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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0079700 |
| Transcript ID | LotjaGi3g1v0079700.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | tRNA (guanine(37)-N1)-methyltransferase; TAIR: AT4G27340.1 Met-10+ like family protein; Swiss-Prot: sp|F6H2F8|TRM51_VITVI tRNA (guanine(37)-N1)-methyltransferase 1; TrEMBL-Plants: tr|A0A151SVP0|A0A151SVP0_CAJCA tRNA (guanine(37)-N1)-methyltransferase; Found in the gene: LotjaGi3g1v0079700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:8817045..8821986) extracted from Lotus japonicus Gifu genome v1.2.
TGTATATCTCCTTGTTATTTGATGTCCCATCTCTTAGTTTACAAATGGGACTGATCACAGTTATACTCATGTTTTCCTTT CTACTTATCATGAAAATTTGTTCAATCTGTGTTTTGGGTATGTGACATCTCTTCTGTTCACATATGACATGGCTCAAATT TTATCCTGTCTTCAGGCTGTCTTGAAGGAGTACACGGAAAAGAGTACAACTTTGACTTTTGAGCTAGTTAGATGCAGGCT AAAATTGTTTTATGATTACTGGCAGATGAATGAGGTATATTTTACCAAGACAATCTCCTATAAACTTAATCTGTTTTTGG CTGTACGTGCATGATAAATTGCACTCTTCACTGTCATAATTAACTTAGTGGGATGGGCGTTTCAAAACAAAGTAATATGG TAGTTTTGTTTCATTTATTGGAGAGTTGAACTACAGAGAGGATAGTCCTATAGCTGTTAAAATGTAAAATGTACTCTTTG CTGTCATGTTTAATTTAAGTGGAACAGGTGCTTCAAAACAAAGTAATATGGTTTTTGTGTTTTAGTTATTGGAGAGTTGA ATTAGATAGAGGATAGTCTGATAGCTGTATCAATTTTAACACAACTAAAGATTTTCGTTAGTTTGTGAAAATTGGATTTT ACATTATAACCAACTGCTGATTATCGTCTACAATTATTTTTCAACTCCAAATCTTTATTTAAGTATGAGGCCAAGAAACT TGTGTGCATGTGTTCGTATTTCCATTGATTTTGTTTATTCAATTTCAAAGTGTGAGTATAACATAAATTGTGGGTCTTAT ATGATTGCTGCAGACCTTGGAGGTGTTACTGCCTGAGGGTATGGTTGTTCCATCAGCTTTTGAGACTGTTGGTCATATTG CACACCTGAATTTGAGAGAGGAACATTTACCATACAAGAAGCTTATAGCAAAGGTTCTTGTTTGGAAATAATTTTGGTTA CCATGTTTAAATGTGTAAAGTAAGGTTGTATTGCAAATTCTTATCTGTGTTAATGTATGAAATTGCGTTCAGGTTGTACT GGATAAAAATAAGCCAAAGATAAAAACAGTTGTGAACAAGATTGATTCCATTCAAAATGAGTACAGGACCATGCAGCTTG AGGTTTTAGCAGGAAACCACTCTCTTGTGACTACAGTAGTTGAGAATGGAATTCGCTTTCAGGTTGACTTAGCAACAGTG TATGCTCTATTTCCATCATTGACCAATGTATAGCAATTGACAGGCTTGCTTTACTTGTTGCTCAATTAATATCATTTCAT GAACATGAAGTTTGTTTAACAGTCATAGTTATGTCTTAATTTGATCTTCTCATTTGTATTTCTGTACAAGTAGCACCATT ATACCATGAAAAGGCTATTATACCCTTACCAGTTCTGAAAGTTGCATGAAGGTTTGAAGCGATTAAGGAATCTTGATTTT GACTTATATGTTGAAATTTTTTGTATCATATTTTCTCAGGCAGGTGTGGGTCTCTGCCATTTCTGTAAATATTGATGCAG ATATAGTTATGTGTATTGATACCTTCATGTATATGTTATATGTGGAAAAAAATCGTGTGAACCTGCAATGTTACTTCCTA CATTTTAGGCTGTCATGTTTTGAATGTTATACGTTTAAAATTTGACCTTGGGGACCATTTATCGTTGCTTCTGAATCAAT TACTTGTAGCACCTATTCATTGAATCTAGAAATATAACATGACTATTTTTTTTTCAAATTTCAAAATATACTCTAGAGAG AGAAATTAGGTGAAAGAATTAATGTAAAAGTATCAGTTATCAATATTTTTTCATTTTCTTTCTATGCAGATATTGGAATT CTAGGCTTGCAACTGAAAGGCAAAGGCTTCTGAGTGGCTTTACACGAAATGATGTTATCTGTATGTAGTACCTTATTGTT AAGATTATTATATTAGCCTACCTATGCTAGTTATACTTCACTTTTCATGTCTTCTGATCATTGTCTTTCCCATCCCAATT GTTGAAGTTGGCTGGTCACAGCAACCTGATGTCATACACTGATGATGAAATTTGGTTCTGTTAGAACTGGTAGATCTAGG TTAACAGTAATTGGGGAAAAAATCAAGAACAGAGAAGGAAAATGCAATTGAGATCAGAGAAGATTTGGATTTCTTGAAGA ACAAGCTTGGATACAGTTTGGAAGAGAAACCGCTTTCTCTCTCTAGCTAACTGAATTCCTCAATTCAGTTCAAGACTCAA CTGTTTCCAAAACTAACTTCTCACTGACAGTAAAGCTATTTATATCCTAGTTTGCTATATTACAAACTAGTCCTTTAAGA AAGTATTTATTCTAAGTCAGTCCTAAACATGGACTAACTAATCCTTATTTTGTCTCCTAACATAGACTTGCGAGACAATA GGTCTACCCTTGATCCTAACAGGTTCTTTTTTCTTTGCTATGGGATTTTGAATAAATGAACATATTGTGACCATACAATA ATACATGGGTGATTGAGATTTAAAGTGGTTTAGTGGTCACATCTCTAATGATAAACACTCCTCTCACCTGTTACATTCCA TATGTGTGTGTGTGTGTAAAGAGCGAGACAGAGGGAATATCTTAGTGGTGGCATAAAGAGGCAATGCTTGAGGGCTCATT GTGGATTTGATATGCAGTATAACTGTATGAGTGAGAATGGTGAAAAATGCTTGGAGTTTAAATATTGTCTGATGGTAATT TTAACTTCATAACTTATGGCCTTGATTTAAGAAAAAGGAAAATGGGAACTGTTAAAATTGAAGTTCTTATGATGCAAATT GCAAAGTCTGAATGAAAATGAAATTGAAAGCAAGAATTAATGGACCACTGTTGAATATGGTGCAAACATGTCCTGGTTGG TTCTTCAAAATCTTTCTTTACTTGCAATAACATATGTTTGTATCTTTAGTTGCTGAAATGTTAAATATGTGCTTCTGTAT GTTATTTATTAAGAAAAATATCCGTGACTTGCTTACGCATGAAACATGAACTTCATTATATATTCAATTGACAGGTGATG TTTTCTCTGGAGTTGGTCCCTTAGCCATATCTGCAGCAAGAATAGTTAAGCGTGTTTATGCTAATGACTTGAATCCATAT GCCATTGAGTATCTGGAAAGAAATAGTGTTCTAAATAAACTTGAGAGGAAGATTAAGGTAAGGTTGCTTGTTGAGTGACT ATCTTCTATTCCTCTTGAAGATGTTTTATCAGCTTTTATATATGCAAAAATAAAAATCTAACGCTATGTTAGAAATGTAT TCCAATTTAGGATTTGTAGATGCTATTTCTTGGTTTATATTAAAGTATTGTAAATTAATTTTTTCCGCAACATTTTTTTT TGGAAATTTTTACTTTTTTTAAAGTGTTATGGATTATCTTGAATGTTTTATCATCATTGAAATGAAACAGATCATTTGTT TTCATTTCAAAGAAACACTGAAATGCAAAACATTGAAATATTGTGTTGTCTGATACAAGTGTCCAATACTTGGCTGCACA CAACTCCTTTCTTGAAATGTCCATGCTTCATTGGATGCTGGTGGCTAATGATTAAAAAGAATGAGTTACATGATACGTCT TTTTCACATGTAGAACTGAGACATAAGTTGCATTTGACCCTTTCTTTATGGAATTTTCTACCAAATTAAGGATTTCGATT GTTTCTCTAGGTCTTTAACATGGATGGAAGAAGGTTCATTAAGGCTATATATGCCAGTGATAAAGCTCAGTCCATCACAC AAGTGGTTATGAACTTGCCAAATGATGCTGCAGAATTTCTAGGTTGCTTTTTCTTTCTGGGTCATTCTTTCTTTATCTGT ACTATATTTTTTTATATCCATATGTTTGATTTGATCTATTGCACACATCTTTTCTGCATGATATAGTTAGATATGTTAGG TTTTTCAGTTTTTCCATAATCTTTTCCTAAGTCATGGATGATGACGTGTCTAACTTGGACTGTTGTTTCAAGTATTTCTG ATTAGAGTGAGGGTTGGGTAGGTCCTACTTTTGATCCCTCCCTCATGCATTATAGTTTATATATAAAGACCTGCCATCAT GCCTAGATGTTGAAAGGAATGGCATGAGACCAAAAAATGCTGTATGTCTCAATAGGTTGAAGAACTTAGTTAGAGAATCT GCACTGCAGTATCTGATGTTTTCTATTGAATTGAACTACACAAACAGAGTTGTAGTTCAACAATCAGCTAGTGAGTAAAA GCATTTATACTTGCACCAACAATCCTACTCCTTTGTTTTTGCATGTGATAACCTTACTTCATAATTGCTGGGTATAGGGT CGTTGGTTTTATGATTGTTCTTGTGTTAGTGGAGAACTAATTTGTCTTTCAATATGAGATTATTGATTCGAGTATTATTG CTTGGATGAGTTGAACTCATGCAATGATCAGTAGAGTTCTGAGTGGCTTTAGTCATGCTGTTATGGTTTTACAGTTCCTT TCCGTATGGTTAAACTTCTTATGATAGCCGGATTTAATTTCTGGATTGTCTACTTCCCCTGCAGATGCATTTCGGGGAAT ATACAAAGATAGACCTAAGGATGGGGAATTTACTTTGCCAATGATCCATGTTTATGGATTCTCCAAAGCACGAGATCCAG AATTTGATTTTCATGAGGTTGGTTACCGAAACTCTAAACTTCTATGGGGTCTTATAGACTCTTTACAAATCATTCAAATT TGACCTTTGCTGCTATGCTTGTGTTATGTATACCTTTTGCATTGGAGACAATATTTTAACAAGGCACTTATGATGCAGAG AATAAGAATTGCGCTGCTAGAAGTGGCAGTCAATGTAGAAATGCGACGGGTACGACTTGTTGCTCCTGGAAAATGGATGT TGTGCGCATCATTTATTCTCCCCAAAAGTGTAGCATTTGCTAAAACCGCAGTTGATACTTGA
CDS sequence (LotjaGi3g1v0079700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGACTGATCACAGCTGTCTTGAAGGAGTACACGGAAAAGAGTACAACTTTGACTTTTGAGCTAGTTAGATGCAGGCT AAAATTGTTTTATGATTACTGGCAGATGAATGAGACCTTGGAGGTGTTACTGCCTGAGGGTATGGTTGTTCCATCAGCTT TTGAGACTGTTGGTCATATTGCACACCTGAATTTGAGAGAGGAACATTTACCATACAAGAAGCTTATAGCAAAGGTTGTA CTGGATAAAAATAAGCCAAAGATAAAAACAGTTGTGAACAAGATTGATTCCATTCAAAATGAGTACAGGACCATGCAGCT TGAGGTTTTAGCAGGAAACCACTCTCTTGTGACTACAGTAGTTGAGAATGGAATTCGCTTTCAGGTTGACTTAGCAACAG TATATTGGAATTCTAGGCTTGCAACTGAAAGGCAAAGGCTTCTGAGTGGCTTTACACGAAATGATGTTATCTGTGATGTT TTCTCTGGAGTTGGTCCCTTAGCCATATCTGCAGCAAGAATAGTTAAGCGTGTTTATGCTAATGACTTGAATCCATATGC CATTGAGTATCTGGAAAGAAATAGTGTTCTAAATAAACTTGAGAGGAAGATTAAGGTCTTTAACATGGATGGAAGAAGGT TCATTAAGGCTATATATGCCAGTGATAAAGCTCAGTCCATCACACAAGTGGTTATGAACTTGCCAAATGATGCTGCAGAA TTTCTAGATGCATTTCGGGGAATATACAAAGATAGACCTAAGGATGGGGAATTTACTTTGCCAATGATCCATGTTTATGG ATTCTCCAAAGCACGAGATCCAGAATTTGATTTTCATGAGAGAATAAGAATTGCGCTGCTAGAAGTGGCAGTCAATGTAG AAATGCGACGGGTACGACTTGTTGCTCCTGGAAAATGGATGTTGTGCGCATCATTTATTCTCCCCAAAAGTGTAGCATTT GCTAAAACCGCAGTTGATACTTGA
Protein sequence (LotjaGi3g1v0079700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLITAVLKEYTEKSTTLTFELVRCRLKLFYDYWQMNETLEVLLPEGMVVPSAFETVGHIAHLNLREEHLPYKKLIAKVV LDKNKPKIKTVVNKIDSIQNEYRTMQLEVLAGNHSLVTTVVENGIRFQVDLATVYWNSRLATERQRLLSGFTRNDVICDV FSGVGPLAISAARIVKRVYANDLNPYAIEYLERNSVLNKLERKIKVFNMDGRRFIKAIYASDKAQSITQVVMNLPNDAAE FLDAFRGIYKDRPKDGEFTLPMIHVYGFSKARDPEFDFHERIRIALLEVAVNVEMRRVRLVAPGKWMLCASFILPKSVAF AKTAVDT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 326 | 323 | 7.4E-213 | – | |
| PANTHER | 4 | 326 | 323 | 7.4E-213 | – | |
| Hamap | 4 | 316 | 313 | 22.992 | ||
| Gene3D | 34 | 113 | 80 | 1.3E-25 | – | |
| SUPERFAMILY | 50 | 316 | 267 | 3.29E-64 | ||
| Pfam | 53 | 252 | 200 | 1.3E-63 | ||
| ProSiteProfiles | 54 | 316 | 263 | 107.011 | ||
| Coils | 88 | 108 | 21 | - | – | |
| Gene3D | 116 | 316 | 201 | 3.6E-55 | – | |
| CDD | 157 | 216 | 60 | 1.41558E-5 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | TRNA (guanine-N1-)-methyltransferase activity | Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N1-methylguanine. | ||
| Biological process | TRNA methylation | The posttranscriptional addition of methyl groups to specific residues in a tRNA molecule. |
Expression pattern of LotjaGi3g1v0079700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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