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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0167400 |
| Transcript ID | LotjaGi3g1v0167400.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter ATP-binding protein ARB1; TAIR: AT5G60790.1 ABC transporter family protein; Swiss-Prot: sp|Q9FJH6|AB1F_ARATH ABC transporter F family member 1; TrEMBL-Plants: tr|I3SWL1|I3SWL1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0167400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:22886713..22890330) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTGTCTGACGCGAGCAAGAAGAAGGCGGCACAGAAGAAAGCGGCCGCGGCGGCTAAGAGAGGAGGCAAGGCGGCTAC CGCTGCGGCTTCGTCGAAAGCGGCGGCGTCTGACAAGGCTGCCGACAAGCTCGCTAATGGAATTGCGGATATGCAGATTT CCGATAGGACCTGTACCGGCGTCCTCTGTTCGCATCCTCTCTCGAGGGATATTCGGGTGAGTTAACCTATTACTCTTTCA TCATCATCATCAACGTGCCTATGCCTGTATTACAAATCATGAAATGGAAAATTCAATTTTAGTTGATTTTTATGTATAAA AGTTGATGTAGAGTGTTTGATTTGATTTTGTGTATTTGGTGTTATGTTTCTTCTGGTGATTTGCTCATATTGTTGCCTCT GTTAGATTTAAACTGAAGCAATTATTCAATTCATGTATGTAACTCTGATGGTAAAGTAAAATTTTGAACTTGTTTGGGGT GGTTGAAAGAAACTGGTTTCTGAAGGTTTGAATCTGGTGTTTTGCTGCAATTGTTATTAAAGGATGCAAATACATATTTA CCTGTGCCTAAAGCGCTTAGCTAGTTTGGCAAACATGCATTTGTTTCTGTGTGTAGCTTTATTGTAGAACATACTGATAG TGGCATGTTATTATGAAAGGTCTGAGTTCATGTTGAAAAGCTTTTTATTGTGGTCTAATGGTTTATTTGGATTTTTCCTT TTGGCATCTTATAAGAGTTCTGCCTTGATTCTTCAATTTAACATGTTCTGGTGTACTTTTGTGATGCTATACTTTCATTG TCCCTCTGGTAAAAGGAAAGCAATGAATAATCTTTCCCAGAAGTTCTGGGCCAGAACCTTCATTAGTCATTAATCAAATT TCCTGAAGCTGGAGTGTATAAGTTTTCTAAAACGTGATAGCATTCTTAGTTGAGTGTAGTCTTACTTCTAGCTTATTATT GTTGGTGTGTGTATATGTATTTGAGTGCCTAGCCAGACAGTTGGGTATGAATCATTGACGTTCTACCATGTAGCCAAGGT AAAAAAAACTTGGTTCTCCTTTGTGAATGTAAATTAGAGGTAGGGAATTGTAATATTTTGCCATAAAAGAGGATAGCCTG AAATATGATTTGTAGCTAATTGAATTGTCGATGCATTTCGAGTTAACTGTGTTGTATTGACGTATGTGCATTGCTGATAT TACAGATAGAATCTCTATCAGTTACTTTTCATGGACATGATCTGATAGTCGATTCTGAGTTGGAGCTGAATTATGGAAGG TTTGTCTATCCATTTGTTCAGACTGCAGACTTTTATATAGGGTGCTAACATTTGTAACTGCAATATTTATTTATTAGTGA TTGTGTTTTCTTTGAATTATTTTCAGACGTTATGGGTTGCTTGGGTTAAATGGTTGTGGAAAATCTACCCTGCTTACAGC AATAGGTCACCGAGAACTTCCTATACCAGAGCACATGGATATTTATCACCTTACCAGGGAGATTGAAGCCTCTGACATGT CTGCATTGGAAGCTGTCGTGAGCTGTGATGAGGAAAGGTTGAGATTGGAGAAAGAAGCTGAAACTTTGGCAGCACAGGTA TGTTTAATTATTGTGACAACTGAACTTTTACACCACTGTTTTGTTGTTGAATGGCTTCATACTTGATTTATTTTTTTCAC AGGATGATGGGGGTGGTGAAACTCTCGAACGTATTTATGAACGATTAGAAGCCTTGGATGCATCAACTGCAGAAAAGCGT GCTGCTGAAATTTTACACGGTCTTGGGTTCGACAAAAAGATGCAGGCAAAGAAGACTCGTGATTTTTCTGGTGGCTGGAG AATGAGGATTGCTTTAGCACGAGCTCTATTTATCAACCCGACCATTCTTCTACTTGATGAACCAACCAATCACCTTGGTA TTCCTCCTTCCATATAAGAATTTATACTGTCTTTAAGTCTTAATAGTTATTATTACCTTGTCATGCTTTATGCATTGATT TTTTCGTATAATGATTTTTTCTGCTTGGCTTACTTGTGATTTTGAATTGAAGGGCTGGTGGATTCCTTATCTGTTGTTTA AATTATGTCTACCAAATAAATTAGGCCTTGTGAAGTTTTTGCTGCAACATTTTCTTCGTTTCTCCTGTGATGAAGGAATG CCATGGTGGTTATACTTAAAGATAGTATAATATATTTATATTATGGTTGGTCTGTGAATGCAGTATCCAATAATATGATT CTAACAACTCTTGATTATTTTGCACTTATCTTGTTCAATTCTCCTTCTCTGTCCACCTTTGGCTGCATTCTATCTCTGCA TTATCATATCATTATGTGGTGGTCGCATTTATCCTAATGCAAGTGATGCAATCTTAACTTGGAATTATGGGTGTCACCTG GGTTATTCTTTCAAATTAAATTCTAGCTATTGGTTTTTTCCTGTATTTTATTTTAATTGCGTGATGTTCTTACATTTTTT TGAAACATCTGTATTTATGTTCGATCTTTATGTGGAGAGTATTGGTGGGTTCCTAATTATCTTACAAAATGTGTTTTCAG ATTTGGAAGCTTGTGTGTGGCTGGAGGAGAGTTTGAAGAATTTTGACCGTATTATGGTTGTGATTTCACATTCCCAGGAT TTTCTTAATGGTGTCTGCACGAATATCATTCACATGCAAAGCAAACAATTGAAGATGTATACTGGTAATTATGATCAATA TGTTCAGACACGATCTGAACTGGAAGAGAACCAGATGAAGCAGTACAAGTGGGAGCAGGAACAGATTTCCAACATGAAAG AATACATTGCCCGATTTGGGCATGGATCAGCAAAATTAGCTCGCCAAGCTCAGAGTAAGGAGAAAACTCTTGCAAAAATG GAGCGGGGTGGACTTACAGAGAAGGTAGCAAGAGACTCAGTTTTGGTATTCCGCTTTGTTGACGTGGGAAAACTTCCACC ACCTGTGCTCCAGTTTGTTGAAGTGTCATTTGGTTACACTCCTGATAATCTCATCTACAAGAACATTGACTTTGGAGTTG ATTTAGACTCCAGGATTGCTCTTGTTGGACCCAATGGAGCTGGGAAGAGTACATTACTGAAACTAATGACAGGTGAATTG GGTCCTACAGATGGCATGGTTCGACGCCACAATCACCTTCGCATTGCACAATATCACCAGCACTTGGCTGAAAAGCTGGA CATGGAAATGTCTGCTCTTCTGTATATGATGAGAGAGTACCCTGGAGTTGAGGAAGAGAAGATGAGAGCAGCTATTGGGA AGTTTGGACTGTCGGGCAAAGCGCAGATCATGCCTATGAAGAACTTATCTGATGGGCAGAGGAGCCGTGTGATATTTGCA TGGTTAGCTTATAGACAGCCTCAGATGCTACTTTTGGATGAACCAACTAATCATTTGGATATTGAAACAATTGACTCACT GGCTGAAGCATTGAATGAATGGGATGGTGGTCTGGTGCTTGTTAGCCATGATTTTAGGCTCATAAACCAGGTAGCCCATG AGATATGGGTGTGTGAAAATCAAGCTGTGAAAAAATGGGAGGGTGGTATTATGGACTTCAAGCGACATCTCAAGGCAAAG GCTGGTTTATCTGACTAA
CDS sequence (LotjaGi3g1v0167400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGTCTGACGCGAGCAAGAAGAAGGCGGCACAGAAGAAAGCGGCCGCGGCGGCTAAGAGAGGAGGCAAGGCGGCTAC CGCTGCGGCTTCGTCGAAAGCGGCGGCGTCTGACAAGGCTGCCGACAAGCTCGCTAATGGAATTGCGGATATGCAGATTT CCGATAGGACCTGTACCGGCGTCCTCTGTTCGCATCCTCTCTCGAGGGATATTCGGATAGAATCTCTATCAGTTACTTTT CATGGACATGATCTGATAGTCGATTCTGAGTTGGAGCTGAATTATGGAAGACGTTATGGGTTGCTTGGGTTAAATGGTTG TGGAAAATCTACCCTGCTTACAGCAATAGGTCACCGAGAACTTCCTATACCAGAGCACATGGATATTTATCACCTTACCA GGGAGATTGAAGCCTCTGACATGTCTGCATTGGAAGCTGTCGTGAGCTGTGATGAGGAAAGGTTGAGATTGGAGAAAGAA GCTGAAACTTTGGCAGCACAGGATGATGGGGGTGGTGAAACTCTCGAACGTATTTATGAACGATTAGAAGCCTTGGATGC ATCAACTGCAGAAAAGCGTGCTGCTGAAATTTTACACGGTCTTGGGTTCGACAAAAAGATGCAGGCAAAGAAGACTCGTG ATTTTTCTGGTGGCTGGAGAATGAGGATTGCTTTAGCACGAGCTCTATTTATCAACCCGACCATTCTTCTACTTGATGAA CCAACCAATCACCTTGATTTGGAAGCTTGTGTGTGGCTGGAGGAGAGTTTGAAGAATTTTGACCGTATTATGGTTGTGAT TTCACATTCCCAGGATTTTCTTAATGGTGTCTGCACGAATATCATTCACATGCAAAGCAAACAATTGAAGATGTATACTG GTAATTATGATCAATATGTTCAGACACGATCTGAACTGGAAGAGAACCAGATGAAGCAGTACAAGTGGGAGCAGGAACAG ATTTCCAACATGAAAGAATACATTGCCCGATTTGGGCATGGATCAGCAAAATTAGCTCGCCAAGCTCAGAGTAAGGAGAA AACTCTTGCAAAAATGGAGCGGGGTGGACTTACAGAGAAGGTAGCAAGAGACTCAGTTTTGGTATTCCGCTTTGTTGACG TGGGAAAACTTCCACCACCTGTGCTCCAGTTTGTTGAAGTGTCATTTGGTTACACTCCTGATAATCTCATCTACAAGAAC ATTGACTTTGGAGTTGATTTAGACTCCAGGATTGCTCTTGTTGGACCCAATGGAGCTGGGAAGAGTACATTACTGAAACT AATGACAGGTGAATTGGGTCCTACAGATGGCATGGTTCGACGCCACAATCACCTTCGCATTGCACAATATCACCAGCACT TGGCTGAAAAGCTGGACATGGAAATGTCTGCTCTTCTGTATATGATGAGAGAGTACCCTGGAGTTGAGGAAGAGAAGATG AGAGCAGCTATTGGGAAGTTTGGACTGTCGGGCAAAGCGCAGATCATGCCTATGAAGAACTTATCTGATGGGCAGAGGAG CCGTGTGATATTTGCATGGTTAGCTTATAGACAGCCTCAGATGCTACTTTTGGATGAACCAACTAATCATTTGGATATTG AAACAATTGACTCACTGGCTGAAGCATTGAATGAATGGGATGGTGGTCTGGTGCTTGTTAGCCATGATTTTAGGCTCATA AACCAGGTAGCCCATGAGATATGGGTGTGTGAAAATCAAGCTGTGAAAAAATGGGAGGGTGGTATTATGGACTTCAAGCG ACATCTCAAGGCAAAGGCTGGTTTATCTGACTAA
Protein sequence (LotjaGi3g1v0167400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSDASKKKAAQKKAAAAAKRGGKAATAAASSKAAASDKAADKLANGIADMQISDRTCTGVLCSHPLSRDIRIESLSVTF HGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGHRELPIPEHMDIYHLTREIEASDMSALEAVVSCDEERLRLEKE AETLAAQDDGGGETLERIYERLEALDASTAEKRAAEILHGLGFDKKMQAKKTRDFSGGWRMRIALARALFINPTILLLDE PTNHLDLEACVWLEESLKNFDRIMVVISHSQDFLNGVCTNIIHMQSKQLKMYTGNYDQYVQTRSELEENQMKQYKWEQEQ ISNMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVARDSVLVFRFVDVGKLPPPVLQFVEVSFGYTPDNLIYKN IDFGVDLDSRIALVGPNGAGKSTLLKLMTGELGPTDGMVRRHNHLRIAQYHQHLAEKLDMEMSALLYMMREYPGVEEEKM RAAIGKFGLSGKAQIMPMKNLSDGQRSRVIFAWLAYRQPQMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLI NQVAHEIWVCENQAVKKWEGGIMDFKRHLKAKAGLSD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 23 | 23 | - | – | |
| PANTHER | 2 | 597 | 596 | 0.0 | – | |
| PANTHER | 2 | 597 | 596 | 0.0 | – | |
| Gene3D | 61 | 324 | 264 | 5.2E-52 | – | |
| SUPERFAMILY | 64 | 320 | 257 | 1.42E-40 | ||
| CDD | 71 | 288 | 218 | 3.44109E-45 | – | |
| ProSiteProfiles | 71 | 311 | 241 | 15.28 | ||
| Pfam | 89 | 243 | 155 | 1.5E-22 | ||
| SMART | 95 | 297 | 203 | 1.0E-7 | ||
| ProSitePatterns | 215 | 229 | 15 | - | ||
| Pfam | 282 | 354 | 73 | 2.8E-22 | ||
| Coils | 289 | 309 | 21 | - | – | |
| Gene3D | 352 | 595 | 244 | 1.4E-50 | – | |
| SUPERFAMILY | 367 | 575 | 209 | 4.07E-42 | ||
| ProSiteProfiles | 382 | 597 | 216 | 15.773 | ||
| CDD | 382 | 573 | 192 | 3.65145E-52 | – | |
| Pfam | 398 | 529 | 132 | 1.2E-22 | ||
| SMART | 407 | 574 | 168 | 1.7E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi3g1v0167400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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