACT TTCATGTCCTTACAATTGTCTCTTTGTTCAATGATGGGGCTGACTTCCACAAAATCTTGGAAGATACAAGGAGAAGTTCA TAATGAGGTGGTTGTGGTCCTCATAGATTGTGGAGCTTCTCATAGCTTCATATCACAAGATGTGGTACAGAAGTTGGATT TAGTGGTAGCTAAGACACCATCTTACATTGTAGAAGTAGGTGATGGTCATAGGGTGAAATGTAAGGGAAAGTGTTCCAAA TTGTGTTTGCAGCTGCAAGGGTTAGAGGTTGAGCAGGATTTCTATTTGTTCACCTTGCAAGGGGTGGATTTGGTGTTGGG TTTGGATTGGCTTTCTAGTTTGGGAGAGGTCAAGGCTAACTTTGGCAAGTTGGAGCTGACTTTATCTAAGGATGGCAAGC TGATTACGTTAGTGGGAGATCCTTCATTGACTAAGACAGAATTGTCTTATGGTGCCTTCATGCAAATTCTGAAAGAGGAA GGAGAAGGATTGCTAATTCAGTATGACACTGCTGAGCAGAAACCAGCTGAGATCTCAGTTGTTCCAGCAGCTGTTTCAGA GGTTTTGCAGCACTTCTCAGAGGTTTTCGAGGATCCTCAAGGTCTTCCACCTCATAGGAGGTTAGATCATACCATTCACT TGAAAGAGGGGGCTGAGATACCTAATCTCCGACCCTATAAGTATCCTCATTACTAAAAAACTGAGATAGAGAGACTAGTT ACTGAAATGCTTGAGGCTGGAATTATAAGACCAAGCATTAGCCCCTACTCTAGTCCCATTATTTTGGTAAAAAAGAAAGA CGGTGGTTGGCGGTTTTGTGTGGATTATACCCTCAACAAAATCACTATTCCTAATAAATTTCCAATTCCTATCATTGAGG AGCTACTTGATGAACTTGATGGCGCAACTATATTCACTAAATTTGACTTGAAGTCCGGTTATCATCAAATTCGGATGAAG GAAGAAGATATAGAGAAGACGGCTTTCCGACCTCATGAAGGGCATTATGAGTTCTTGGTGATGCCATTTGGCCTCACCAA TGCCCCATCCACTTTTCAAGCTCTCATGAATGAGGTTTTGAAACCTTTTCTCCGGAAGTTTGTCCTTGTTTTTTTTTATG ATATCTTAGTGTTTAGCAAGGATTTAGCTGGGCACATTGTTCATGTCCAGCAAGTGTTGGCTGTGCTGTTGCAAAATCGG TTAAGAGCTAATAGGAAAAAGTGTAGTTTCGGGCAATCTAGTCTTGAGTACTTGGGGCATGTAATTTCTGGTGCAGGGGT GGCAGCTTGTCCCTCTAAAACTGCAGCTATTACATCCTGGCCTGTTCCTATGGATGTTAAGGGCCTTAGAGGTTTCCTTG GATTAACCGGGTATTATAGACGCTTTGTCCAAGGTTATGGGAAATTGGCAAAGCCGTTGACTGAGCTTTTGAAGAAAGAC AAGTTTCAGTGGACTGAGGAAGCTACAAGTGCATTCCAGTCCTTGAAATCTGCCATGGTTGATCTCCCTTTACTGGCTGT TCCAGATTTTAATAAGGTGTTTGTAGTGGAAACGGATGCTTCTAGTAAGGGTTTGGGGGCTGTTTTAATGCAAGAAGGAA GGCCCCTTGCTTTTTGGAGTCAAGGCTTATCATTGAGAGCACAACAAAAGTCTGTTTATGAGCGCGAGTTAATGGTGGTT CAGGCTGTGACCAAGTGGCGCCATTACCTTTTGGGACACCATTTCGTGGTGAAAACTGACCAGAGGAGCCTCAAGTTTTT AACTGACCAACGCTTATTCAGTGCAGAGCAATTTAAATGGGCTGTCAAGCTCATTGGTTTGGATTTTGAAATTCAGTACA AGCCGGGACGAGAGAACACTGCTGCTGACAGCTTATCAAGACGAGACATGTATGCTGCCATTTCAGTTGTTAATATTGAG GATGATGACTCTTGGGAGGAGGAAATGCAGCAAGATCCTAAATTACAACGGCTGGTGCAGGATTTAGTTGTTTCTCCTAC TTCACATGCGGGATATGAGTTCAAGAAGGGGAGACTATTGTATAAGGGGAAGCTGGTATTGCCAAAGGGATCTAACAAGA TACCTCTAATCTTGGCTGAATGTCATGACTCTCCTTGTGGTGGGCATTCAGGTCTGTTCAGAACTTTTAAGAGGATTTCT AGCTTCTTGTTTTGGGAGGGCATGCGGGGTGACATTAAGAAATTTATTGAAGAGTGTGATGTGTGTCAACGGAATAAATA TTCCACACTCTACCCGGCTGGTCTGCTTCAGCCTTTACCTATTCCCAGCCAAGTATGGCAAGATATCTCTATGGATTTTG TGGGGGGGCTTCCCCGAGTTCGGGGCAAGGACACCATCTTTGTCGTCATTGATAGACTTACAAAGTATCCTCATTTTTTT CCGCTTGGGCACCCTTACACTGCTAGAGAGGTGGCAGCCTTGTTTGTGAAAGAGGTTGTGAAGCTTCATGGGTTCCCTTC TACTATTGTGTCGGATAGGGATGCAATTTTTCTCAGCAGTTTTTGGAAGGAGATGTTTAAATTGGCTGGCACCAATTTAA GGCATAGTACGGCTTATCATCCTCAAACGGATGGACAAACCGAGGTGACTAATAGATGTTTGGAGACCTATCTTCGGTGT TTCGTTGGCCCTAAGCCTAAGACTTGGTTGAACTGGTTGCATTGGGCTGAGTTCTGGTTTAACAGCAATTATAATGTGTC CGCGGGTATGAGTCCTTTTAAAGCTTTGTATGGAAGAGACCCACCTTTGTTGATAAAGGGCTGCACTATTCCATCAAGGT TGGAGGACGTCAACCAATTGACCCAGCACCGCGATGCTTTACTTGCTGAACTGAGACAGAACCTTTTGAAAGCTCAAGAT CAGATGCGAGCTCAAGCAGATAAGCACAGAAGGGACGTGCAATTTGAGGCTGGAGAGTGGGTTTTCTTGAAACTGCAGCC TTATAAGCTGAAGTCCTTGGCTGATAGACCATACACTAAATTGGCTCCTAAGTATTATGGTCCTTTTCAGATTCTGAGCA GAGTTAGGTGGCTTACAAGTTGGATCTGCCTATCGCGTCTAAAGTTCACCCGGTGTTTCACGTTTCTTTGCTTAAGAAGG CTGTGACACCTCACCTTTCTCCACAGACCTTGCCACCTATGCTGACTGAAGAGTTAGAATTGGCTGTACAACCGGAGGAC ATTCTGCAGTGGAGGACTGATGTCGGAGGTAACATGGAGGTTCTGGTGAAATGGGTTGATATGCCATCCAGTGACAACTC TTGGGAGCGAGCTTCAAAGATGCTGGAGACTTTTCCTTCTTTTCCCCTTGAGGACAAGGTGGTTCTTTTAGGGGGGGGGG GGGTATTGATAGGATTGTCAGTCAAGTTAGGCCTCCTATTAGGAAAGTTTATGAGAGAAGGAACCGAGTTACATAGCTTT TAGCCCTTGTGGTGTTTCTGTTTTGCTGAGCTGTAATGCCAGCTGTAATTCCTAGCAGATTAGTTAGGAATGATTAGTAT AAATAAGGGAAGCTTAGTCTTCACTAGTTAGGCAGTTATAGAGTTGATTGGTTAGAACTGAATTGCAGGGCAATTCAGTT GGCATCTCTGTAACCGTTTTCTAACTGTTCTCTCAGTTTCAATACACATTCACTGCTCATCTTCTTCCTCAGATTTCTAG GTTTTTCTCTTGGATTTACAGTACCAGATCTAACAGCATTGAGAAATTTGACGGGGTCTGGAATTTGAAATGCCGAATTT GAGTTTATTTGAATCGACATTTTCATCTGTATCATGGTACATATGACGATGGGGTGAAGCCAATAAACAGTAAACTTTGC AAAGAAAAAATGAACATACTGTTGGATTTGCTGAAATATGCCACAACTTTTCTAATCTAATGCAAATTTAACAAGTGACT AGACACTCAGGATGATTAGAGTTTGGTAGATCATAGGAGATTTGTTAAGTTACAATTTTGGCTTTGGCTTATGGCTTTTA ATGAACTTTATTGCAGGGATGTTCTTCGATGGGGAAAGAACATCACTTCAAGCAAAACTAAGACCAAAAAGCGTGCTGGT GCAGCTGTATATAACAGGGCTTCTTCACTAGAAACATTAGTCAGTGACTTCAAACTCTGGGTTCTCTTCTGATATAAATC TTGCATAAAATAGTCATCTGATTCTTGGGACTTTTCTTTTATTGTTTTACTCTAAAATGGTGATGACAACAACAGTGTAC TGATTTTCTCAATGATTACTGTTAAAAAACACAACTAGGAATAGCCACACACATCCGAATGTTTTTTTTTATTTGTATAC TATATGTTGCAAAATAAACTATTAAAACTATTTGCAACATCACTGTTTTTCAATTTCAGCTTACTTTTGGGTACAACATA TCCAACTGCTAATATTTTTCATTTGTGACAGACAATCAGATAATTTGTTAGGAATAATCTGAAGAAAAATAATTCTTTCG TAATTTGTTTTCAGCCTCTTCTCTAACAGATATCTATTGAACTAGGTTGGCTATCTCTATTTGACAAATGTACATCGCTT GGAAAAGCTAATGGTAGCATTGGGATTCTCAGTTGACTCTTCAGTTCCTTTTAATTTGGAGGAAGCAATAGTAAGTTTCA TATTATCCAGTCCAGCACTCTAGCTTACTATTTATTTTTGCTGTTTAATTTTTGCTTTCCCAGTTGGACTTAAATAGAAA CCTACTCTAATATTACAGAAAACCGGGAATTAACCAGAATTTACAGAAAACGAAATATGGGGAAAATTAAGTAATTAGTA TCTCATAGAAGGCTTCAATGGTATGATCCAAACAAGTCTGCTGTTTTTGCATTTATGGAACAACATAATCTAGCTTATAC AAGAATCTGTTTCTTGTACTTTTCATGTAGTGGTAGTAGTAGACTTGAACATTGATAATTTATGGTGTTACCTCTATTTG TAAGTGTCAGCAAACACTTTGGTGTTGGTTCACTAGCTAAAAATTGGATTTTCTTTCCACATTTAGACAGGTGAGTTGAA AAACAGATGAAGATGATCTTGTGGAAATCTTCGACTGGAGCAGGCGAAACGACTTATACAAGATCTAGTTTGATCCCATG TATTCTTCCGTGAAGATTCAATGTCATGCAGATTCGAGAAAGTTTTACATTCTTATGCAAAGCGTATCTTAGTAGCTTGA CTTCCTCTTAGCTGTTGTGCCAGTACCACATTCCAACAGCATATTTTTCCATGCTAGAGATCTGAAGCCTTTCAGGTCCT TTGTATCTATTTCTGTTATACAAAGGTTGTGGTAGTACCATAGTTTCTTAGCACTTTATTGCAATCAAAAGAAGATAATG CAGTGAAACTTCGGTTCTATGCTGTAGATTTGTGTTAGGGCTTGCAAATTTTGCTCGAGTTCAGTCCAGTTGATTGGATT TTGTAGAATTAAGTTACATAGGGACAATTATTTGTAATATTGTTTTGGAATTATTATTATTTTGTTAAAATTTTCAATTA TATATATCGTAAATTAATCTTCCAAGTGTAAAAAAA
CDS sequence (LotjaGi3g1v0025300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGGCTCTATCTTGTATATCAATGTCACTACCACTGTGTCTGAAACTGAGGGCTTCATGGGACACTCAAGAACAACA GAGACTCCCTTACAACCCCAACGCTCCCAGAAAGCTCAAGAAAACCAACCTTCCAACAACAACTACTACTCTCACTCAAA CTCAATCCCCTCTTCCTCTCTCTCCGCGCAAGGAGCAGTACATTTCTGATCTTCTCGAGCGCACCACTCCTCTCCCCACC ATAGCGCATGTAGAAAAGGAACAAGATGAATCCTACCTGGGATATGAGAGATGGCTGCCAACTCCACCCAAAGTGGTGAA GCCTCGCTCTGTGTTTAATGCTGCTACCTTAGCATATATTGGTGACGGCATTTATGAGCTATATGCTCGTAGACACTTTT TATTTCCTCCCCTTAGTATTGAAGAGTACAATGATCGTGTGATGGCAGTTGTGCGTTGTGAGGCTCAAGATGCATTGCTC CAGAAACTTCTTAACACTGACTTCTTATCAGATCAAGAGAGGGATGTTCTTCGATGGGGAAAGAACATCACTTCAAGCAA AACTAAGACCAAAAAGCGTGCTGGTGCAGCTGTATATAACAGGGCTTCTTCACTAGAAACATTAGTTGGCTATCTCTATT TGACAAATGTACATCGCTTGGAAAAGCTAATGGTAGCATTGGGATTCTCAGTTGACTCTTCAGTTCCTTTTAATTTGGAG GAAGCAATAACAGGTGAGTTGAAAAACAGATGA
Protein sequence (LotjaGi3g1v0025300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQALSCISMSLPLCLKLRASWDTQEQQRLPYNPNAPRKLKKTNLPTTTTTLTQTQSPLPLSPRKEQYISDLLERTTPLPT IAHVEKEQDESYLGYERWLPTPPKVVKPRSVFNAATLAYIGDGIYELYARRHFLFPPLSIEEYNDRVMAVVRCEAQDALL QKLLNTDFLSDQERDVLRWGKNITSSKTKTKKRAGAAVYNRASSLETLVGYLYLTNVHRLEKLMVALGFSVDSSVPFNLE EAITGELKNR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| Phobius | 16 | 19 | 4 | - | – | |
| PANTHER | 17 | 234 | 218 | 9.4E-69 | – | |
| Phobius | 20 | 250 | 231 | - | – | |
| MobiDBLite | 28 | 59 | 32 | - | – | |
| MobiDBLite | 39 | 59 | 21 | - | – | |
| CDD | 101 | 216 | 116 | 6.18608E-10 | ||
| Gene3D | 104 | 234 | 131 | 2.4E-40 | ||
| SUPERFAMILY | 110 | 227 | 118 | 2.46E-25 | ||
| Pfam | 116 | 216 | 101 | 2.5E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ribonuclease III activity | Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt. | ||
| Biological process | RNA processing | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. |
Expression pattern of LotjaGi3g1v0025300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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