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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0079700 |
| Transcript ID | LotjaGi3g1v0079700.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | tRNA (guanine(37)-N1)-methyltransferase; TAIR: AT4G27340.1 Met-10+ like family protein; Swiss-Prot: sp|F6H2F8|TRM51_VITVI tRNA (guanine(37)-N1)-methyltransferase 1; TrEMBL-Plants: tr|A0A0B2R1V7|A0A0B2R1V7_GLYSO tRNA (guanine(37)-N1)-methyltransferase; Found in the gene: LotjaGi3g1v0079700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:8816963..8821986) extracted from Lotus japonicus Gifu genome v1.2.
GTAGTAGTTCAAGGTGAAGTACTGAACAGTTAACGATATATCTTTAATTTCTAATTATCATCACAAACTATTTATCTGTT GTTGTATATCTCCTTGTTATTTGATGTCCCATCTCTTAGTTTACAAATGGGACTGATCACAGTTATACTCATGTTTTCCT TTCTACTTATCATGAAAATTTGTTCAATCTGTGTTTTGGGTATGTGACATCTCTTCTGTTCACATATGACATGGCTCAAA TTTTATCCTGTCTTCAGGCTGTCTTGAAGGAGTACACGGAAAAGAGTACAACTTTGACTTTTGAGCTAGTTAGATGCAGG CTAAAATTGTTTTATGATTACTGGCAGATGAATGAGGTATATTTTACCAAGACAATCTCCTATAAACTTAATCTGTTTTT GGCTGTACGTGCATGATAAATTGCACTCTTCACTGTCATAATTAACTTAGTGGGATGGGCGTTTCAAAACAAAGTAATAT GGTAGTTTTGTTTCATTTATTGGAGAGTTGAACTACAGAGAGGATAGTCCTATAGCTGTTAAAATGTAAAATGTACTCTT TGCTGTCATGTTTAATTTAAGTGGAACAGGTGCTTCAAAACAAAGTAATATGGTTTTTGTGTTTTAGTTATTGGAGAGTT GAATTAGATAGAGGATAGTCTGATAGCTGTATCAATTTTAACACAACTAAAGATTTTCGTTAGTTTGTGAAAATTGGATT TTACATTATAACCAACTGCTGATTATCGTCTACAATTATTTTTCAACTCCAAATCTTTATTTAAGTATGAGGCCAAGAAA CTTGTGTGCATGTGTTCGTATTTCCATTGATTTTGTTTATTCAATTTCAAAGTGTGAGTATAACATAAATTGTGGGTCTT ATATGATTGCTGCAGACCTTGGAGGTGTTACTGCCTGAGGGTATGGTTGTTCCATCAGCTTTTGAGACTGTTGGTCATAT TGCACACCTGAATTTGAGAGAGGAACATTTACCATACAAGAAGCTTATAGCAAAGGTTCTTGTTTGGAAATAATTTTGGT TACCATGTTTAAATGTGTAAAGTAAGGTTGTATTGCAAATTCTTATCTGTGTTAATGTATGAAATTGCGTTCAGGTTGTA CTGGATAAAAATAAGCCAAAGATAAAAACAGTTGTGAACAAGATTGATTCCATTCAAAATGAGTACAGGACCATGCAGCT TGAGGTTTTAGCAGGAAACCACTCTCTTGTGACTACAGTAGTTGAGAATGGAATTCGCTTTCAGGTTGACTTAGCAACAG TGTATGCTCTATTTCCATCATTGACCAATGTATAGCAATTGACAGGCTTGCTTTACTTGTTGCTCAATTAATATCATTTC ATGAACATGAAGTTTGTTTAACAGTCATAGTTATGTCTTAATTTGATCTTCTCATTTGTATTTCTGTACAAGTAGCACCA TTATACCATGAAAAGGCTATTATACCCTTACCAGTTCTGAAAGTTGCATGAAGGTTTGAAGCGATTAAGGAATCTTGATT TTGACTTATATGTTGAAATTTTTTGTATCATATTTTCTCAGGCAGGTGTGGGTCTCTGCCATTTCTGTAAATATTGATGC AGATATAGTTATGTGTATTGATACCTTCATGTATATGTTATATGTGGAAAAAAATCGTGTGAACCTGCAATGTTACTTCC TACATTTTAGGCTGTCATGTTTTGAATGTTATACGTTTAAAATTTGACCTTGGGGACCATTTATCGTTGCTTCTGAATCA ATTACTTGTAGCACCTATTCATTGAATCTAGAAATATAACATGACTATTTTTTTTTCAAATTTCAAAATATACTCTAGAG AGAGAAATTAGGTGAAAGAATTAATGTAAAAGTATCAGTTATCAATATTTTTTCATTTTCTTTCTATGCAGATATTGGAA TTCTAGGCTTGCAACTGAAAGGCAAAGGCTTCTGAGTGGCTTTACACGAAATGATGTTATCTGTATGTAGTACCTTATTG TTAAGATTATTATATTAGCCTACCTATGCTAGTTATACTTCACTTTTCATGTCTTCTGATCATTGTCTTTCCCATCCCAA TTGTTGAAGTTGGCTGGTCACAGCAACCTGATGTCATACACTGATGATGAAATTTGGTTCTGTTAGAACTGGTAGATCTA GGTTAACAGTAATTGGGGAAAAAATCAAGAACAGAGAAGGAAAATGCAATTGAGATCAGAGAAGATTTGGATTTCTTGAA GAACAAGCTTGGATACAGTTTGGAAGAGAAACCGCTTTCTCTCTCTAGCTAACTGAATTCCTCAATTCAGTTCAAGACTC AACTGTTTCCAAAACTAACTTCTCACTGACAGTAAAGCTATTTATATCCTAGTTTGCTATATTACAAACTAGTCCTTTAA GAAAGTATTTATTCTAAGTCAGTCCTAAACATGGACTAACTAATCCTTATTTTGTCTCCTAACATAGACTTGCGAGACAA TAGGTCTACCCTTGATCCTAACAGGTTCTTTTTTCTTTGCTATGGGATTTTGAATAAATGAACATATTGTGACCATACAA TAATACATGGGTGATTGAGATTTAAAGTGGTTTAGTGGTCACATCTCTAATGATAAACACTCCTCTCACCTGTTACATTC CATATGTGTGTGTGTGTGTAAAGAGCGAGACAGAGGGAATATCTTAGTGGTGGCATAAAGAGGCAATGCTTGAGGGCTCA TTGTGGATTTGATATGCAGTATAACTGTATGAGTGAGAATGGTGAAAAATGCTTGGAGTTTAAATATTGTCTGATGGTAA TTTTAACTTCATAACTTATGGCCTTGATTTAAGAAAAAGGAAAATGGGAACTGTTAAAATTGAAGTTCTTATGATGCAAA TTGCAAAGTCTGAATGAAAATGAAATTGAAAGCAAGAATTAATGGACCACTGTTGAATATGGTGCAAACATGTCCTGGTT GGTTCTTCAAAATCTTTCTTTACTTGCAATAACATATGTTTGTATCTTTAGTTGCTGAAATGTTAAATATGTGCTTCTGT ATGTTATTTATTAAGAAAAATATCCGTGACTTGCTTACGCATGAAACATGAACTTCATTATATATTCAATTGACAGGTGA TGTTTTCTCTGGAGTTGGTCCCTTAGCCATATCTGCAGCAAGAATAGTTAAGCGTGTTTATGCTAATGACTTGAATCCAT ATGCCATTGAGTATCTGGAAAGAAATAGTGTTCTAAATAAACTTGAGAGGAAGATTAAGGTAAGGTTGCTTGTTGAGTGA CTATCTTCTATTCCTCTTGAAGATGTTTTATCAGCTTTTATATATGCAAAAATAAAAATCTAACGCTATGTTAGAAATGT ATTCCAATTTAGGATTTGTAGATGCTATTTCTTGGTTTATATTAAAGTATTGTAAATTAATTTTTTCCGCAACATTTTTT TTTGGAAATTTTTACTTTTTTTAAAGTGTTATGGATTATCTTGAATGTTTTATCATCATTGAAATGAAACAGATCATTTG TTTTCATTTCAAAGAAACACTGAAATGCAAAACATTGAAATATTGTGTTGTCTGATACAAGTGTCCAATACTTGGCTGCA CACAACTCCTTTCTTGAAATGTCCATGCTTCATTGGATGCTGGTGGCTAATGATTAAAAAGAATGAGTTACATGATACGT CTTTTTCACATGTAGAACTGAGACATAAGTTGCATTTGACCCTTTCTTTATGGAATTTTCTACCAAATTAAGGATTTCGA TTGTTTCTCTAGGTCTTTAACATGGATGGAAGAAGGTTCATTAAGGCTATATATGCCAGTGATAAAGCTCAGTCCATCAC ACAAGTGGTTATGAACTTGCCAAATGATGCTGCAGAATTTCTAGGTTGCTTTTTCTTTCTGGGTCATTCTTTCTTTATCT GTACTATATTTTTTTATATCCATATGTTTGATTTGATCTATTGCACACATCTTTTCTGCATGATATAGTTAGATATGTTA GGTTTTTCAGTTTTTCCATAATCTTTTCCTAAGTCATGGATGATGACGTGTCTAACTTGGACTGTTGTTTCAAGTATTTC TGATTAGAGTGAGGGTTGGGTAGGTCCTACTTTTGATCCCTCCCTCATGCATTATAGTTTATATATAAAGACCTGCCATC ATGCCTAGATGTTGAAAGGAATGGCATGAGACCAAAAAATGCTGTATGTCTCAATAGGTTGAAGAACTTAGTTAGAGAAT CTGCACTGCAGTATCTGATGTTTTCTATTGAATTGAACTACACAAACAGAGTTGTAGTTCAACAATCAGCTAGTGAGTAA AAGCATTTATACTTGCACCAACAATCCTACTCCTTTGTTTTTGCATGTGATAACCTTACTTCATAATTGCTGGGTATAGG GTCGTTGGTTTTATGATTGTTCTTGTGTTAGTGGAGAACTAATTTGTCTTTCAATATGAGATTATTGATTCGAGTATTAT TGCTTGGATGAGTTGAACTCATGCAATGATCAGTAGAGTTCTGAGTGGCTTTAGTCATGCTGTTATGGTTTTACAGTTCC TTTCCGTATGGTTAAACTTCTTATGATAGCCGGATTTAATTTCTGGATTGTCTACTTCCCCTGCAGATGCATTTCGGGGA ATATACAAAGATAGACCTAAGGATGGGGAATTTACTTTGCCAATGATCCATGTTTATGGATTCTCCAAAGCACGAGATCC AGAATTTGATTTTCATGAGGTTGGTTACCGAAACTCTAAACTTCTATGGGGTCTTATAGACTCTTTACAAATCATTCAAA TTTGACCTTTGCTGCTATGCTTGTGTTATGTATACCTTTTGCATTGGAGACAATATTTTAACAAGGCACTTATGATGCAG AGAATAAGAATTGCGCTGCTAGAAGTGGCAGTCAATGTAGAAATGCGACGGGTACGACTTGTTGCTCCTGGAAAATGGAT GTTGTGCGCATCATTTATTCTCCCCAAAAGTGTAGCATTTGCTAAAACCGCAGTTGATACTTGA
CDS sequence (LotjaGi3g1v0079700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATGAGACCTTGGAGGTGTTACTGCCTGAGGGTATGGTTGTTCCATCAGCTTTTGAGACTGTTGGTCATATTGCACA CCTGAATTTGAGAGAGGAACATTTACCATACAAGAAGCTTATAGCAAAGGTTGTACTGGATAAAAATAAGCCAAAGATAA AAACAGTTGTGAACAAGATTGATTCCATTCAAAATGAGTACAGGACCATGCAGCTTGAGGTTTTAGCAGGAAACCACTCT CTTGTGACTACAGTAGTTGAGAATGGAATTCGCTTTCAGGTTGACTTAGCAACAGTATATTGGAATTCTAGGCTTGCAAC TGAAAGGCAAAGGCTTCTGAGTGGCTTTACACGAAATGATGTTATCTGTGATGTTTTCTCTGGAGTTGGTCCCTTAGCCA TATCTGCAGCAAGAATAGTTAAGCGTGTTTATGCTAATGACTTGAATCCATATGCCATTGAGTATCTGGAAAGAAATAGT GTTCTAAATAAACTTGAGAGGAAGATTAAGGTCTTTAACATGGATGGAAGAAGGTTCATTAAGGCTATATATGCCAGTGA TAAAGCTCAGTCCATCACACAAGTGGTTATGAACTTGCCAAATGATGCTGCAGAATTTCTAGATGCATTTCGGGGAATAT ACAAAGATAGACCTAAGGATGGGGAATTTACTTTGCCAATGATCCATGTTTATGGATTCTCCAAAGCACGAGATCCAGAA TTTGATTTTCATGAGAGAATAAGAATTGCGCTGCTAGAAGTGGCAGTCAATGTAGAAATGCGACGGGTACGACTTGTTGC TCCTGGAAAATGGATGTTGTGCGCATCATTTATTCTCCCCAAAAGTGTAGCATTTGCTAAAACCGCAGTTGATACTTGA
Protein sequence (LotjaGi3g1v0079700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNETLEVLLPEGMVVPSAFETVGHIAHLNLREEHLPYKKLIAKVVLDKNKPKIKTVVNKIDSIQNEYRTMQLEVLAGNHS LVTTVVENGIRFQVDLATVYWNSRLATERQRLLSGFTRNDVICDVFSGVGPLAISAARIVKRVYANDLNPYAIEYLERNS VLNKLERKIKVFNMDGRRFIKAIYASDKAQSITQVVMNLPNDAAEFLDAFRGIYKDRPKDGEFTLPMIHVYGFSKARDPE FDFHERIRIALLEVAVNVEMRRVRLVAPGKWMLCASFILPKSVAFAKTAVDT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 78 | 78 | 2.0E-25 | – | |
| PANTHER | 1 | 291 | 291 | 1.1E-197 | – | |
| PANTHER | 1 | 291 | 291 | 1.1E-197 | – | |
| Hamap | 1 | 281 | 281 | 19.949 | ||
| SUPERFAMILY | 15 | 281 | 267 | 2.13E-64 | ||
| Pfam | 18 | 217 | 200 | 9.3E-64 | ||
| ProSiteProfiles | 19 | 281 | 263 | 107.011 | ||
| Coils | 53 | 73 | 21 | - | – | |
| Gene3D | 81 | 281 | 201 | 2.5E-55 | – | |
| CDD | 122 | 181 | 60 | 1.81857E-5 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | TRNA (guanine-N1-)-methyltransferase activity | Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N1-methylguanine. | ||
| Biological process | TRNA methylation | The posttranscriptional addition of methyl groups to specific residues in a tRNA molecule. |
Expression pattern of LotjaGi3g1v0079700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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