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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0127600 |
| Transcript ID | LotjaGi3g1v0127600.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GTP 3',8-cyclase; TAIR: AT2G31955.1 cofactor of nitrate reductase and xanthine dehydrogenase 2; Swiss-Prot: sp|Q39055|CNX2_ARATH GTP 3',8-cyclase, mitochondrial; TrEMBL-Plants: tr|I1KTQ5|I1KTQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0127600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:15687198..15692337) extracted from Lotus japonicus Gifu genome v1.2.
TTGCACGTTTTTGTCTGACTTGCCCGTCGTCACCCCATGATTAGCTGTAACCTTAAGACGCCCAAAACCAACACGGCAAC ACCTCAAAACAGAACTCTCATCATTTCACTCTCACTCTTTCTTATCTCTCTCTCTTTCCTTCTTCATATATAAATGTTTG GATTCTTTGGTTGTTAGACAATAGACATCATCTTCAGTTGTCACAAAAACAAAAACTGTTCCTACTTCAACTCATTCTTC ACTCTTTCTCTACTGATTCATTGTTTCTGCGTCAATGATGTGGCGCTACTTCTCCAAATTCATTCATTCTCCTATTGGAT TCAACCCTTCAAACTCCTTACCGGTATGAACTCTCTCACTTTCTGATTGTGGTTTGATTGAATATATACACAACAATGTT AGCTGATTCTCCAACTCTGATGATAAATATTACTACTTATAAACTTGAAACTTGTAATCCCCTAGTTCTATCAATAACTT GTGAAAATCAGCCAATTTCTTGTGCCATTGTGATGTCAATTGAGTATTTATTACTATTGAAGGATTAATTGTATCAATTC AACAATACCCATTTGCATGCAGGTGAGGATTGTTAATTTTTTCCTTTCAAGGGATTGTGTCTAATAATGTTAGTTAACTA ATAGCTAGATCTCATGCTGTGTGTATTAATCTGGGTTCAAATTGTTCTTATGATAACAAATTTTCTTAAAGCAGGTGAAT TGTGAGATGGGGTCTTACTTTGCTGCCAGAAATTGTAATCTTCAAGGTTTATTGAATGGAAGCTTGCATGAGTATTCCAC AGGGACTTTTGCAGCATCTAGTGCTTCATTGTCTGAAGATCAGCCAAAAGATAGTTCTGTTTCTGATATGTTAGTGGATT CATTTGGAAGGCTTCACACTTACTTGAGAATATCTTTAACCGAGAGGTGCAATTTAAGGTGTCAGTATTGTATGCCAGCA GAAGGTGTGGAACTCACTCCTACCCCTCAGATTTTAACAAAGGCCGAGATTCTGCGGTTGGCGGATCTGTTTGTAAGCTC TGGTGTGAATAAAATACGTTTGACGGGTGGCGAGCCGACTGTCAGAAAGGATATTGAGGACATATGTTTGGAATTGTCAA ACTTGAAGGGACTTAAGACATTGTCCATGACTACAAATGGTATTGTTCTGGCAAGAAAACTTCCAAAGCTTAAAGAATGT GGTCTTACTTCTTTGAACATTAGTTTGGACACTCTGGTGCCAGCAAAGTTTGAGTTAATGACGAGGCGCAAAGGGCATGA AAAAGTAATGGATTCGATTAATGCTGCGATAGATCTTGGATATAATCCGGTTAAGGTATTTTTTTGGTCTTCTTGCCAAA TTAAGTTATTCAAATGAGATGTACAGCATGTGAATTTTTCATGTTTAAGGGTTATCCTCTATGGTGAAATTCAGACGTTA ATCATGGATGCATTTTAAGGTGACTTGTATGTTCCTGTTGCATTTCAGGTCAATTGTGTTGTAATGCGTGGATTCAATGA TGATGAAATCTGTGACTTTGTTGAGTTGACTCGTGAAAAGCCAATTAATATTCGGTTTATAGAGTTCATGCCTTTTGATG GAAATGTTTGGAACGTCAAGAAGCTTGTACCCTACGCAGAAATGTTGGATACAGTGGTAAGGTAGAATTCACACTTGAAA ACTCACTCATATAGTTATATTCTCTTATAATAGAGACCCTTCATAATCATTGTTACCAAACAGGTGAAACAGTTTCCAAG CTTAAAAAGACTGCAGGATCACCCAACAGAGACTGCAAAGAATTATACAATAGATGGGCATGCCGGTAGAGTTTCATTTA TCACATCAATGACTGAGCATTTTTGTGCTGGTTGCAATAGATTGCGACTACTAGCTGATGGAAACTTTAAAGTCTGTTTA TTTGGTCCTTCAGAGGTAATTTATGTTCTAACCATCAAAGTTCAGTATATTATGCATGTCACCTAAATTTGGTGATACAA ATTCGGCTAGAATCAGTGATGTTTGATATATTTGGAATACTTAATGCTTTGGGTGAATCAGCGAGGTTATAGTTGATGAT GATAATTGCAAGCTTTCTAAATCCAAATAGGTAAATGAATTGAATAATTAGTTCATATGGCTAAAGTAGGATTTAAGGAA ATGGTATTTTAAGGCCTATAAATGTTCTTGATGAGGACAATTCGAACCAATGCAATTACAAACGTACAGTTTACAGAATA AAAGATTCCTTGGAGTTAGCTACTGCTGTTGGGTATGGTTCTGAGAGTTGTTTTCTACTGGTGATCATCACTGGCTTTAC GGATTAAGGGGTTCCAGAATGAGCAGCACCAGATCAGGAATTTGAACCTGAAATTTCTGTTGCCAGGCCTGATTTCTTGA TTTGATATATTCTCAAATTTTGGGAAAAAGGGAAAGTATCTGATAAAGGCTTACTAGGCGAACATAAATTTCAGAAATTA ATATGCACATTAAGAAGTATAAAATAATAGCCTTCAGTAAGTGGATTTATTTAGTCAGTCCCAAAGCTTGTTTGTAAATA ATGCAAAATTAGATATACATGAGGACATGATCTTTAAAATCATCTATGGCATTGCTTTATCAGATGCAGGATTTTGACTT GACAGGTAAAAATTAAACATGCATTTAGTAAAATCATTTTGTCAAAAATGAGAGCTTGTTTGATCCTTTCCTTGTGCTGC ATGAAGATTTTTAAGCCACAAATTGGTTATGTCTTTGCTTTCTCTGTCTCTAGATTACCAATCTGTAAAATAATGTGATG CTTGGTTTTCTTCCAAGTATATTATAATTTGCTATTGGTTTGTGAGTGACTGAACTACAAATTCCGTAGGACTTTAGGTG ACATTGAGTTCAGTGATATGAAAATAATTAGGCAAATAAGTCCACAGCATTGACTTATTAAGCAATTGAATGATCTCTTT CTGTATTGAAGTATTGTGTTCAGATTTTGGGATTGAATAGGCAATTTCTAGCCCCTTCCTCTTTTACATCCTCATTCTAG TGCATATGCTATTTCATTTGGTATATTCCATTTAGTTGATGTCTTATAATTTCTTAGATATATCATCTGGATTCTTAATC TTATACATATCTGCTTGTTAATGTTGTTTGCTTTATCTAGCTAAGACTTGAGAACCAGCTCATTTTTCTATTTTGGAATG GTGTTGAAAGTAAAGTGCATCTTATAAACCTATTCCATTTGTTAACTTGATAAGCATTCTCGTTTTACAAACATACTGGT GGTTACTTTCTTATTGATATTATATGTACCGTTAATATGTTCTGGTTAAATGTGCATTATGTATGGATATTCAGGAATCG AGGAATTTGAAAATGTTATTCACTGAATTGCTCGAGTCAATTGAACCTGGTGTGTAAGGTTTATATATACATTATAATCT ACTATTTACAAGAAGAAGAATACAACAACGACAATAACCAAGCCTTTTCCCACTAGGTAGGGTCGGCTGCATGGATTACA TGACACCACAATGCCTTGTTATGTATTAAATTTTAAAGATAGATCATTAACCTCTAAATCTCTTTTAATGGTTTGGCTTA TGGTTTTCTTTTCTCCCTCTACCTATGGCTTTTTAACCACCCTTCATCTCATCCCTCTCGCCAACCTTCCTTATGGGTGC TTCTGCAAGTCTTCTTCACACATGCCCAAACCACCTAAGATGAGACTACAACCTCTTTTACCTTAAGAACTACAAGAAGA ATAATAAGTAGGCTGAAACATTTCCTAAGAAATGAGGGTTCCAAAGCTGTTTGGAACAGGTTACTCATTGAATAATTAGT TAATTACTATATCTTGTGTTTCCAATGCCACCTGAAGCTAATTTGAACAGTAAATAATACCCTTGGTATGAGAATTCCAT CAGATACTGGCATGGACAGTGAAAACCAGTAATTAAATACATGTAGCATCTTTCACGTGTAACTTCACCTTCTTACCTGG GATCATTGTCTTGCAGGTTAGCTTAAGAGATCCCTTGCGACAAGGTGCAGAGGATCATGAGCTTAGGGAGATAATCGGGG CAGCGGTACGCACTTCTGGTTATTAATGCTAAGACTAAGAATTTCATTGTGATTATTCAGTAACTTTGTTAATATCTCAG GCAGATTTATTATGCTCTTCAATATGATGATAGATAGACTTCGTTTACATGCCATTTTAATGTAGTTTGTTAAATTCTTC CCTAGTAGATAGTTATGTCATCACCTTCTATATGGCTATAGTATGTAGTAAAATAGTCAAGAAGTTCAATTACCACTTGA AACTGTATAGCTATGTTTAAATTAGGCTACTCTATGGGGTGTTGTACTATTACGTTTTTAAGTGTTTCCTTTTCTTTGCT CTAGGTGAAGAGGAAGAAACGTTCACATGCTGGTATGTTTGACATAGCAAAGACAGCAAATAGGCCTATGATACATATTG GTGGATAAGGTCTGGTCATTTTTTCTCTTTTTGCTTTAAAAATTTTGCGCATTTAATCTCTTCAAAGATTGGTTTTACAA TTTACTGAGGCACACAATGATTTGTCTCTTATCTCAGGTATTATGTACTGTTAAAAATTGCTTATACACCAGGAGGCCAG AGCACCCCCAGTCAGAAGCAGTATTGGTTGAGATCTTCATTGATGATCAATCTCACTCCATGTAACTTATAGCTCATGTT TTGCCAAATGTTTGTGTCTACATTTAGTAAATATCAAAGGGTCGAATGACAAAGGTGTTTATTGAGGGCTGTTAGTGAAT AATGCAAATTTTGATTTTGGGATCAGATGTTAATCCTATCCATTGGTTGTCTGTTACATTGTGTACCAGCCAAGTGGGCC AAGCTTAACATTTTACCATGGCTATTGTATTTGTATCTTTGATGGCAAAACCTATCCAAATGGAATTTTGAGAAGGAAGA AAGAATTATATTCTGTTGTGGGTGTTTAGTTTTTTAGCCAGCACCGAGACACATCATTGAACTTGTACTAAATGTATGCT GCTAGGTTGTTAACCAGTCTCACTGGACCGAAATCCTCTATCTCTGTCTCACTAGTTAAAATGAAATTATGTCATGTCAT TTAAAAACCACAAATGGAAG
CDS sequence (LotjaGi3g1v0127600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGTGGCGCTACTTCTCCAAATTCATTCATTCTCCTATTGGATTCAACCCTTCAAACTCCTTACCGGTGAATTGTGA GATGGGGTCTTACTTTGCTGCCAGAAATTGTAATCTTCAAGGTTTATTGAATGGAAGCTTGCATGAGTATTCCACAGGGA CTTTTGCAGCATCTAGTGCTTCATTGTCTGAAGATCAGCCAAAAGATAGTTCTGTTTCTGATATGTTAGTGGATTCATTT GGAAGGCTTCACACTTACTTGAGAATATCTTTAACCGAGAGGTGCAATTTAAGGTGTCAGTATTGTATGCCAGCAGAAGG TGTGGAACTCACTCCTACCCCTCAGATTTTAACAAAGGCCGAGATTCTGCGGTTGGCGGATCTGTTTGTAAGCTCTGGTG TGAATAAAATACGTTTGACGGGTGGCGAGCCGACTGTCAGAAAGGATATTGAGGACATATGTTTGGAATTGTCAAACTTG AAGGGACTTAAGACATTGTCCATGACTACAAATGGTATTGTTCTGGCAAGAAAACTTCCAAAGCTTAAAGAATGTGGTCT TACTTCTTTGAACATTAGTTTGGACACTCTGGTGCCAGCAAAGTTTGAGTTAATGACGAGGCGCAAAGGGCATGAAAAAG TAATGGATTCGATTAATGCTGCGATAGATCTTGGATATAATCCGGTTAAGGTCAATTGTGTTGTAATGCGTGGATTCAAT GATGATGAAATCTGTGACTTTGTTGAGTTGACTCGTGAAAAGCCAATTAATATTCGGTTTATAGAGTTCATGCCTTTTGA TGGAAATGTTTGGAACGTCAAGAAGCTTGTACCCTACGCAGAAATGTTGGATACAGTGGTGAAACAGTTTCCAAGCTTAA AAAGACTGCAGGATCACCCAACAGAGACTGCAAAGAATTATACAATAGATGGGCATGCCGGTAGAGTTTCATTTATCACA TCAATGACTGAGCATTTTTGTGCTGGTTGCAATAGATTGCGACTACTAGCTGATGGAAACTTTAAAGTCTGTTTATTTGG TCCTTCAGAGGTTAGCTTAAGAGATCCCTTGCGACAAGGTGCAGAGGATCATGAGCTTAGGGAGATAATCGGGGCAGCGG TGAAGAGGAAGAAACGTTCACATGCTGGTATGTTTGACATAGCAAAGACAGCAAATAGGCCTATGATACATATTGGTGGA TAA
Protein sequence (LotjaGi3g1v0127600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMWRYFSKFIHSPIGFNPSNSLPVNCEMGSYFAARNCNLQGLLNGSLHEYSTGTFAASSASLSEDQPKDSSVSDMLVDSF GRLHTYLRISLTERCNLRCQYCMPAEGVELTPTPQILTKAEILRLADLFVSSGVNKIRLTGGEPTVRKDIEDICLELSNL KGLKTLSMTTNGIVLARKLPKLKECGLTSLNISLDTLVPAKFELMTRRKGHEKVMDSINAAIDLGYNPVKVNCVVMRGFN DDEICDFVELTREKPINIRFIEFMPFDGNVWNVKKLVPYAEMLDTVVKQFPSLKRLQDHPTETAKNYTIDGHAGRVSFIT SMTEHFCAGCNRLRLLADGNFKVCLFGPSEVSLRDPLRQGAEDHELREIIGAAVKRKKRSHAGMFDIAKTANRPMIHIGG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 71 | 399 | 329 | 3.8E-156 | – | |
| PANTHER | 71 | 399 | 329 | 3.8E-156 | – | |
| Gene3D | 72 | 400 | 329 | 1.4E-108 | ||
| SFLD | 73 | 400 | 328 | 0.0 | – | |
| SFLD | 73 | 400 | 328 | 0.0 | – | |
| SUPERFAMILY | 76 | 364 | 289 | 7.19E-74 | – | |
| Hamap | 76 | 400 | 325 | 36.537 | ||
| TIGRFAM | 76 | 400 | 325 | 1.7E-110 | ||
| SMART | 85 | 288 | 204 | 4.3E-11 | ||
| CDD | 89 | 287 | 199 | 2.90969E-19 | – | |
| Pfam | 89 | 250 | 162 | 7.8E-33 | ||
| ProSitePatterns | 91 | 102 | 12 | - | ||
| Pfam | 92 | 204 | 113 | 1.2E-6 | – | |
| Pfam | 256 | 382 | 127 | 5.7E-38 | ||
| CDD | 276 | 343 | 68 | 0.00769013 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Mo-molybdopterin cofactor biosynthetic process | The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands. | ||
| Cellular component | Molybdopterin synthase complex | A protein complex that possesses molybdopterin synthase activity. In E. coli, the complex is a heterotetramer consisting of two MoaD and two MoaE subunits. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. | ||
| Molecular function | Iron-sulfur cluster binding | Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms. | ||
| Molecular function | 4 iron, 4 sulfur cluster binding | Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. |
Expression pattern of LotjaGi3g1v0127600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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