Domain Predictions — View

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PF02475

Source: Pfam

Description

Met-10+ like-protein

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 11

Transcript	Name	Description	Predicted domains	Domain count
Lj3g3v0682870.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SAM (and some other nucleotide) binding motif [Medicago truncatula] gi\|124359271\|gb\|ABN05774.1\|	Domains G3DSA:3.40.50.150 IPR029063 IPR030382 PF02475 PS51684 PTHR23245 PTHR23245:SF35 SSF53335 cd02440	9
Lj3g3v0682870.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SAM (and some other nucleotide) binding motif [Medicago truncatula] gi\|124359271\|gb\|ABN05774.1\|	Domains Coil G3DSA:3.30.300.110 G3DSA:3.40.50.150 IPR025792 IPR029063 IPR030382 MF_03152 PF02475 PS51684 PTHR23245 PTHR23245:SF35 SSF53335 cd02440	13
Lj4g3v0153680.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Cicer arietinum] gi\|502149858\|ref\|XP_004507689.1\|	Domains G3DSA:2.120.10.80 G3DSA:3.30.1960.10 G3DSA:3.40.50.150 IPR003827 IPR006652 IPR015915 IPR029063 IPR030382 PF01344 PF02475 PF02676 PF13418 PS51684 PTHR23245 PTHR23245:SF31 SM00612 SSF111278 SSF117281 SSF53335 cd02440	20
Lj4g3v0336860.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: tRNA (guanine(37)-N1)-methyltransferase 2-like [Cicer arietinum] gi\|502151698\|ref\|XP_004508569.1\|	Domains G3DSA:3.40.50.150 IPR029063 IPR030382 PF02475 PS51684 PTHR23245 PTHR23245:SF36 SSF53335 cd02440 mobidb-lite	10
Lj4g3v0336860.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: tRNA (guanine(37)-N1)-methyltransferase 2-like [Cicer arietinum] gi\|502151698\|ref\|XP_004508569.1\|	Domains G3DSA:3.40.50.150 IPR029063 IPR030382 PF02475 PS51684 PTHR23245 PTHR23245:SF36 SSF53335 cd02440 mobidb-lite	10
LotjaGi3g1v0079700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	TRNA (guanine(37)-N1)-methyltransferase; TAIR: AT4G27340.1 Met-10+ like family protein; Swiss-Prot: sp\|F6H2F8\|TRM51_VITVI tRNA (guanine(37)-N1)-methyltransferase 1; TrEMBL-Plants: tr\|A0A151SVP0\|A0A151SVP0_CAJCA tRNA (guanine(37)-N1)-methyltransferase; Found in the gene: LotjaGi3g1v0079700	Domains Coil G3DSA:3.30.300.110 G3DSA:3.40.50.150 IPR025792 IPR029063 IPR030382 MF_03152 NON_CYTOPLASMIC_DOMAIN PF02475 PS51684 PTHR23245 PTHR23245:SF35 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53335 SignalP-TM cd02440 mobidb-lite	20
LotjaGi3g1v0079700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	TRNA (guanine(37)-N1)-methyltransferase; TAIR: AT4G27340.1 Met-10+ like family protein; Swiss-Prot: sp\|F6H2F8\|TRM51_VITVI tRNA (guanine(37)-N1)-methyltransferase 1; TrEMBL-Plants: tr\|A0A0B2R1V7\|A0A0B2R1V7_GLYSO tRNA (guanine(37)-N1)-methyltransferase; Found in the gene: LotjaGi3g1v0079700	Domains Coil G3DSA:3.30.300.110 G3DSA:3.40.50.150 IPR025792 IPR029063 IPR030382 MF_03152 PF02475 PS51684 PTHR23245 PTHR23245:SF35 SSF53335 cd02440	13
LotjaGi3g1v0079700.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	TRNA (guanine(37)-N1)-methyltransferase; TAIR: AT4G27340.1 Met-10+ like family protein; Swiss-Prot: sp\|F6H2F8\|TRM51_VITVI tRNA (guanine(37)-N1)-methyltransferase 1; TrEMBL-Plants: tr\|A0A151SVP0\|A0A151SVP0_CAJCA tRNA (guanine(37)-N1)-methyltransferase; Found in the gene: LotjaGi3g1v0079700	Domains Coil G3DSA:3.30.300.110 G3DSA:3.40.50.150 IPR025792 IPR029063 IPR030382 MF_03152 PF02475 PS51684 PTHR23245 PTHR23245:SF35 SSF53335 cd02440	13
LotjaGi4g1v0014700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	TRNA wybutosine-synthesizing 2/3/4-like protein; TAIR: AT4G04670.1 Met-10+ like family protein / kelch repeat-containing protein; Swiss-Prot: sp\|Q8W4K1\|TYW23_ARATH tRNA wybutosine-synthesizing protein 2/3/4; TrEMBL-Plants: tr\|G7JJ74\|G7JJ74_MEDTR tRNA wybutosine-synthesizing 2/3/4-like protein; Found in the gene: LotjaGi4g1v0014700	Domains G3DSA:2.120.10.80 G3DSA:3.30.1960.10 G3DSA:3.40.50.150 IPR003827 IPR006652 IPR015915 IPR029063 IPR030382 IPR036602 PF01344 PF02475 PF02676 PF13418 PS51684 PTHR23245 PTHR23245:SF25 SM00612 SSF111278 SSF117281 SSF53335 cd02440	21
LotjaGi4g1v0032800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	TRNA (guanine(37)-N1)-methyltransferase; TAIR: AT3G56120.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp\|F6HH45\|TRM52_VITVI tRNA (guanine(37)-N1)-methyltransferase 2; TrEMBL-Plants: tr\|A0A0B2Q1C8\|A0A0B2Q1C8_GLYSO tRNA (guanine(37)-N1)-methyltransferase; Found in the gene: LotjaGi4g1v0032800	Domains G3DSA:3.30.300.110 G3DSA:3.40.50.150 IPR025792 IPR029063 IPR030382 MF_03152 PF02475 PS51684 PTHR23245 PTHR23245:SF36 SSF53335 cd02440 mobidb-lite	13
LotjaGi4g1v0032800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	TRNA (guanine(37)-N1)-methyltransferase; TAIR: AT3G56120.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp\|F6HH45\|TRM52_VITVI tRNA (guanine(37)-N1)-methyltransferase 2; TrEMBL-Plants: tr\|A0A0B2Q1C8\|A0A0B2Q1C8_GLYSO tRNA (guanine(37)-N1)-methyltransferase; Found in the gene: LotjaGi4g1v0032800	Domains G3DSA:3.30.300.110 IPR025792 IPR029063 IPR030382 MF_03152 PF02475 PS51684 PTHR23245 PTHR23245:SF36 SSF53335 cd02440 mobidb-lite	12

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	9.09