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SSF69065

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004525
Molecular function Ribonuclease III activity Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt.
Subterm of
GO:0006396
Biological process RNA processing Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
Subterm of
Part of

Associated Lotus transcripts 38

Transcript Name Description Predicted domains Domain count
Lj0g3v0041629.1
– PREDICTED: dicer-like protein 4-like [Glycine max] gi|356565129|ref|XP_003550797.1|
Domains
40
Lj0g3v0041629.2
– PREDICTED: dicer-like protein 4-like [Glycine max] gi|356565129|ref|XP_003550797.1|
Domains
40
Lj0g3v0060749.1
– PREDICTED: mini-ribonuclease 3-like isoform X2 [Cicer arietinum] gi|502081294|ref|XP_004486823.1|
Domains
13
Lj0g3v0186219.1
– Ribonuclease III family protein [Theobroma cacao] gi|508699738|gb|EOX91634.1|
Domains
11
Lj1g3v1788430.1
– PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog 3a-like [Cicer arietinum] gi|502132552|ref|XP_004501416.1|
Domains
38
Lj1g3v5034650.1
– PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max] gi|356571230|ref|XP_003553782.1|
Domains
11
Lj2g3v0866690.1
– PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog 3a-like [Cicer arietinum] gi|502132552|ref|XP_004501416.1|
Domains
29
Lj2g3v1963040.1
– Ribonuclease [Medicago truncatula] gi|357453661|ref|XP_003597111.1|
Domains
9
Lj2g3v3188380.1
– PREDICTED: ribonuclease 3-like protein 2-like [Cicer arietinum] gi|502099207|ref|XP_004491416.1|
Domains
17
Lj3g3v0306890.1
– PREDICTED: mini-ribonuclease 3-like isoform X2 [Cicer arietinum] gi|502081294|ref|XP_004486823.1|
Domains
14
Lj4g3v1535060.1
– Ribonuclease [Medicago truncatula] gi|357477313|ref|XP_003608942.1|
Domains
14
Lj5g3v0962640.1
– PREDICTED: ribonuclease 3-like protein 2-like [Cicer arietinum] gi|502099207|ref|XP_004491416.1|
Domains
12
Lj6g3v1629840.1
– PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max] gi|356533095|ref|XP_003535104.1|
Domains
11
Lj6g3v1629870.1
– PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max] gi|356532427|ref|XP_003534774.1|
Domains
10
Lj6g3v1629940.1
– PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max] gi|356532427|ref|XP_003534774.1|
Domains
5
LotjaGi1g1v0026400.1
– Ribonuclease 3-like protein 3; TAIR: AT3G20420.1 RNAse THREE-like protein 2; Swiss-Prot: sp|Q9LTQ0|RTL2_ARATH Ribonuclease 3-like protein 2; TrEMBL-Plants: tr|A0A1J7IPZ1|A0A1J7IPZ1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0026400
Domains
18
LotjaGi1g1v0372300.1
– Dicer-like protein 3; TAIR: AT3G43920.2 dicer-like 3; Swiss-Prot: sp|Q5N870|DCL3A_ORYSJ Endoribonuclease Dicer homolog 3a; TrEMBL-Plants: tr|K7KIB7|K7KIB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0372300
Domains
41
LotjaGi1g1v0791500.1
– Ribonuclease 3-like protein 3; TAIR: AT3G03300.1 dicer-like 2; Swiss-Prot: sp|Q3EBC8|DCL2_ARATH Endoribonuclease Dicer homolog 2; TrEMBL-Plants: tr|A0A151TUM2|A0A151TUM2_CAJCA Endoribonuclease Dicer isogeny 2a; Found in the gene: LotjaGi1g1v0791500
Domains
13
LotjaGi1g1v0798000.1
– Endoribonuclease Dicer-like protein 3; TAIR: AT1G01040.1 dicer-like 1; Swiss-Prot: sp|Q9SP32|DCL1_ARATH Endoribonuclease Dicer homolog 1; TrEMBL-Plants: tr|K7N0F5|K7N0F5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0798000
Domains
44
LotjaGi1g1v0798000.2
– Ribonuclease 3-like protein 3; TAIR: AT1G01040.1 dicer-like 1; Swiss-Prot: sp|Q9SP32|DCL1_ARATH Endoribonuclease Dicer homolog 1; TrEMBL-Plants: tr|A0A072U4N5|A0A072U4N5_MEDTR Endoribonuclease dicer-like protein; Found in the gene: LotjaGi1g1v0798000
Domains
18
LotjaGi1g1v0798000.3
– Ribonuclease 3-like protein 3; TAIR: AT1G01040.1 dicer-like 1; Swiss-Prot: sp|Q9SP32|DCL1_ARATH Endoribonuclease Dicer homolog 1; TrEMBL-Plants: tr|A0A072U4N5|A0A072U4N5_MEDTR Endoribonuclease dicer-like protein; Found in the gene: LotjaGi1g1v0798000
Domains
18
LotjaGi1g1v0798000.4
– Endoribonuclease Dicer-like protein 3; TAIR: AT1G01040.1 dicer-like 1; Swiss-Prot: sp|Q9SP32|DCL1_ARATH Endoribonuclease Dicer homolog 1; TrEMBL-Plants: tr|K7N0F5|K7N0F5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0798000
Domains
44
LotjaGi1g1v0798000.5
– Endoribonuclease Dicer-like protein 3; TAIR: AT1G01040.1 dicer-like 1; Swiss-Prot: sp|Q9SP32|DCL1_ARATH Endoribonuclease Dicer homolog 1; TrEMBL-Plants: tr|K7N0F5|K7N0F5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0798000
Domains
44
LotjaGi2g1v0407000.3
– Ribonuclease 3; TAIR: AT4G37510.1 Ribonuclease III family protein; Swiss-Prot: sp|Q9SZV0|RNC1_ARATH Ribonuclease III domain-containing protein RNC1, chloroplastic; TrEMBL-Plants: tr|A0A151SCA9|A0A151SCA9_CAJCA Ribonuclease 3; Found in the gene: LotjaGi2g1v0407000
Domains
10
LotjaGi2g1v0407000.5
– Ribonuclease 3; TAIR: AT4G37510.1 Ribonuclease III family protein; Swiss-Prot: sp|Q9SZV0|RNC1_ARATH Ribonuclease III domain-containing protein RNC1, chloroplastic; TrEMBL-Plants: tr|A0A151SCA9|A0A151SCA9_CAJCA Ribonuclease 3; Found in the gene: LotjaGi2g1v0407000
Domains
7
LotjaGi3g1v0025300.1
– Mini-ribonuclease 3; TAIR: AT1G55140.1 Ribonuclease III family protein; Swiss-Prot: sp|P74327|MRNC_SYNY3 Mini-ribonuclease 3; TrEMBL-Plants: tr|A0A0S3SFS1|A0A0S3SFS1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0025300
Domains
14
LotjaGi4g1v0097200.1
– Ribonuclease 3; TAIR: AT4G37510.1 Ribonuclease III family protein; Swiss-Prot: sp|Q9SZV0|RNC1_ARATH Ribonuclease III domain-containing protein RNC1, chloroplastic; TrEMBL-Plants: tr|A0A0S3R594|A0A0S3R594_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0097200
Domains
9
LotjaGi4g1v0097200.2
– Ribonuclease 3; TAIR: AT4G37510.1 Ribonuclease III family protein; Swiss-Prot: sp|A6YSL1|RNC1_MAIZE Ribonuclease III domain-containing protein RNC1, chloroplastic; TrEMBL-Plants: tr|G7JCT8|G7JCT8_MEDTR Ribonuclease III domain protein; Found in the gene: LotjaGi4g1v0097200
Domains
7
LotjaGi4g1v0239100.1
– Ribonuclease 3; TAIR: AT1G24450.1 Ribonuclease III family protein; Swiss-Prot: sp|Q9FYL8|NFD2_ARATH Protein NUCLEAR FUSION DEFECTIVE 2; TrEMBL-Plants: tr|I3T487|I3T487_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0239100
Domains
16
LotjaGi4g1v0239400.1
– Ribonuclease 3; TAIR: AT1G24450.1 Ribonuclease III family protein; Swiss-Prot: sp|Q9FYL8|NFD2_ARATH Protein NUCLEAR FUSION DEFECTIVE 2; TrEMBL-Plants: tr|I3T487|I3T487_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0239400
Domains
16
LotjaGi4g1v0239400.2
– Ribonuclease 3; TAIR: AT1G24450.1 Ribonuclease III family protein; Swiss-Prot: sp|Q9FYL8|NFD2_ARATH Protein NUCLEAR FUSION DEFECTIVE 2; TrEMBL-Plants: tr|I3T487|I3T487_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0239400
Domains
16
LotjaGi4g1v0239400.3
– Ribonuclease 3; TAIR: AT1G24450.1 Ribonuclease III family protein; Swiss-Prot: sp|Q9FYL8|NFD2_ARATH Protein NUCLEAR FUSION DEFECTIVE 2; TrEMBL-Plants: tr|I3T487|I3T487_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0239400
Domains
17
LotjaGi4g1v0283700.1
– Dicer-like 3; TAIR: AT5G20320.1 dicer-like 4; Swiss-Prot: sp|P84634|DCL4_ARATH Dicer-like protein 4; TrEMBL-Plants: tr|K7MKZ2|K7MKZ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0283700
Domains
45
LotjaGi5g1v0164100.1
– Ribonuclease 3-like protein 3; TAIR: AT3G20420.1 RNAse THREE-like protein 2; Swiss-Prot: sp|Q9LTQ0|RTL2_ARATH Ribonuclease 3-like protein 2; TrEMBL-Plants: tr|A0A1J7IPZ1|A0A1J7IPZ1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0164100
Domains
13
LotjaGi5g1v0164100.2
– Ribonuclease 3-like protein 3; TAIR: AT3G20420.1 RNAse THREE-like protein 2; Swiss-Prot: sp|Q9LTQ0|RTL2_ARATH Ribonuclease 3-like protein 2; TrEMBL-Plants: tr|A0A1J7IPZ1|A0A1J7IPZ1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0164100
Domains
13
LotjaGi6g1v0269600.1
– Endoribonuclease Dicer-like protein 3; TAIR: AT3G03300.1 dicer-like 2; Swiss-Prot: sp|Q3EBC8|DCL2_ARATH Endoribonuclease Dicer homolog 2; TrEMBL-Plants: tr|I1L0G0|I1L0G0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0269600
Domains
37
LotjaGi6g1v0269600.2
– Endoribonuclease Dicer-like protein 3; TAIR: AT3G03300.1 dicer-like 2; Swiss-Prot: sp|Q3EBC8|DCL2_ARATH Endoribonuclease Dicer homolog 2; TrEMBL-Plants: tr|I1L0G0|I1L0G0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0269600
Domains
37
LotjaGi6g1v0269800_LC.1
– Ribonuclease 3-like protein 3; TAIR: AT3G03300.4 dicer-like 2; Swiss-Prot: sp|Q3EBC8|DCL2_ARATH Endoribonuclease Dicer homolog 2; TrEMBL-Plants: tr|A0A1J7HMM6|A0A1J7HMM6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0269800_LC
Domains
10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd00593 CDD 1 2.63