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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0089300 |
| Transcript ID | LotjaGi3g1v0089300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptidylprolyl isomerase; TAIR: AT3G25230.1 rotamase FKBP 1; Swiss-Prot: sp|Q38931|FKB62_ARATH Peptidyl-prolyl cis-trans isomerase FKBP62; TrEMBL-Plants: tr|A0A151T0E7|A0A151T0E7_CAJCA Peptidylprolyl isomerase; Found in the gene: LotjaGi3g1v0089300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:10095197..10100134) extracted from Lotus japonicus Gifu genome v1.2.
CTTAAACCCTTGATTCTGGAAACTACCACACTGAGCCCTCGCTAGTAGAACTCTCTGGAACCCTGATTTCCCTTTATACC CTCTTCTCTCACACCACCGTTTCCACTTGCTTCACACTTCTTCCAATATCATCATCACCGTAACCGTAACCGCTTTTCAC GCTCTCTTTCCACATTTCGTTATTCGGAAACCATGGACGAAGATTTCGATATTCCGGCGGCGGGGAACGACGACTTCGAC TTCGCCGGCGCCGACGGCGGCAATCCGATGTTCAAGGTCGGCGATGAGAAGGAGATTGGGATTCAGGGCTTGAAGAAGAA ACTCATCAAGGAAGGTGAAGGTTGGGATACCCCTGATGCTGGTGATGAAGTCCATGGTACCCTTCTTCTTCTTCCTCTCT CTGTTTGTTACATTCGTTGCTTCGATTAGATTTTGCTGTGAATGCGCTTAATCTTGGTTTTTCTATGGTTTTTTCCGATT TGCAGTTCATTATACTGGAACATTGCTTGATGGCACCAAATTTGATTCCAGCAGAGATAGGGGAACCCCTTTCAATTTCA CGCTTGGACAAGGTGAGTGCACTCTTGAATTGCCCATTGTAATTGAATGTGTTAGATCCATTTCTCATGTTAGTTTTATT AGATGGTTTATTTGACTCTTTTTCTGAATTCACTTGTTACTCTATTCTAGTTGCATTTACAATTTTACATGTACTTTGTG TGTTTACTAGTATTGGGGGGAAGGGAAATGAAGGGATTTGCAGGGTGAAGGGTCATGTTCAAATCCTGGCGAATACTAAC AATTAACAACTAACATTTGCGTATAAAAAATGTGTTTACTATTATTGCTTCTTTTTGCTTTATTTTTTGGTGGGGTAAAT TGTTATGGTTGGATTGAATGTTTGCTAATACTGTTTGGCAAACACAAGCTACATTAGGTGTTACTCTTACAAATTACTAA CAGGTTAATTGTTACTTTGGCAATGCAGGGCAAGTTATTAAGGGATGGGATGAAGGGATTAAAACTATGAAGAAAGGCGA AAATGCTCTTTTCACAATCCCAGCTGAACTAGCTTATGGTGAATCCGGTTCTCCTCCAACGATTCCCCCCAATGCGACTC TCCAATTTGATGTTGAGCTGCTGTCTTGGACTAGTGTGAAGGACATATGTAAGGATGGAGGTATTTTTAAGAAGATACTA TCCGAGGGGGAGAAATGGGAGAACCCCAAGGATCCTGATGAAGTTTTAGGTATGCATGTTTCTGATGTCTTTAATTTTTT ATTTGATTAGTGATTACTATGTTAGTTAACTCGTGTTTACTATAATTTGTACTGAACTCTTGGTGTTGCAGTTAAGTATG AAGCGCGTCTTGATGATGGAACGCTTGTATCAAAATCGGATGGAGTTGAGTTCACAGTCAAAGAAGGTCAGTGCCTACAA AATCTGTTAGTGTCTCTCGCTCTCTTGTGATTTTGCTTTTCATTGGCTCTTACATTGATGTTTGCAATGTGGCAGCTCAT TTTTGTCCTGCATTGTCAACGGCTGTTAAAACCATGAAGAAGGGAGAAAAAGTGATTTTGACAGTGAAGCCACAATGTGA GTTTTCAACAGATTGTTTTTGTAAATGGTGAATATTACCCTTGATATTATTTTCCTTTAATTTTTAATAGAAGATTTATG CTTTTCTTTGTTGTGTTATAGATGGGTTTGGTGAGAAGGGGAAGCCGGCGCATGGTGATGAAGGTGCTATTCCACCTAAC GCAACATTGCAGATTACTCTTGAGTTAGTTTCTTGGAAGACTGTTACAGATGTAACTGATGACAAGAAGGTCGTTAAGAA GATCCTCAAGGAAGGGGAAGGATTTGAGCGTCCAAATGAGGGGGCTGTTGTGAAATGTGATTGCTCATTACCTTGAATGA TGACTTTTCATTTGTTTATAGCTAGTGCATGGCTTCTCATTTGTTTTGACCTCATTTTTATCTTTCCAGTGAAACTGATT GGGAAGCTTCAAGATGGTACTGTCTTTTTGAAGAAGGGCCATGATGATGAAGGGGAGCTGTTTGAATTCAAAACAGATGA GGGTAACCTGAAATGTCCCTGTGTTCTCCACCATCTCCTGCAAATTTATTTTATGCTAACTAGTTTGAATATTTAATGTG TTGAGCAGAGCAAGTAATTGATGGGCTTGATAGAGGTGTGGTGACTATGAAGAAGGGTGAGGTAGCATTGTTGACTGTTG CGCCTGAGTATGCTTTTGGTTCATCACAGTCCCAGCAGGAATTGGCAGTGGTTCCTCCTAACTCCACCCTGTATTATGAG CTTGAGCTAGTGTCATTTGAGAAGGTAAGTTGATAACTGGATGATGTCAGAAATTGTACATTGATCTTATATACGTTTCA ATTTTGGTTATTGAGATCTATTATTGAAAAGTAGTGTGCTAATGACCATGCAATTATAGTTTGTCAAATTAGACCAGATT AAAGGAGATATTTATAACTAAAGCACTTTGCCTCTTATTTCTAATTTTTTTGGCTATAAATTCCAATTTTCATTTTCCCT CCTCCCTGACTTTGTGCCTGTTTTTATGTCTGTACATATTAATTAATTACAACCTGTCATTTTTTTCTTACTGAATCATC ATTATGTGTGATCGGTTTGAGTGCCAAAAGGTCTTAGATTTTCTCATCCTATATGAACTGAGGAGTGCACTTTAGTTGGA TAAACTGATAGGATAGTTGCTTATTGAAAAATTAGTGATTGAGGTTGTGATAAAAATGCTTATATAAAAGAAATATAAAC TAAAAAAAACAGTTTGAATTAAGTCAGTATTCTTTAGTCTATGTAAAGCATCTATATGTGTTCTTAACTTCGCCATCATT ACTGCTTTTGTTTATTTGCAAAGCTGCTTTTCTTGGTCCAAGGACTTTGGGAAGTTTCTTTTATTTTTTATTTTTTTGAA TGATGAGTTGATGACAAATGTTTATATTTTGTTTCCTGATATTTACTGAATATATGCATTTAGGAGAAGGAATCTTGGGA CATGAACACTCCAGAGAAGATAGAGGCTGCTGGTAAGAAGAAAGAAGAAGGGAATGCATTGTTTAAAGCTGGTAAATATG CAAGAGCTTCTAAAAGATATGAGAAGGTAAAGAGTAAGAGTATTCTATATATTGACTTCCTTCCATTTCAATGCATTCTC TCAGACTTTTTTGGTAACCATACCACAGGCTATCAAGTACATTGAGTATGATACCGCCTTTAATGAGGAGGAGAAGAAAA ATTCCAAGGCCTTGAAAATTGCTTGCAATTTGAACAATGCAGCATGCAAGTTGAAGTTGAAAGATTATAAACAAGCTGAG AAATTATGTACAAAGGTGTGAATGCTGTCCTGTCTCTTATATTGTAGTTGTAGAAACTTTACTTGTTTGCTCACTAACAT TAACTAATTTTAACCTGGGCAAGCAGGTTCTGGAACTTGAGAGCACAAATGTGAAGGCTCTCTATAGAAGGGCGCAGGCA TATATCCAGTTGGCTGACTTGGATTTAGCTGAATTTGATATCAAGAAAGCTCTTGAGATTGACCCTAACAACAGGTATAT ATTTTGAATGAATTTCTAAAATTATTAATGGCCTCCTTAGATGGGTAAATCCTGCCTGCGTATGGTTCAGACATCAGTTG TATGTATTTTGGACTATTTATCTTTTCTCTGTTGTGATTTTTATTGTAAAATGACTAATCTAATTCCTTTTGATATATCA ATAGGGATGTCAAGCTGGAGTATAAGACTTTGAAGGAAAAGATGAAGGAGTTCAATAAAAAGGAAGCAAAATTTTATGGA AATATGTTCAGCAAAATGAGCAAGCTAGACTCTCTCGACAGTAATGTGAGTATTCCATTTGGCAACTTCTAGCGGTTTTC TAGACAAACTAGTTGTGTATGAAATAGGTCCTGAACGTAGTCCTTTATCTAAATAATAGGACAAACTCAGAAAAAAAAAT GTTCAAATTCTGTCATAGTTGAATTGAATTTTCATAGTATTCTTATAAAAAAGGCAAAGAAGAATCTTTTATTTTTTTAT TTAGGAGAAAAGTAACATGTATATAATTTCGAATAATATATTCGTTGTATTTAACCTGTTCTTTCTACTGCAAAAATAAA TGTGCCACAATATTGACACGAAGTCTTTGAACTCGGAATGTAGTGTTCTGTAATGTTGCTTCTCATTGTGATTAGTGGGA GAAAGTTTATGTTATAGTTATTTTTGCGTGTCTAATATGCTCATTCATTTATCATTGCAGAAACCAGCTTCCAAGGATGC CCAACCCATGAGTATCGACAGCACGGCATAATAAGCACAAGAGCTCCATATGATCTGGAGTCTGCTTCAATGTTTGTTTT TTGACATTTGGATTATGATGGATTTATGGCATGTCAACAGGGATAACTTTTATTCAGTTGTTGAGAATGGGGAAAAATGT GTTGTCAAATTTAAATATTAATGGATAGTGACATTTTGCCATTCTGGTTATTGTGTTAAAGTGTGCTTTAGTGTCTTGTT TTGATCTAATCGTTTTGCTATATGAAGTTGGTTCTGCGTATGAATTGATTTGGTGTCACTGATCTGTGTTTCTGTAATAT GATTAATCATCAACAATGATGCAAATAAGTTATACTGATCCTAGTAACAAGTTGAAGGAAGTGTCATGAGGAGGTTGGGA GAATATGAATTTGTCTAGACTAAATTTTTTTCATGGATCACCTGACAGTTTATTTAAATGGCTCAGGCTCTTTTATGAAA TGTGGTATTGTGAGCAAGATGATGATCACCATAAACCGGTGTGGAGATAATGAAGAACATAGAATAGAGCCAACACGTGT GGCTGTTATTTTTGTTTGTCAATGGTTCATAATTCATTCAAAACTCAAAAAAGTTGCT
CDS sequence (LotjaGi3g1v0089300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGAAGATTTCGATATTCCGGCGGCGGGGAACGACGACTTCGACTTCGCCGGCGCCGACGGCGGCAATCCGATGTT CAAGGTCGGCGATGAGAAGGAGATTGGGATTCAGGGCTTGAAGAAGAAACTCATCAAGGAAGGTGAAGGTTGGGATACCC CTGATGCTGGTGATGAAGTCCATGTTCATTATACTGGAACATTGCTTGATGGCACCAAATTTGATTCCAGCAGAGATAGG GGAACCCCTTTCAATTTCACGCTTGGACAAGGGCAAGTTATTAAGGGATGGGATGAAGGGATTAAAACTATGAAGAAAGG CGAAAATGCTCTTTTCACAATCCCAGCTGAACTAGCTTATGGTGAATCCGGTTCTCCTCCAACGATTCCCCCCAATGCGA CTCTCCAATTTGATGTTGAGCTGCTGTCTTGGACTAGTGTGAAGGACATATGTAAGGATGGAGGTATTTTTAAGAAGATA CTATCCGAGGGGGAGAAATGGGAGAACCCCAAGGATCCTGATGAAGTTTTAGTTAAGTATGAAGCGCGTCTTGATGATGG AACGCTTGTATCAAAATCGGATGGAGTTGAGTTCACAGTCAAAGAAGCTCATTTTTGTCCTGCATTGTCAACGGCTGTTA AAACCATGAAGAAGGGAGAAAAAGTGATTTTGACAGTGAAGCCACAATATGGGTTTGGTGAGAAGGGGAAGCCGGCGCAT GGTGATGAAGGTGCTATTCCACCTAACGCAACATTGCAGATTACTCTTGAGTTAGTTTCTTGGAAGACTGTTACAGATGT AACTGATGACAAGAAGGTCGTTAAGAAGATCCTCAAGGAAGGGGAAGGATTTGAGCGTCCAAATGAGGGGGCTGTTGTGA AATTGAAACTGATTGGGAAGCTTCAAGATGGTACTGTCTTTTTGAAGAAGGGCCATGATGATGAAGGGGAGCTGTTTGAA TTCAAAACAGATGAGGAGCAAGTAATTGATGGGCTTGATAGAGGTGTGGTGACTATGAAGAAGGGTGAGGTAGCATTGTT GACTGTTGCGCCTGAGTATGCTTTTGGTTCATCACAGTCCCAGCAGGAATTGGCAGTGGTTCCTCCTAACTCCACCCTGT ATTATGAGCTTGAGCTAGTGTCATTTGAGAAGGAGAAGGAATCTTGGGACATGAACACTCCAGAGAAGATAGAGGCTGCT GGTAAGAAGAAAGAAGAAGGGAATGCATTGTTTAAAGCTGGTAAATATGCAAGAGCTTCTAAAAGATATGAGAAGGCTAT CAAGTACATTGAGTATGATACCGCCTTTAATGAGGAGGAGAAGAAAAATTCCAAGGCCTTGAAAATTGCTTGCAATTTGA ACAATGCAGCATGCAAGTTGAAGTTGAAAGATTATAAACAAGCTGAGAAATTATGTACAAAGGTTCTGGAACTTGAGAGC ACAAATGTGAAGGCTCTCTATAGAAGGGCGCAGGCATATATCCAGTTGGCTGACTTGGATTTAGCTGAATTTGATATCAA GAAAGCTCTTGAGATTGACCCTAACAACAGGGATGTCAAGCTGGAGTATAAGACTTTGAAGGAAAAGATGAAGGAGTTCA ATAAAAAGGAAGCAAAATTTTATGGAAATATGTTCAGCAAAATGAGCAAGCTAGACTCTCTCGACAGTAATAAACCAGCT TCCAAGGATGCCCAACCCATGAGTATCGACAGCACGGCATAA
Protein sequence (LotjaGi3g1v0089300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDEDFDIPAAGNDDFDFAGADGGNPMFKVGDEKEIGIQGLKKKLIKEGEGWDTPDAGDEVHVHYTGTLLDGTKFDSSRDR GTPFNFTLGQGQVIKGWDEGIKTMKKGENALFTIPAELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIFKKI LSEGEKWENPKDPDEVLVKYEARLDDGTLVSKSDGVEFTVKEAHFCPALSTAVKTMKKGEKVILTVKPQYGFGEKGKPAH GDEGAIPPNATLQITLELVSWKTVTDVTDDKKVVKKILKEGEGFERPNEGAVVKLKLIGKLQDGTVFLKKGHDDEGELFE FKTDEEQVIDGLDRGVVTMKKGEVALLTVAPEYAFGSSQSQQELAVVPPNSTLYYELELVSFEKEKESWDMNTPEKIEAA GKKKEEGNALFKAGKYARASKRYEKAIKYIEYDTAFNEEEKKNSKALKIACNLNNAACKLKLKDYKQAEKLCTKVLELES TNVKALYRRAQAYIQLADLDLAEFDIKKALEIDPNNRDVKLEYKTLKEKMKEFNKKEAKFYGNMFSKMSKLDSLDSNKPA SKDAQPMSIDSTA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 25 | 551 | 527 | 0.0 | – | |
| PANTHER | 25 | 551 | 527 | 0.0 | – | |
| Gene3D | 30 | 145 | 116 | 3.3E-53 | – | |
| SUPERFAMILY | 36 | 158 | 123 | 3.73E-46 | – | |
| Pfam | 53 | 142 | 90 | 1.9E-34 | ||
| ProSiteProfiles | 57 | 145 | 89 | 32.909 | ||
| Gene3D | 146 | 261 | 116 | 3.6E-36 | – | |
| SUPERFAMILY | 149 | 265 | 117 | 6.29E-25 | – | |
| Pfam | 169 | 258 | 90 | 1.4E-16 | ||
| ProSiteProfiles | 173 | 262 | 90 | 19.4 | ||
| Gene3D | 262 | 391 | 130 | 1.7E-35 | – | |
| SUPERFAMILY | 267 | 400 | 134 | 8.45E-31 | – | |
| Pfam | 286 | 380 | 95 | 4.1E-20 | ||
| ProSiteProfiles | 290 | 383 | 94 | 21.925 | ||
| SUPERFAMILY | 389 | 548 | 160 | 3.35E-31 | ||
| Gene3D | 392 | 555 | 164 | 9.2E-55 | ||
| SMART | 400 | 433 | 34 | 19.0 | ||
| ProSiteProfiles | 400 | 433 | 34 | 7.08 | ||
| ProSiteProfiles | 407 | 516 | 110 | 15.054 | ||
| ProSiteProfiles | 449 | 482 | 34 | 5.34 | ||
| SMART | 449 | 482 | 34 | 0.04 | ||
| Pfam | 483 | 516 | 34 | 1.5E-7 | ||
| ProSiteProfiles | 483 | 516 | 34 | 10.502 | ||
| SMART | 483 | 516 | 34 | 1.8E-6 | ||
| Coils | 516 | 536 | 21 | - | – | |
| MobiDBLite | 551 | 573 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0089300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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