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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0179500 |
| Transcript ID | LotjaGi3g1v0179500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | OTU domain-containing protein; TAIR: AT2G27350.1 OTU-like cysteine protease family protein; Swiss-Prot: sp|Q3U2S4|OTUD5_MOUSE OTU domain-containing protein 5; TrEMBL-Plants: tr|G7IHG3|G7IHG3_MEDTR OTU-like cysteine protease; Found in the gene: LotjaGi3g1v0179500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:25007604..25014405) extracted from Lotus japonicus Gifu genome v1.2.
AACTCGCCGCGTGTCGTCGGAGAAGGATTTGAGTCACGTGCCACTCTCTTTCTTTCATTTCACCGTTGAAAGCAAACTTG TCATCTTCGTTTTCTTTCTCTCTCAACATTCCAATCTTCCTCTCTCAGTTTTCTCTCAATCAAACAAAACCCTAATTTCC TCTCTTTCGAACCATTCCTACTCTCATTCTTTCAGGTTCAACTTCATCAACTCTCTCTCTCTCTCTCAATCTTCCTCTGT GTGAATCTGTATAATTCGAATTGCAATTTTGTGTTTCTTTTGTGTTTTTAGTCTTATTGATTGATGTAATTTGAAATTGA TTGTTCTTGAAAACGATGGTTGCATTGAATTTTGATGGTGGTGGTTTTGGGTGGTGCAGGTCGCGCTCGCGGAGGAGGCG GAGGAGGAGATCATTTTCCGGCGGTGGAGAACAATCACTCTTGGTAAATTCGACTTCTCAAAGAAGGTTTTGTTGGTTTA ACGTTGAAGCTCTGGGTCTGATGAGAATTATTAGGGGAATGCAGAGATCGTTTTGCTGCGAGGATCTCAACATCAACAAC AACAAGATCAAGAACAACAAGAAGAAATCGTCCAGCCAAGGTATCATTGGCATCACTGCGCCCAAGGCCAGAACACGCGA CAAACGGTTGAGGGGTAGGGTTTAAGGTCAGCTGAGGAGATTGCTGTATCATGACTCGAATCTTGGTTCAGCGCGGTTCC TCTGGTGGTGGTTCTTCTTCGAACCAGAATTTGAGCCGCTCTCCGGCTCCGGTTGCCAAAGATGAGGAATGTGGAGAGGA GGTGCCTGGTGGACAAGTTGCTGTTGGTGATGAGATTCTGGAGTTTGCTGGGAGTAGTGACTGTAATAGGGCTAAGAGTG ATGAAGTTTTGATGGAGAGTCTTGATCTTGAGCCGAATGAGAGCACCCCATTAGGCGATGATGAGGTTACTGATGCCGGC GGCAAAGATGTTAAGGAAGATGTTGCGGATGGACAAGAATTGGCGAGAGGGTTCAGTGGAGAAAGGACAGTGTTGGAGAA TGAGGGTTTGGTTGGGGATTCGCCCATCGTTGCTGGTGGTAGTTCACATCCGCCACCTCCTCCTGTTCCACCTCCTAAGC CTTCAGCCACTAACTTAAATTCGAGGAGAAATGTTTCAGGGACTTCAAATGTAGGATCACCAAGGAGAGCTTCTCAATGG CCTGTTGTTTCTGCTAGGACTTCACCTGCTGGGTCTCGGCCTTCCTCCCCCAGGGCTCATAATGAAAGTGAGGGGTACAA TAGTGCTGACGAACAGAATCCATGCTTGGTGTCCTCTTATGGTGATTTGGTGAGTTGATGATTGTACCACTCTAATTATG TTATGGTTCTTTAGTTTCAGTTAGATGATTGCATAATTAGACAAAGCGGCGATGCTTCAAATTTTCCGGTACTTGATTCT TTTAGTTAGGGTATCATTATATTTATGGCTTGATTCTAGGAAAATACTTGTTAAGTTGTTAGGAATAAGGTGGACAATTT GGTACTTATCCGCATGCTATAAGAGAAGAACCACGGTAATGAAGTTACATCTAAGTTCTTAACTATATTTGTAAACATTC CTCTATAATTTTTTTCCAGTTATGACACAAATCACTTGCATGTTGCATTCATTACGGCATAGTTATGAGTTATGACAAAG CTGTCTGTTAGGTTCCTATATGGGGAAGTATATGTTTGTTTGATTGTATCTTAATTGCTTGAAGATGTTGTAATGCAGTG TTGCTTTTAATTTAATAATGCAACTTTGTTGCTTGATGGCCTTCACTGGGACAATCGTCATATTTTGAAATGATATTTAC ATCTATTTCAGGAAAGAGAGCGACAGTTTGAAATTGATATCAGAAGGGCAAAAGGCTATGAAGTAAAAAGAATGATGGAG GATGGAAATTGCCTTTTCCGTGCTGTTGCAGACCAGGTGTATGGGGACTCTGAATTGTATGATTTGGTCAGACAGATGTG CATAGATTATATGGTATGGACTATGAGTATGTCGTACTATATATGCATTCCCCCCCCCCCCCCCCCCCAAAATATCCACA TCTCTGCTCTAGTTGATCACAATATAAAATGGACTTCATTTGGTTAGGAGCTAGTTATTTTTATGCGATACTGATTTGAT CTGTTTCTATTTAATTGTCTTTTGACAAAAGGATGGAACCTTAAAGGTCTCAATTCTCAGATAGGCTTAGTATTTGTAAT TTTCAATCAATTATTGACATTGGTTCTACCAGTTGAGGAATGCTTGGTTTGGGGTTTTTTAAACTGGACTTTACAATTAC AGACTTACAGTAAGCGATGTAAGAACACTTGTTTCAAGGTATAGAGATTAATCGTAGGGTGTAGAAGGTCTTTATCGTGT GTAGGCTTCACTATGTGCATGCTGGAATTCCTGGGCAGTATAAAATTTTACTATGATTCTAGCTATCTTTTGGGGCAAAC TCAGATGTTATGGTTTTGAAAATGGGTTGGTTTTATTTTCGAAGATATAGGATTAGAAGATACTCCCTCCGTTCCTATAT ATAAGTCACAAATAACTAATTCTCTTAGATTAAGAAAAGTAGTTATTAGTAATAAATTTGTAAAAAAAATGATTTACTTT CCTAGATTACCCTTATTTACTTTCCTATGATTTTCTCTCTCCAAGTTAATACTTCTAAAGTTTATCATCTCTTTCATATT AACTATGAGGGTGAACTTGGAAAAAATTATTTAATGCTTCCTAGATATTAGAAAGTGACTTATATTTTGTAACAAAATTT TTTCAAAAAATGTGACTTATAATAGGGAACGGAGGGAGTAAGAGCAAAGGACTTCAATTTTGCTATCAAAAGTAATGTGG CAAATTGAAATATGAAGAATGTTGGAGAAACTGAGAAGGGCAAATTTTAAACACTCACTTGTATAGAGTATTCTACCCTA GTAGAGGCTGATTAATTCAGAGCCAATGGTTTGAAGGAAGTATTTTCTTAAAAACAAAAAAGATGCCAGTAACTGGGCTG GCCAATTTGTATTTGCTCATTTTAGTTGAAGTCCCTTAATTTCTCACTTCTGCTTTGTTAGCAGTTTGCACCATACTATT CTAGTTTTGCTTTTTATTCATTCTCTCTGATTCTATTAAATTATTGTTTGTGAATGAAATTAACCTCCTATCATGGTCCG ATTCTATGATCTTCCATTTTTGCCATATAAATGCAACTTCCTGGATTTTTCTTGCTCACATGCTTTGCTTGCAGTTTGGT TGAGCTTCAGAATAAGTGTTACTGGTTTTTTTGTCTTCAGGAGCGTGAGAGGGACCACTTTTCTCAATTTATAACAGAAG GTTTCACATCATACTGTAAGAGAAAGAGAAGAGATAAGGTATGCCTCGATACAGTTTTTTTGGTTTTTGTTTTTGTTTTT TGCCGTTTCTTGACACTAACTAATACCAAGTTTCCAACAACATTTGGTTTTTAGGCTTCTTAAACAAACACACCATTTTT TTCCTATGGGCTGTATTGTTCTGCGAATTACTTCTGGAACAGTTTCGGGTGAAATTTTCCACTAATGTTTTCAAAACTGG TGCTTCAGCACTTACTAATGGGTAGTTGAAAATTAATGTAGACTTTAATTAACAAAAACAACAACTAAGCCTTCCCCCAC TTGGTGGTATTGGCTATATGTGGATCACATGATGCCATAATGCATTATCATGTATAATGCTAAAGAATAGACAATTTACC TCTACATCTCTCTTGATGGTTTGCATTAGCTTTCCTTGATTTCCTTAATTCAACTATCTGACTATCCTCCATCTCCTCCA TGCATTGAAGACTTTAACATGTCAAGTAATCTAAATGTGGGTTCTAATTGTTCACTTATCCCAGCCCTTTTTCTTTCTTA CCATATTGGTTTTGATAAGTTATCTGTCTTGTGATTCTTAATTTGGTTATCATTTTCTCTACCGGCTCCCTACTTCTAGT TCCAAATTTTCAATGGGAGACCCCCCCCCCCCCCCAAAGTTTGTTTGTGTCAAAATATCATGGATTTTACTTTTTTCTCT AAGATGTTTTGGCAAGCTCATTTTACTTTAGCTTGCTAATTCTTTCATGAACGATAACAAGTTTTGTCATGAGGGACTGG ATGTTAAAGTCTATAATACATCTGGGCCTCTCTTGCAGGAAATCATATCATCATTCTCATTACTAAGGGAATTATATGCA TCCTTGTTATTAATTAAATAGTCAATTGAATTGGTCGGGATCTAGGCATGGTTCTTTGGTGTTCAGTTTAGGGGCAGTTG CTGTAAATTTTAATCACTTGTAGTTAGTAATAAATAGTTTGGCTCTGTATCCATACCATAAATTTTATTTGAAATCTTAC ATGACAATCTCTTCAGTCTCTTGGTGCTTCACGTACTCTATCTACCATTTTTGTAAAGTAATTATGTAAATGTACTGCTT ACTTTATTCCTAAAATGATATATATTGGTTGAAGTAAAGCCTTGTGTTGGTCTTTTAAACATGGTGAAGTTATGATGTGG GCAGTAATGAATACTAGCATTAACTGGTTTTTTATTGGATAGATGCATTAAAATGCATAGAAATAACCCATTTGATATGT TTGAGAGCTAAAACATGCGTTTTTTAAATGATAATGCTTGTGTTGCACAGTTATCTGATTTATAAATTGTAATATCTAAG ATGAAAATCCAATTATTGGTACCCAGTGGACATGTTACCCTCTCTTGATCTCTAATGTCTTCCACAAATTTCATGGTCGA TTTGTCTCCTTTATAGTAATTATTCACTTTAAATGGAAAAGTAAGAGATCTCAACTATTTATGGAAAACATCAACTGATG TCTGCTGGTATTACGTGTAAATGCATGACAGCATGAGTCATGACAAACTACAAATTTTCTCACTGATGATTGAGCTTTTA CCCTTCCTCTTTCCCTTTACAGGAGTCAAGTTATTGTATTAAATTATTCCTTTTTTCATGAATGCTACATGCAGTTTTAG TCAATCTGAAATTGTTGTATGGTACTTTAACATTCTGATTTAGACGTAAATGTTCTTGCCCTGCTTGGCAGGTCTATGGT AACAATGTTGAGATCCAAGCCATGTCTGAAATGTATAATCGTCCTATTCATATATACTCCTACTCTACAGGTATAGCTTC TGTCTAAATTTACTTCTTGTGATTGTTGTTAGTTATTTACTATTTAATTTAACAACATCGTTTATTGACGCAGAACCTAT CAATACATTTCATGGAGGCTATAACACTGATACACCACCAGTACGGCTAAGTTATCATCATGGGAATCATTACAACTCCC TCGTTGATCCACGCCGCCCAACAATTGGTGCAGGACTTGGGTTTAGCAGTCTCCGTGGGGTGAGTGCTTTGTTATTATTG CATGAATTGCTGACACTCTTTTTTTCACTTCACCTTCTGATGAAATGTCAAGAATATAGCTTTATCTTCCAACTGTAAAA AAAAACGTCAAATTGAATTATGCATTGAATCTTTGTAGAAAACCTCAAGATTTAAGAAACATCTAGGAACCCTGTAACTT GTAAATTGAATCATTATTAAATGGAATATTTAGTTGAATAATGGTTGATGGTATGCTTTTATTTACAATGCAGGCGAATG TTGACAGAGATCAAGTCAAGGCTGCTATTAAAGCTCAGCAAGACCAACAGATCGATAATGCAAGTACTTCAAATTGTTAA CAGGTTGAACACTTTTTTTTAATGAGGCTGGTGACCTGAGTTTTTTCAACTTCTTTCAACAGGCACTTTTAGCTGAGGGA CGGTTTTACTCTGATCTTGAGCTCACAGAGAAGGAAATTGAACGTGCCGTGATTGAAGCTTCTCGGGCTGAGTATATTGC TAATGATACATTTAAGCACCAACTTGGTTATAAAGAATCCTCTACATCAAATGCTGAGCCATCGTCTTCTGGAGCAAGTA AGTTTATCCCCTCAAACAAGCTGGTCTACTTGGTTGAAAAATCAAAAGTAGTAATTTTTTTTAGTTCTCTTGGTTGCAAC GGCATTAATGCCTGGAAGTCTGAGACTATGAAATCAATTAGAGTAGCAACAACGGCACAACACAAGTCTTATCCTTCCAA GTGAGGGCGGCTATATAGATCACGCCATGTCATTGTGCTCAGTCAAAAACCAAATTTTGTGGGATATTATTGACCATGAG TATAACTGAAGTAGTTTAAGAAATTTTCCTCCCCACCCCCTTTCCCTTAAAATTTTGCTTGGAATGCACAAGTTAACTGT GTATTGATGCTGAGTGCAGGATCATCAGGTAGGGATCCGAAGATGGAACCCGTGAAGGAGAATGATTCTGGTCTTAGCTG GAGTATGCAGATGGTGCTATCAATGGGATTCAGTTACCTACAAGCGATTGAGGCCTACAGCATATTTGGGGATGATGTTG ATTCTATGATTTGTTACCTGTTGGAAACTGGCAGTAGCAGCAGACGGAAAGGAAAGGCCACTGAATAATTAGAGATCGAG TGTAATAAAAAGTCTTAGAACTTTAGTTTTCAATTGTCTTATATATATCAAATAAATCTCCTGTATAATTCACTCTAGTT TTTATTTCGGATCTCGCATCTTTATCAAGGTAATGGGGGAAAAACGGAAAAAGACTATTGAGATAAGTAGCAAGACGCGT ACTTTGAGTTTTAGCGAGAAAACGAAGTGAGTACTTTGAGTTTTAGCGAGAAAACGAAGTGAGAGACTAAACAAACCGGT TC
CDS sequence (LotjaGi3g1v0179500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTCGAATCTTGGTTCAGCGCGGTTCCTCTGGTGGTGGTTCTTCTTCGAACCAGAATTTGAGCCGCTCTCCGGCTCC GGTTGCCAAAGATGAGGAATGTGGAGAGGAGGTGCCTGGTGGACAAGTTGCTGTTGGTGATGAGATTCTGGAGTTTGCTG GGAGTAGTGACTGTAATAGGGCTAAGAGTGATGAAGTTTTGATGGAGAGTCTTGATCTTGAGCCGAATGAGAGCACCCCA TTAGGCGATGATGAGGTTACTGATGCCGGCGGCAAAGATGTTAAGGAAGATGTTGCGGATGGACAAGAATTGGCGAGAGG GTTCAGTGGAGAAAGGACAGTGTTGGAGAATGAGGGTTTGGTTGGGGATTCGCCCATCGTTGCTGGTGGTAGTTCACATC CGCCACCTCCTCCTGTTCCACCTCCTAAGCCTTCAGCCACTAACTTAAATTCGAGGAGAAATGTTTCAGGGACTTCAAAT GTAGGATCACCAAGGAGAGCTTCTCAATGGCCTGTTGTTTCTGCTAGGACTTCACCTGCTGGGTCTCGGCCTTCCTCCCC CAGGGCTCATAATGAAAGTGAGGGGTACAATAGTGCTGACGAACAGAATCCATGCTTGGTGTCCTCTTATGGTGATTTGG AAAGAGAGCGACAGTTTGAAATTGATATCAGAAGGGCAAAAGGCTATGAAGTAAAAAGAATGATGGAGGATGGAAATTGC CTTTTCCGTGCTGTTGCAGACCAGGTGTATGGGGACTCTGAATTGTATGATTTGGTCAGACAGATGTGCATAGATTATAT GGAGCGTGAGAGGGACCACTTTTCTCAATTTATAACAGAAGGTTTCACATCATACTGTAAGAGAAAGAGAAGAGATAAGG TCTATGGTAACAATGTTGAGATCCAAGCCATGTCTGAAATGTATAATCGTCCTATTCATATATACTCCTACTCTACAGAA CCTATCAATACATTTCATGGAGGCTATAACACTGATACACCACCAGTACGGCTAAGTTATCATCATGGGAATCATTACAA CTCCCTCGTTGATCCACGCCGCCCAACAATTGGTGCAGGACTTGGGTTTAGCAGTCTCCGTGGGGCGAATGTTGACAGAG ATCAAGTCAAGGCTGCTATTAAAGCTCAGCAAGACCAACAGATCGATAATGCACTTTTAGCTGAGGGACGGTTTTACTCT GATCTTGAGCTCACAGAGAAGGAAATTGAACGTGCCGTGATTGAAGCTTCTCGGGCTGAGTATATTGCTAATGATACATT TAAGCACCAACTTGGTTATAAAGAATCCTCTACATCAAATGCTGAGCCATCGTCTTCTGGAGCAAGATCATCAGGTAGGG ATCCGAAGATGGAACCCGTGAAGGAGAATGATTCTGGTCTTAGCTGGAGTATGCAGATGGTGCTATCAATGGGATTCAGT TACCTACAAGCGATTGAGGCCTACAGCATATTTGGGGATGATGTTGATTCTATGATTTGTTACCTGTTGGAAACTGGCAG TAGCAGCAGACGGAAAGGAAAGGCCACTGAATAA
Protein sequence (LotjaGi3g1v0179500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTRILVQRGSSGGGSSSNQNLSRSPAPVAKDEECGEEVPGGQVAVGDEILEFAGSSDCNRAKSDEVLMESLDLEPNESTP LGDDEVTDAGGKDVKEDVADGQELARGFSGERTVLENEGLVGDSPIVAGGSSHPPPPPVPPPKPSATNLNSRRNVSGTSN VGSPRRASQWPVVSARTSPAGSRPSSPRAHNESEGYNSADEQNPCLVSSYGDLERERQFEIDIRRAKGYEVKRMMEDGNC LFRAVADQVYGDSELYDLVRQMCIDYMERERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMSEMYNRPIHIYSYSTE PINTFHGGYNTDTPPVRLSYHHGNHYNSLVDPRRPTIGAGLGFSSLRGANVDRDQVKAAIKAQQDQQIDNALLAEGRFYS DLELTEKEIERAVIEASRAEYIANDTFKHQLGYKESSTSNAEPSSSGARSSGRDPKMEPVKENDSGLSWSMQMVLSMGFS YLQAIEAYSIFGDDVDSMICYLLETGSSSRRKGKATE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 42 | 42 | - | – | |
| MobiDBLite | 1 | 25 | 25 | - | – | |
| MobiDBLite | 73 | 204 | 132 | - | – | |
| MobiDBLite | 86 | 102 | 17 | - | – | |
| PANTHER | 104 | 455 | 352 | 2.0E-196 | – | |
| PANTHER | 104 | 455 | 352 | 2.0E-196 | – | |
| MobiDBLite | 130 | 145 | 16 | - | – | |
| MobiDBLite | 146 | 204 | 59 | - | – | |
| Gene3D | 211 | 362 | 152 | 6.2E-62 | – | |
| SUPERFAMILY | 216 | 352 | 137 | 2.94E-37 | ||
| ProSiteProfiles | 229 | 352 | 124 | 19.067 | ||
| Pfam | 237 | 346 | 110 | 6.0E-17 | ||
| MobiDBLite | 433 | 451 | 19 | - | – | |
| MobiDBLite | 433 | 464 | 32 | - | – | |
| ProSiteProfiles | 459 | 505 | 47 | 9.101 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0179500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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