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IPR032781 is a ABC-transporter extension domain.
<p>In E.coli four ABC-F proteins have been characterised: EttA, YbiT, YheS, and Uup. EttA was shown to interact with the ribosome ([interpro:IPR022374]). YbiT, YheS, and Uup have also been shown to bind to the ribosome [[cite:PUB00093675]].</p> <p>This domain is an extension of some members of [interpro:IPR003439] and other ABC-transporter families. It is not responsible for ribosome binding, but it is used by proteins which bind to the ribosome to stabilise the interaction.</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: ABC transporter F family member 3-like [Glycine max] gi|356575104|ref|XP_003555682.1| | 11 | ||
| – | PREDICTED: ABC transporter F family member 3-like [Glycine max] gi|356575104|ref|XP_003555682.1| | 16 | ||
| – | PREDICTED: ABC transporter F family member 5-like [Glycine max] gi|356509032|ref|XP_003523256.1| | 15 | ||
| – | PREDICTED: ABC transporter F family member 1-like [Glycine max] gi|356539344|ref|XP_003538158.1| | 17 | ||
| – | PREDICTED: ABC transporter F family member 1-like isoform 1 [Glycine max] gi|356543500|ref|XP_003540198.1| | 15 | ||
| – | PREDICTED: ABC transporter F family member 1-like isoform 1 [Glycine max] gi|356543500|ref|XP_003540198.1| | 15 | ||
| – | ABC transporter family protein [Populus trichocarpa] gi|224093878|ref|XP_002310031.1| | 17 | ||
| – | ABC transporter ATP-binding protein; TAIR: AT5G64840.1 general control non-repressible 5; Swiss-Prot: sp|Q9LV93|AB5F_ARATH ABC transporter F family member 5; TrEMBL-Plants: tr|I1JY78|I1JY78_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0312300 | 17 | ||
| – | ABC transporter ATP-binding protein ARB1; TAIR: AT5G60790.1 ABC transporter family protein; Swiss-Prot: sp|Q9FJH6|AB1F_ARATH ABC transporter F family member 1; TrEMBL-Plants: tr|I3SWL1|I3SWL1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0167400 | 17 | ||
| – | ABC transporter ATP-binding protein ARB1; TAIR: AT5G60790.1 ABC transporter family protein; Swiss-Prot: sp|Q9FJH6|AB1F_ARATH ABC transporter F family member 1; TrEMBL-Plants: tr|I3SWL1|I3SWL1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0167400 | 16 | ||
| – | ABC transporter ATP-binding protein ARB1; TAIR: AT5G60790.1 ABC transporter family protein; Swiss-Prot: sp|Q9FJH6|AB1F_ARATH ABC transporter F family member 1; TrEMBL-Plants: tr|I3SWL1|I3SWL1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0167400 | 17 | ||
| – | ABC transporter ATP-binding protein ARB1; TAIR: AT5G60790.1 ABC transporter family protein; Swiss-Prot: sp|Q9FJH6|AB1F_ARATH ABC transporter F family member 1; TrEMBL-Plants: tr|A0A0L9UN24|A0A0L9UN24_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0487200 | 15 | ||
| – | ABC transporter ATP-binding protein ARB1; TAIR: AT5G60790.1 ABC transporter family protein; Swiss-Prot: sp|Q9FJH6|AB1F_ARATH ABC transporter F family member 1; TrEMBL-Plants: tr|A0A072VMQ2|A0A072VMQ2_MEDTR ABC transporter family protein; Found in the gene: LotjaGi3g1v0487200 | 16 | ||
| – | ABC transporter ATP-binding protein ARB1; TAIR: AT5G60790.1 ABC transporter family protein; Swiss-Prot: sp|Q9FJH6|AB1F_ARATH ABC transporter F family member 1; TrEMBL-Plants: tr|A0A0L9UN24|A0A0L9UN24_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0487200 | 15 | ||
| – | ABC transporter ATP-binding protein; TAIR: AT5G64840.1 general control non-repressible 5; Swiss-Prot: sp|Q9LV93|AB5F_ARATH ABC transporter F family member 5; TrEMBL-Plants: tr|A0A0D2QNC2|A0A0D2QNC2_GOSRA Uncharacterized protein; Found in the gene: LotjaGi4g1v0403500 | 17 | ||
| – | ABC transporter ATP-binding protein; TAIR: AT5G64840.1 general control non-repressible 5; Swiss-Prot: sp|Q9LV93|AB5F_ARATH ABC transporter F family member 5; TrEMBL-Plants: tr|I1JY78|I1JY78_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0403500 | 16 | ||
| – | ABC transporter ATP-binding protein ARB1; TAIR: AT1G64550.1 general control non-repressible 3; Swiss-Prot: sp|Q8H0V6|AB3F_ARATH ABC transporter F family member 3; TrEMBL-Plants: tr|G7J816|G7J816_MEDTR ABC transporter F family-like protein; Found in the gene: LotjaGi6g1v0034300 | 16 | ||
| – | ABC transporter ATP-binding protein ARB1; TAIR: AT1G64550.1 general control non-repressible 3; Swiss-Prot: sp|Q8H0V6|AB3F_ARATH ABC transporter F family member 3; TrEMBL-Plants: tr|I1LXJ6|I1LXJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0034300 | 16 | ||
| – | ABC transporter ATP-binding protein ARB1; TAIR: AT1G64550.1 general control non-repressible 3; Swiss-Prot: sp|Q8H0V6|AB3F_ARATH ABC transporter F family member 3; TrEMBL-Plants: tr|I1LXJ6|I1LXJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0034300 | 16 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 5.26 |