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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0175400 |
| Transcript ID | LotjaGi3g1v0175400.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WD-repeat protein, putative; TAIR: AT3G44530.2 histone chaperone HIRA-like protein; Swiss-Prot: sp|Q9LXN4|HIRA_ARATH Protein HIRA; TrEMBL-Plants: tr|K7LVP9|K7LVP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0175400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:24395516..24403502) extracted from Lotus japonicus Gifu genome v1.2.
ACAGAAATTTATTTGTTTTGACACAAAACACTCTATTCTCTGTTTCTCTAACAAGATTCTCGTGCTCTCTCTCCTAGATA CTCACTGTCTGTCAGCAATTGCACATTACATGGAGGCCATGATTTACCAAACTATTTAGAGTAAGTGACCATTCACATCC ATCTCTTTCATCTTCTCTTCAATTCTCAATTTTGACATAAAAAGAGTAACAAATATTGTCCTTATTTTTTTTTGCCTTTT TATAAATTCTTAAAAATCACCATTTTTCAAGTCATTGGCATCTTGGCTAAGATTTGACTGTTAACAACAGAGAAGTAAAG TTAACCCTTCTCGATCTTCTCTCTGACCCATCATTACATTTTAGGGTTTTTGCTCATTTGTCCCCCAAAGCTAGGGTCTT TGTCCTTTTACCTTATTTTCCCCCAATTCAAAATTAACAAAAATCATGTTTTCTTTTTCTTTCTCAGGTTTGTAAATTCT CAACAATTTAGGGTTTTCCCCCTTTCATGAAATTTGCAAAACCCTTGAGTTGTTCAGTTCACATGTCAATTTTCTGTGTA TTTAATTTTTACTATTTGTGGTTTTTAGGGTTTTTCTGCGTGAATCAGAACCTGCAATTTGCGTTGGAATCTTAGGGTTT GAGCAAATTCGGTGGTGTTTTCAGCTTCTTCCACTTCCCCTCAAGGAAAGAAAAAGGAATTGAAGTTGCAGAGAGTAGAG TGGAAGAAAGACTGTTTTTTTACCGTTGAAAAGGCGATTTTTTGATTTTTTTGATTTTGGGAAGATGATTGCTGAGAAAC CAAGCTGGGTTAGCCATGAGGGCATGCAGATTTTCTCCATTGATGTTCAACCCGGTGGACTGAGGTTTGCCACTGGTGGT GGTGACCATAAGGTATGGAAATTCTCCCTACAATTCTTGAACATGTGATGATGATTGCTTTCGGAGCACCGAAGATGTTA TTTCGTGCATGCTTACTTGTTAGACATTGATTTGCAGGGCTTAGAGTATCTTTGTGTTGCATGTTCAATAAAATTGCCTC CTGATGGACTTGTCAGTTATTTTCTAGATATGGTTTAGCTCTGGAAGCTAAATTTCCTTTGGTGCATTTTGGTTAACTGT TTTTCGTATTGTGATTTGCATATAAAAAAGGAAATGTACTAAACATCCAATGTTAAAACTGCCTGCTTAGTGTCAGCTAA GAACTATAACTATTGCCGAAGTTTATTGATTCTGTTTTGTTTGTTTTCATAATTAGTTAATTATGCTGTGGACCTTTGTA ATACTTTCTGACGGTGCATGAGCAAACTTGCTGTATACTACTTCAGGTCTTCAGGGTCGGATTAGTTTCGACTCGATCAT TCACAGTGTTACCAAATAGCGGCTATGCCGCTATAGCGTAGCGCATTTTTGGTTAATCGCGACGCCACTATTGCCCACTA TAGCGCGCTATTCCTGCTATTCGCCGCTAAATAGCGGCCGAAATAGCGGATTTTTGGCTCACCGTGATGGTCCGCGATTT GATCATGATGTTCATATTTAATTTCTTGATTTGTCTTAAGTACTTGAAATTAATTTCCATAAAATCACATTCTCAAGTAT GTTTCATGCAGGTTCGCATATGGAATATGAAGTCTGTTAGTACGAACATGGAAAATGATGACGCTTCACAAAGGCTTCTT GCCACCCTGCGGGATCACTTTGGCTCTGTCAACTGCGTTAGGTGGGCTAAGCATGGAAGGTATGTTGCATCAGGATCTGA TGATCAGGTGATATTAATTCATGAGAGAAAGCCTGGTTCAGGAACCACAGAATTTGGCAGTGGAGAGCCCCCGGATATTG AAAACTGGAAAGTAGTAATGACTTTGAGAGGGCACACTGCAGATGTGGTAATGCAATTGCTTCTACTTTTTCAACTTCAT TTTTTTAAATTTCATACTGGCATTTGCTCTTTGGAATTCGATGCACCAAATTTGTCATTTAAACTGGCCTCTAGCTGCTT ATCCAAATGCTTTTACATTTTCAAGTTATCATGTATTGGAGCTAAATATTTTATCATCATTAATTTGGGATCCTTTTTGT CCATGCTTAAAGTAGGTGGATCTTAATTGGTCTCCTGATGATTCTGCATTGGCTAGTGGGAGTTTGGACAATACTATCCA TGTTTGGAATATGAGCAATGGGATTTGCACTGCTGTTCTTAGGGGTCACTCGAGCCTAGTCAAGGGGGTTGCCTGGGATC CTATTGGCTCTTTTATAGCTAGTCAATCTGATGACAAAACTGTCATTATATGGAGAACTAGTGATTGGAGTCTTGCTCAT AAGACAGATGGTCACTGGGCAAAATCAGTAAGTTTCTTATTTTGAAATCCTTTCTGATCCGATTAAACCTTTTCTTTTCT TAATTAGTGCATCTTCCTTTCAGCTTGGGTCAACTTTTTTTAGGCGTCTTGGATGGTCTCCTTGTGGTCATTTTATCACC ACCACGCATGGCTTCCAGAAACCAAGGCATTCTGCCCCTGTGCTAGAGAGAGGTGAATGGTCTGCAACATTTGATTTCCT AGGACACAATGCTCCAATCATTGTGGTGAAGTTCAACCATTCTATGTTCAGAAGGAATATCTCTAATGCTCAGGAAGTGA AGTCTGTGCCTGTTGGGTGGACCAATGGTGCCTCCAAGACTGGAAGCAAAGAGCCACAGCCTTACAATATTATTGCCATT GGTAGTCAGGATCGAACTATAACAGTGTGGACTACTGCAAGTGCCCGCCCTCTATTTGTGGCTAAGCATTTTTTTACTCA AAGTGTTGTGGATTTGTCCTGGTATTTCTCTTCGTCTCTAGTTGCATTTGATATGTTATGTATGTGCTATTTTTTTAATT AATATTTTGGGTTTATCATATCTCGTTTTCTGTGAGTAACTCTTTATTATTCTTTTCCCATTTGAAACAGGAGCCCTGAT GGATATTCACTTTTTGCATGTTCCTTGGATGGATCAGTGGCCACATTTCATTTTGAGCCAAAGGAACTTGGTGAGAGATT AGGTGATGCTGAGCTAGATGAGTTGAAGAGAAGTCGTTATGGTGATGTGAGAGGGCGCAAAGCAAACTTAGCTGAAAGTC CGGCACAGTTACTGCTAGAAGCAGCTGCTGCCAAGCAGACATCTAGCAAAAAGGTGGTTTCTGATGCCCAGCTACACCTG ACAATGACAAAGGCTTTTGTTCACGCTGGGGTTACTACAAAGAATGTCGAGCCTCAAGTTGATGATGGTATTAAGAGTGG AGGTCCAGCAGGGGATGGATCAGACAAAGTTACGACATCTGGTCGGATTTCTAGTCCTGTTAAACAAAGAGAGTATAGAC GACCTGATGGCCGGAAAAGAATTATTCCTGAAGCAGTCGGAGTGCAGCAGGAAAACATTTCTGGTCAGCAGGCACTTGAT TTTCCTTTTGTGTCTTCTGATCACAGAAAGGCTCCTGACAGAGCTGTTTCTAATAATGATGACATAAGAGCAAGTACATT GGGAGGTGCAAATTTCAGAAGTTCAGACTTAAAAGAGCGTTCTGGGGTTACTGCTAGGGCCACAATTTCTGAGAGCCTAG TGATTCAGAAAGTTCCAGCTTCTGCTGGTGATGGGAGCATCAATGTTGAACAGTTGGGCAACATGATGACTTCTAGTTCT TCAGCTTCTTCTGGTGCTACACTTACCATTAGGGTATTTGACAAGAAAGGCGATGACGGTACTTCACCTATTCTTTTGGA AGCACGCCCAAGAGAACATGTTGTAACTGACATTGCAGGGGTGGGAAATACATCCATGACGAAAGAAACAGAAATTTTGT GCACGAGGGGGCCTCATACACTTTGGTCTGATAGGATATCAGGAAAAGTCACTGTTTTAGCTGGTAACGTAAATTTCTGG GCCGTTGGGTGTGAAGATGGATCTCTGCAGGTAAATTTACTTTTTGCATGTATAATTTTATATACATGAGTTTTTTTACT CATTTTTTGTTAGTATTTCTTATATATTGCAGATTATGATTGTATAATTAGCTTTTGTAGTTACACAGAAAATTCTTTGT TGCTCGTTTCCCTATGTCTTTTATCAGCATATTTTACTATTATCTGATATATCTTTTTTTTATGTATATCCGATGTTATC TCTTCTATGCCTTTCATCACACATATTTTATGCTTTTAAATATCTTGGTAGCATCTCTTTTGCATTGGTTAAGTTAATAC AAGTTGTTAGTGTATGCAGGGTGTATGCCCTGCATACACGCTACAGGAAGAAACTCAAACATTGTGTCACTAATGCTTGA TCAAAGAAATTTCTTGCACACTTCAGATATCCCATAAATGAGACACAATTTTTGTTGGGGGGTGGGGTGAAACTGCAAAT TTTGCATGAAGATGGTTATCCGTTGTAATCTTCTACTGCTCTACCTTAGTGGATTATGTTCTGTGGCTTTTCTCTCATTA TCTTTTGGTATTCAGATTTTTGGAAGAAAAAATATTTTTAAATTTCAATTCCATTTTTTACTTGTGTTCCAATTGAAAAA TGACTAATCTGTATATACGGTGGGGTACATGGGCATAACATATTGTTCAATGTATCAGCAAAATGGTAGATCTTATGCTA TCTCTGTTTTTTTGTATTTTGCTTTCTCTGAGAAGATTTACTCCAAGTGTGGGAGACGAGCAATGCCTACCATGATGATG GGATCTGCTGCGACATTTGTAGACTGTGATGAATGCTGGAAGTTGTTGCTGGTGACAAGAAAGGGATCCCTTTACTTATG GGATTTATTTAACCGAACCTGTCTCCTTCAAGATTCATTGGCTTCTTTAGTCACTTCAAGTCCTAACTCATCTGCTAAAG ATGCAGGTACCATATATTACCTACACTTGTTTGATGATGGAGAATTGGAGACACTTGGTTTTTATGTCCTCACTGTTTTC TTTTTTACCCTACTCGTGGGGAACTTCCCTTGGTATTTCCATCAGTTTTCTTCTTTGGTGGCTTTAAACATTTTATTGCT TTTTTTAGGAACTATTAAAGTTATATCTGCAAAGCTATCAAAATCGGGTTCTCCTCTTGTTGTGTTGGCCACTCGCCATG CTTTCCTATTTGACATGAGTTTCAAGTGTTGGCTGAGGGTTGCAGATGATTGCTTCCCTGCATCAAATTTTGCCAGCTCT TGGAGTTTGGGTTCAATTCATGGTGGTGAGCTGGCAGATTTACAGGTTGATCTTAGAAAATATATGGCCCGGAAGCCAGG TTGGACAAGGTGTGTATTGATTGGGATCTATTCTTTTTATCTAGCCAGGTTCGATTTATATATGCTGTTGGATACTTTAT GAATATGGAATTAAGGGTATATAGAATGTGGGATAGATGTGACTCATTACTACATCTGAACAAACATTTGCATATCTAAA ATTCTAAATATATTCAGCAAAAACAACCAAGTTTTATCTCACTCATTGGGATCAATTAGTGTCATTAGGGTGCCTAAATT TTTTTCAATAAAACAGTGAAACTATTTAGAACTAGGCCTTCTTTTAAATAGTTTCTCCTAATGTGTAATTAGGTTTTCTT TTATTCTTTAATCAGACAATTTTTAGTTTGATAAACATTTTTCTTATTTGATCCTCCCATTTGTTCTTACTTTGCTTCTC ATTTTACCTAACCACCTTATATGAGTTTTCATCATATTCTCGCTACTCCTACTGTTATCTTGGATACATTTGTTCCTATT CTCATATTGTATAGGCATTATCTTAAAAGTTGATATGAAAAATTATAAGTTAGTTTGAATGTATCTACAATTATTCCATT ATACTTAATTTTCCTGTTTAGCAGGACAAATGGATTTTGCTTGTTATCTAGATCTGATGTCTTGTTTCCCAATTTTCCCA CCCCCTTTTAATTAGAGTTCTGATGTTTCAAAAGAACATATACTTAACTCGACTATCTTGATGCAGAGTGACTGATGATG GAGTGCAGACGCGTGCTCATTTGGAATCTCAATTGGCTTCTTCCTTGGCTTTGGGATCCCCCAATGACTATCGCCAGTGC CTGTTGTCTTATGTACGATTTCTTGCAAGGTGTTATTCTTTTCCCTTTTTCTTTTAGATATTCTATAATTACAATTTTCG CACCTTGTTGATCTTGCATGAAACATGCATGCTCCATGTTGCAACCGAGGTACACTTGCTTCTGTACTTTTTTACTTTTA CTATAAAATGTGCATGTAATATATTATTTCTTACTCCCCTCCTGCCGCTAACCCCCTTGCCGTCTGTCTCCTAGCTATTC TACTGCTTAAACTTCACATATTTTTTTCTAAACATCTTGTGATTGTCCTAAATTATACGGTTTACATGATGATAACTATT CTGGAGATGGATGGAACTCAACTTGTGAATAGTCTTCCGGGATTTTTCTTGTGAAGATGCCATATATACTTTAGAAAATG TAGTCATAAATCTTAGTTTTAAATGCTTTGTAATTATGTATATGCACATTCTGTGGTCTTTGTTGATTTGGACTTTCTTA GACTAACTAAAGATGACAAAATGATTGCAGGGAAGCAGATGAGTCTCGTTTAAGAGAAGTCTGCGAGAGTTTCCTTGGAC CTCCAACAGGAATGGCTGAGGAAGCATCTCCGGATTCAAATAAATTAGCATGGGATCCTTTTGTTCTTGTAAGTTTTTTT CCTACCTGCGTATGTGTGCTTGAACCCAAATATTATTACTATATGTTAAAAATCAGTCAAAGCTATGAATAGAAACAGAT AATTACTGAAATTTATTATCAGTCAAGAGGTAAACAGAGGATAAGTGCTAGAGGAAAGATTTATTGGCTGATTATTTAGG TCCAGTGATACCTATGTTCATTTCTATTGAGAATTGTTAAACACTGAAAGATCACTTATCATCTCAAATTTTCTGGCTGG ATCTTTGCAGGGAATGAGAAAACACCAACTCCTTAGGGAAGATATTCTTCCATCCATGGCATCGAACAGAAAAGTCCAGA GATTGCTCAACGAATTCACGGATCTGTTATCTGAGTATGACATTGTTGATGATAATCAAGACCAAAGAAATCCCATGTTA CCAAAGTCATCTTCACTAGGAACCAAACCAATCGAGAACGGTTCACTAGCAAAAGATCACGAGGAGAACTCTGATCATGC AGCCATGGATTGCCAGGACAATACTCTAGATCAAACTCGAGTTCTCCCAAATGAAGCAAGTTCCGATGCCCACATGACTG ATCAAGTTAACCAGGATGCACAAGTGAATGAAGAAGGTTCCATGCTTGTGGATGAAGGTGGCATTCAGAGCGGGATTGTA TCAACATAGGATGTTTCAAGTGGCATGGATGAATCTAATTTCACTCTTGAAAGCTGATCTTACTAACAAACACTTCAAAG GTACTAAAAGTTGAAGCTAATCTGTCACATCTGTGGCTTCTCTAGCCAACTTGGAACTTGCTTTTTGTAAAATGTCAAGT TTAGGAAGTTATAGTTACTTAGTTAAGGAAACCTCAAGTTTTACCGTATGCTGTTAAATCCAAATTTCACTGTCAATTTC ATTTAACAATTGATTTGGTGTTTCTATGTGCCATTGAAGAATGGTCATTTTTTTGGCTAAATTGGTGGGTGATTTTTTTT TTTTTCATTTGGTGTCACATGATGGTAATCATGTCAGTTAGGACCACTAAGGGCAAAAATTACATTTTAAAATTAGTTGG AATGTAGAACGTAGCTTCATCGGCCCAATTCCAAACTTTTGCGTGGCTTGAATTGCGCTTTTATCATAAGCCTATCTTGG GAGGACACATTTATGATTCATTTTAAGGTCAAGTTTATTGTTCAGTTTTATATTGTCTCCATCATTTATAAATAAAAAAT CTCAATTTTTTTCTTGATATAATTTGTCATCTATTTGATGGGGTTGAGAACAATTTATATACACCGA
CDS sequence (LotjaGi3g1v0175400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTGCTGAGAAACCAAGCTGGGTTAGCCATGAGGGCATGCAGATTTTCTCCATTGATGTTCAACCCGGTGGACTGAG GTTTGCCACTGGTGGTGGTGACCATAAGGTTCGCATATGGAATATGAAGTCTGTTAGTACGAACATGGAAAATGATGACG CTTCACAAAGGCTTCTTGCCACCCTGCGGGATCACTTTGGCTCTGTCAACTGCGTTAGGTGGGCTAAGCATGGAAGGTAT GTTGCATCAGGATCTGATGATCAGGTGATATTAATTCATGAGAGAAAGCCTGGTTCAGGAACCACAGAATTTGGCAGTGG AGAGCCCCCGGATATTGAAAACTGGAAAGTAGTAATGACTTTGAGAGGGCACACTGCAGATGTGGTGGATCTTAATTGGT CTCCTGATGATTCTGCATTGGCTAGTGGGAGTTTGGACAATACTATCCATGTTTGGAATATGAGCAATGGGATTTGCACT GCTGTTCTTAGGGGTCACTCGAGCCTAGTCAAGGGGGTTGCCTGGGATCCTATTGGCTCTTTTATAGCTAGTCAATCTGA TGACAAAACTGTCATTATATGGAGAACTAGTGATTGGAGTCTTGCTCATAAGACAGATGGTCACTGGGCAAAATCACTTG GGTCAACTTTTTTTAGGCGTCTTGGATGGTCTCCTTGTGGTCATTTTATCACCACCACGCATGGCTTCCAGAAACCAAGG CATTCTGCCCCTGTGCTAGAGAGAGGTGAATGGTCTGCAACATTTGATTTCCTAGGACACAATGCTCCAATCATTGTGGT GAAGTTCAACCATTCTATGTTCAGAAGGAATATCTCTAATGCTCAGGAAGTGAAGTCTGTGCCTGTTGGGTGGACCAATG GTGCCTCCAAGACTGGAAGCAAAGAGCCACAGCCTTACAATATTATTGCCATTGGTAGTCAGGATCGAACTATAACAGTG TGGACTACTGCAAGTGCCCGCCCTCTATTTGTGGCTAAGCATTTTTTTACTCAAAGTGTTGTGGATTTGTCCTGGAGCCC TGATGGATATTCACTTTTTGCATGTTCCTTGGATGGATCAGTGGCCACATTTCATTTTGAGCCAAAGGAACTTGGTGAGA GATTAGGTGATGCTGAGCTAGATGAGTTGAAGAGAAGTCGTTATGGTGATGTGAGAGGGCGCAAAGCAAACTTAGCTGAA AGTCCGGCACAGTTACTGCTAGAAGCAGCTGCTGCCAAGCAGACATCTAGCAAAAAGGTGGTTTCTGATGCCCAGCTACA CCTGACAATGACAAAGGCTTTTGTTCACGCTGGGGTTACTACAAAGAATGTCGAGCCTCAAGTTGATGATGGTATTAAGA GTGGAGGTCCAGCAGGGGATGGATCAGACAAAGTTACGACATCTGGTCGGATTTCTAGTCCTGTTAAACAAAGAGAGTAT AGACGACCTGATGGCCGGAAAAGAATTATTCCTGAAGCAGTCGGAGTGCAGCAGGAAAACATTTCTGGTCAGCAGGCACT TGATTTTCCTTTTGTGTCTTCTGATCACAGAAAGGCTCCTGACAGAGCTGTTTCTAATAATGATGACATAAGAGCAAGTA CATTGGGAGGTGCAAATTTCAGAAGTTCAGACTTAAAAGAGCGTTCTGGGGTTACTGCTAGGGCCACAATTTCTGAGAGC CTAGTGATTCAGAAAGTTCCAGCTTCTGCTGGTGATGGGAGCATCAATGTTGAACAGTTGGGCAACATGATGACTTCTAG TTCTTCAGCTTCTTCTGGTGCTACACTTACCATTAGGGTATTTGACAAGAAAGGCGATGACGGTACTTCACCTATTCTTT TGGAAGCACGCCCAAGAGAACATGTTGTAACTGACATTGCAGGGGTGGGAAATACATCCATGACGAAAGAAACAGAAATT TTGTGCACGAGGGGGCCTCATACACTTTGGTCTGATAGGATATCAGGAAAAGTCACTGTTTTAGCTGGTAACGTAAATTT CTGGGCCGTTGGGTGTGAAGATGGATCTCTGCAGATTTACTCCAAGTGTGGGAGACGAGCAATGCCTACCATGATGATGG GATCTGCTGCGACATTTGTAGACTGTGATGAATGCTGGAAGTTGTTGCTGGTGACAAGAAAGGGATCCCTTTACTTATGG GATTTATTTAACCGAACCTGTCTCCTTCAAGATTCATTGGCTTCTTTAGTCACTTCAAGTCCTAACTCATCTGCTAAAGA TGCAGGAACTATTAAAGTTATATCTGCAAAGCTATCAAAATCGGGTTCTCCTCTTGTTGTGTTGGCCACTCGCCATGCTT TCCTATTTGACATGAGTTTCAAGTGTTGGCTGAGGGTTGCAGATGATTGCTTCCCTGCATCAAATTTTGCCAGCTCTTGG AGTTTGGGTTCAATTCATGGTGGTGAGCTGGCAGATTTACAGGTTGATCTTAGAAAATATATGGCCCGGAAGCCAGGTTG GACAAGAGTGACTGATGATGGAGTGCAGACGCGTGCTCATTTGGAATCTCAATTGGCTTCTTCCTTGGCTTTGGGATCCC CCAATGACTATCGCCAGTGCCTGTTGTCTTATGTACGATTTCTTGCAAGGGAAGCAGATGAGTCTCGTTTAAGAGAAGTC TGCGAGAGTTTCCTTGGACCTCCAACAGGAATGGCTGAGGAAGCATCTCCGGATTCAAATAAATTAGCATGGGATCCTTT TGTTCTTGGAATGAGAAAACACCAACTCCTTAGGGAAGATATTCTTCCATCCATGGCATCGAACAGAAAAGTCCAGAGAT TGCTCAACGAATTCACGGATCTGTTATCTGAGTATGACATTGTTGATGATAATCAAGACCAAAGAAATCCCATGTTACCA AAGTCATCTTCACTAGGAACCAAACCAATCGAGAACGGTTCACTAGCAAAAGATCACGAGGAGAACTCTGATCATGCAGC CATGGATTGCCAGGACAATACTCTAGATCAAACTCGAGTTCTCCCAAATGAAGCAAGTTCCGATGCCCACATGACTGATC AAGTTAACCAGGATGCACAAGTGAATGAAGAAGGTTCCATGCTTGTGGATGAAGGTGGCATTCAGAGCGGGATTGTATCA ACATAG
Protein sequence (LotjaGi3g1v0175400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIAEKPSWVSHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNMKSVSTNMENDDASQRLLATLRDHFGSVNCVRWAKHGRY VASGSDDQVILIHERKPGSGTTEFGSGEPPDIENWKVVMTLRGHTADVVDLNWSPDDSALASGSLDNTIHVWNMSNGICT AVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHKTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPR HSAPVLERGEWSATFDFLGHNAPIIVVKFNHSMFRRNISNAQEVKSVPVGWTNGASKTGSKEPQPYNIIAIGSQDRTITV WTTASARPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGSVATFHFEPKELGERLGDAELDELKRSRYGDVRGRKANLAE SPAQLLLEAAAAKQTSSKKVVSDAQLHLTMTKAFVHAGVTTKNVEPQVDDGIKSGGPAGDGSDKVTTSGRISSPVKQREY RRPDGRKRIIPEAVGVQQENISGQQALDFPFVSSDHRKAPDRAVSNNDDIRASTLGGANFRSSDLKERSGVTARATISES LVIQKVPASAGDGSINVEQLGNMMTSSSSASSGATLTIRVFDKKGDDGTSPILLEARPREHVVTDIAGVGNTSMTKETEI LCTRGPHTLWSDRISGKVTVLAGNVNFWAVGCEDGSLQIYSKCGRRAMPTMMMGSAATFVDCDECWKLLLVTRKGSLYLW DLFNRTCLLQDSLASLVTSSPNSSAKDAGTIKVISAKLSKSGSPLVVLATRHAFLFDMSFKCWLRVADDCFPASNFASSW SLGSIHGGELADLQVDLRKYMARKPGWTRVTDDGVQTRAHLESQLASSLALGSPNDYRQCLLSYVRFLAREADESRLREV CESFLGPPTGMAEEASPDSNKLAWDPFVLGMRKHQLLREDILPSMASNRKVQRLLNEFTDLLSEYDIVDDNQDQRNPMLP KSSSLGTKPIENGSLAKDHEENSDHAAMDCQDNTLDQTRVLPNEASSDAHMTDQVNQDAQVNEEGSMLVDEGGIQSGIVS T
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 953 | 953 | 0.0 | – | |
| PANTHER | 1 | 953 | 953 | 0.0 | ||
| SMART | 1 | 41 | 41 | 0.0082 | ||
| Gene3D | 3 | 205 | 203 | 1.1E-47 | ||
| CDD | 8 | 361 | 354 | 4.81786E-44 | – | |
| ProSiteProfiles | 9 | 204 | 196 | 30.505 | ||
| ProSiteProfiles | 9 | 50 | 42 | 10.341 | ||
| Pfam | 10 | 41 | 32 | 0.015 | ||
| SUPERFAMILY | 15 | 362 | 348 | 1.36E-57 | ||
| SMART | 55 | 94 | 40 | 4.3E-7 | ||
| Pfam | 58 | 92 | 35 | 4.4E-5 | ||
| ProSiteProfiles | 62 | 92 | 31 | 8.637 | ||
| SMART | 114 | 153 | 40 | 9.5E-11 | ||
| Pfam | 116 | 153 | 38 | 5.9E-7 | ||
| ProSiteProfiles | 121 | 162 | 42 | 16.524 | ||
| ProSitePatterns | 140 | 154 | 15 | - | ||
| SMART | 156 | 195 | 40 | 3.3E-7 | ||
| Pfam | 159 | 194 | 36 | 1.0E-5 | ||
| ProSiteProfiles | 163 | 204 | 42 | 13.015 | ||
| SMART | 250 | 322 | 73 | 0.44 | ||
| SMART | 325 | 365 | 41 | 0.4 | ||
| MobiDBLite | 445 | 482 | 38 | - | – | |
| SMART | 643 | 681 | 39 | 310.0 | ||
| Pfam | 684 | 883 | 200 | 1.3E-50 | ||
| MobiDBLite | 949 | 973 | 25 | - | – | |
| MobiDBLite | 955 | 970 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Chromatin organization | Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin. | ||
| Biological process | Transcription, DNA-templated | The cellular synthesis of RNA on a template of DNA. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi3g1v0175400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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