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GO:0030488

View this GO term in other databases

Overview

Field Value
Namespace Biological process
Short description TRNA methylation
Full defintion The posttranscriptional addition of methyl groups to specific residues in a tRNA molecule.
Subterm of

Relationships

The relationship of GO:0030488 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCmah

Associated Lotus transcripts 22

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0057359.1
– PREDICTED: tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit trm6-like [Glycine max] gi|356562401|ref|XP_003549460.1|
GO terms
2
Lj0g3v0057359.2
– PREDICTED: tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit trm6-like [Glycine max] gi|356562401|ref|XP_003549460.1|
GO terms
2
Lj0g3v0086049.1
– Os04g0319600 [Oryza sativa Japonica Group] gi|297602457|ref|NP_001052454.2|
GO terms
3
Lj0g3v0263909.1
– PREDICTED: tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit trm6-like [Glycine max] gi|356562401|ref|XP_003549460.1|
GO terms
2
Lj1g3v2994560.2
– TRNA guanosine-2'-O-methyltransferase [Medicago truncatula] gi|357502123|ref|XP_003621350.1|
GO terms
2
Lj2g3v1119550.1
– PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trmt61a-like [Cicer arietinum] gi|502078105|ref|XP_004485841.1|
GO terms
3
Lj2g3v2585500.1
– PREDICTED: probable dual-specificity RNA methyltransferase RlmN-like [Cicer arietinum] gi|502097051|ref|XP_004490899.1|
GO terms
2
Lj3g3v0424170.1
– PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trmt61a-like [Cicer arietinum] gi|502078105|ref|XP_004485841.1|
GO terms
3
Lj3g3v0682870.2
– SAM (and some other nucleotide) binding motif [Medicago truncatula] gi|124359271|gb|ABN05774.1|
GO terms
2
LotjaGi1g1v0090900.1
– Dual-specificity RNA methyltransferase RlmN; TAIR: AT2G39670.1 Radical SAM superfamily protein; Swiss-Prot: sp|Q8DG98|RLMN_THEEB Probable dual-specificity RNA methyltransferase RlmN; TrEMBL-Plants: tr|G7KBR0|G7KBR0_MEDTR 23S rRNA m2A2503 methyltransferase; Found in the gene: LotjaGi1g1v0090900
GO terms
2
LotjaGi1g1v0508500.2
– TRNA guanosine-2'-O-methyltransferase; TAIR: AT5G15390.1 tRNA/rRNA methyltransferase (SpoU) family protein; Swiss-Prot: sp|O67577|TRMH_AQUAE tRNA (guanosine(18)-2'-O)-methyltransferase; TrEMBL-Plants: tr|G7L451|G7L451_MEDTR tRNA/rRNA methyltransferase SpoU family protein; Found in the gene: LotjaGi1g1v0508500
GO terms
2
LotjaGi2g1v0071700.1
– TRNA:m(4)X modification enzyme TRM13-like protein; TAIR: AT4G01880.1 methyltransferase; Swiss-Prot: sp|Q9NUP7|TRM13_HUMAN tRNA:m(4)X modification enzyme TRM13 homolog; TrEMBL-Plants: tr|A0A151QXE9|A0A151QXE9_CAJCA tRNA guanosine-2'-O-methyltransferase TRM13 isogeny; Found in the gene: LotjaGi2g1v0071700
GO terms
2
LotjaGi2g1v0270700.1
– TRNA (Adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A; TAIR: AT5G14600.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q80XC2|TRM61_MOUSE tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; TrEMBL-Plants: tr|V7AKG9|V7AKG9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0270700
GO terms
3
LotjaGi3g1v0036900.1
– TRNA (Adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A; TAIR: AT5G14600.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q6AY46|TRM61_RAT tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; TrEMBL-Plants: tr|V7AKG9|V7AKG9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0036900
GO terms
3
LotjaGi3g1v0079700.1
– TRNA (guanine(37)-N1)-methyltransferase; TAIR: AT4G27340.1 Met-10+ like family protein; Swiss-Prot: sp|F6H2F8|TRM51_VITVI tRNA (guanine(37)-N1)-methyltransferase 1; TrEMBL-Plants: tr|A0A151SVP0|A0A151SVP0_CAJCA tRNA (guanine(37)-N1)-methyltransferase; Found in the gene: LotjaGi3g1v0079700
GO terms
2
LotjaGi3g1v0079700.2
– TRNA (guanine(37)-N1)-methyltransferase; TAIR: AT4G27340.1 Met-10+ like family protein; Swiss-Prot: sp|F6H2F8|TRM51_VITVI tRNA (guanine(37)-N1)-methyltransferase 1; TrEMBL-Plants: tr|A0A0B2R1V7|A0A0B2R1V7_GLYSO tRNA (guanine(37)-N1)-methyltransferase; Found in the gene: LotjaGi3g1v0079700
GO terms
2
LotjaGi3g1v0079700.3
– TRNA (guanine(37)-N1)-methyltransferase; TAIR: AT4G27340.1 Met-10+ like family protein; Swiss-Prot: sp|F6H2F8|TRM51_VITVI tRNA (guanine(37)-N1)-methyltransferase 1; TrEMBL-Plants: tr|A0A151SVP0|A0A151SVP0_CAJCA tRNA (guanine(37)-N1)-methyltransferase; Found in the gene: LotjaGi3g1v0079700
GO terms
2
LotjaGi4g1v0032800.1
– TRNA (guanine(37)-N1)-methyltransferase; TAIR: AT3G56120.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|F6HH45|TRM52_VITVI tRNA (guanine(37)-N1)-methyltransferase 2; TrEMBL-Plants: tr|A0A0B2Q1C8|A0A0B2Q1C8_GLYSO tRNA (guanine(37)-N1)-methyltransferase; Found in the gene: LotjaGi4g1v0032800
GO terms
2
LotjaGi4g1v0032800.2
– TRNA (guanine(37)-N1)-methyltransferase; TAIR: AT3G56120.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|F6HH45|TRM52_VITVI tRNA (guanine(37)-N1)-methyltransferase 2; TrEMBL-Plants: tr|A0A0B2Q1C8|A0A0B2Q1C8_GLYSO tRNA (guanine(37)-N1)-methyltransferase; Found in the gene: LotjaGi4g1v0032800
GO terms
2
LotjaGi4g1v0165700.1
– Dual-specificity RNA methyltransferase RlmN; TAIR: AT1G60230.1 Radical SAM superfamily protein; Swiss-Prot: sp|A0LQM1|RLMN_SYNFM Dual-specificity RNA methyltransferase RlmN; TrEMBL-Plants: tr|I1KXG4|I1KXG4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0165700
GO terms
2
LotjaGi4g1v0165700.2
– Dual-specificity RNA methyltransferase RlmN; TAIR: AT1G60230.1 Radical SAM superfamily protein; Swiss-Prot: sp|Q3A2Z4|RLMN_PELCD Dual-specificity RNA methyltransferase RlmN; TrEMBL-Plants: tr|V7C8D7|V7C8D7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0165700
GO terms
2
LotjaGi5g1v0221400.1
– TRNA (Adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6; TAIR: AT2G45730.1 eukaryotic initiation factor 3 gamma subunit family protein; Swiss-Prot: sp|Q54UB1|TRM6_DICDI tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6; TrEMBL-Plants: tr|I1MY27|I1MY27_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0221400
GO terms
2

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0031515
Cellular component TRNA (m1A) methyltransferase complex 1 4.55