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LotjaGi3g1v0239700.4

Overview

Field Value
Gene ID LotjaGi3g1v0239700
Transcript ID LotjaGi3g1v0239700.4
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT2G30980.1 SHAGGY-related protein kinase dZeta; Swiss-Prot: sp|Q39010|KSG6_ARATH Shaggy-related protein kinase zeta; TrEMBL-Plants: tr|G7IM77|G7IM77_MEDTR Shaggy-like kinase dzeta; Found in the gene: LotjaGi3g1v0239700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:38762739..38766884) extracted from Lotus japonicus Gifu genome v1.2.

GAATTCAAAGTATTGACTATGACTACTAAATTGGCTTTGTATATATGCATGTCCATTAGTGAATTTGCTGACTCATGCAT GTGATACATGATAGGCACATGACATTGCCATGTTAAGTAAATGCTTTTAAACAAAATTATTGATGATAATTGCTATTAAG CTAATTTTGGCTGTTAGTTAATTGAGTCAACTCGATAAGCTATCACTGGTATTGTATTATAAAGAGTTTTATATTCTATT TCTGCATTAGGAGAATTGGTTTACCATATTAAATATATATTTATTGCTATGAATTGCAGGAAATGTCAGCTTCTGTCGGT GAGGGTAATGACGCAGTTACCGGTCACATAATCTCAACCACAATCGGAGGCAAAAATGGTGAACCTAAACGGGTCTGGAT GTGTTCTAACCTTCATTCTCAAATTCCAGTTTTTAAAAATTAATTTTGTACTTAAAATTTTACTTCCTTTGTGGGATAGA GTGGAACTACATTTTGGGCTGGGTAATTAAGTTAAAATCTACCCTTTTATTAATGATTCATCCAAAAGTTTATTACTATT AATCACCTAGAAGTTGGGTTACTTTCTTGGAGCCTATCTAATCTAATAGTTCCTTTTTTTATTTTATTTTAATTCTTCCC CCCTTGTGCCAATTGATAATTTTTTGTTTCCCCTTTTGGACCCTAAAAGGTAGTCTTAAAAAATTTCAATGTTTTGAGTG ATGTATTAATAGACTATTGATGATAGCATCCTCAGGTTTCAATTTCTTTAATTGTTTCATAAATTTATGCTCTAATATCA ATTGCAGACCATCAGTTACATGGCTGAACGTGTTGTTGGCACTGGATCATTTGGAATTGTTTTCCAGGTAAGGATAAATG AAGTAATAAACTCGAAGGTGATATCTATTCCTACTAAGCATTCTCTGCTGTCAAGTATCTCATATTGCTTCATGCCCACG GGTTTTGTACCTTTTTGACCTGGAACAAAGGCAAAGTGCTTGGAGACTGGGGAAGCAGTGGCCATAAAGAAGGTTTTGCA GGACAAGAGGTACAAAAATCGTGAATTGCAGTTAATGCGGGTGATGGATCATCCAAATGTGATTTCCCTGAAGCACTGTT TCTTCTCTACGACAAGCAGAGATGAACTTTTTCTGAACTTGGTAATGGAATATGTCCCTGAGACATTGTACCGAGTTCTA AAGCACTACAATAATATCAATCAGAGAATGCCCCTAATCTATGTGAAATTGTATACATATCAAGTATGGAGTCTTCTCTA TTTGCAATTTGGTTTCTTATGTTGTTCCTCTCTTTTTTGTTTGTAATCTTCTAATGATTGTGTTGGGATGTGATGTTTAG ATCTTTAGAGGACTAGCATATATCCATACTGTACCAGGAGTTTGCCATAGGGATGTGAAGCCTCAAAATCTTTTGGTATG TTATTCATTTGTTACTTTTCCTCTATGATTTGCACTCTTTTATTCTAAACCTATCACATGTTTGTTCTGTAGGTTGATCC TCTCACTCACCAAGTTAAGCTTTGTGATTTTGGGAGTGCAAAAGTTCTGGTATGTTGGTCTGCATTCTTCTTGTGCTTAT CATTACTTCGTAAATGCATGATACGATGCTGTTAGTGGAATAGTGAAGTCTTGTGCTACCTATAGGTAGGTAGCATATGA CTTAAGCATGTTTGATTTGTCCAAAATTGCAATTTTAATTGTGTATGTGATGAATGACATTTCAGTTAATAGTCGTTAAA ATATATATGTTGCGATTAATATGTACCCCCCCTGATTTCTTTTTCGGCTTAAAAATATTTTTGGTAGGCCTCACATTTAT CAAAATAGTGTGTTTTTAGTCCTTCACATCTATGCTTTAAAGTTTTAGTGCTAAAAGCACATGGTTTTTGTATTTTAAAG GACTTAAAATGGAAACTTAAAATATAGAGGACTAATTTCAAAACATGTCGCATTTTTAGGGAGAAAAAAGATATTGGTTG GAATCAATGCTAATTTTGGTTACAATTATTTGGTTTAAAAAGATAAAGTATTAAAGTGTAATTGTTATGATTTTATCTCA GGTCAAAGGTGAATCAAACATTTCGTACATATGTTCACGGTACTATCGAGCGCCGGAACTAATATTTGGTGCGACAGAAT ACACAACTTCTATTGATATTTGGTCTGCTGGTTGTGTCCTAGCAGAACTACTTCTAGGCCAGGTTAATTTTTTTTTTGGG TAACTTATGCACTAATGTTGCACGTACAAAATAAATGTTTTCCCTTTGTTTTTGAGATATGTTATCTTGATTTCTCATAG TTTGAAATGTTTCTTTAGCCATTGTTCCCCGGTGAAAATCAGGTGGACCAACTTGTGGAAATTATTAAGGTGATCCTCAT TTATTCTCAGATGTCACCCTAGATTGCTTGAATATAAGTACAAAGAGATAATAATTTGGGTGTCTTTTTATAGGTTCTTG GTACTCCAACTCGAGAAGAAATTCGTTGCATGAACCCTAATTATACAGATTTTAGATTCCCCCAGATTAAAGCTCATCCT TGGCATAAGGTAATTGCATTCCCTGCCATTCCTCCTTTTGCTTTGTAACAATGGTTTTTCTGGTTGATTGATGCCATGAT TCCTGGTTCAGGTTTTTCACAAGCGAATGCCTCCTGAAGCAATTGACCTCGCATCAAGGCTGCTCCAATATTCACCAAGT CTTCGTTGCAGTGCAGTAAGTTGGGCAAACCCTTATACCTTCTCCACCTCCCTCCTTGGTGAAGGCACAAATAGAGAAAT AGCATAGCAGTAATATGTTAAACAAACCTTGATATAAAATATATTTACATACATAGTAGTCAATCCCGGATCGCGGCGCG TAGCGGCCGACCCCAAAAGTGGGATAGCGGGATAGCGGATAGCGGGATGACCGCTATTTTGATTTTTCACATATAATATT ATATAACTAATATATACATATAATTACTAAAAGAAAGGAAAAAAAAATAGAGGAAAAGAAGAAAAAAACAGAGCAACTCA GAACAGAATAAAGGCCCAAGGGTAAACAGGGGTGGTGGTCGCCGGAGCCTGGACGGTGCTTGTCAGATTGCGCCGCGGCC ATGGGTTCTGGACTTCTGGTCGAAGGTGGCTGAGGGGAAGCAAGTCGCGCCGGAGAAACGCGTTGAAGAAGGTTGCAAGT TGCAGAGGAAACGCGTAAAGAAAGAAGAAACGCGTGAAGAAGACGAGTGAAACGGTGCGTTTCACTTATTAAGAGCGAAA TTCCAAAAGTACCCTCAAATTTTAACCTAATTTACAATTTTGAGGGCAATTTGGGGATTTTCCTTGAACCCAACCCATCT TCAACCTGGAGCACCGCGATTGAACGCGATCGAACGCGATTTGGACGCGATTTGGACGCGATTTGGCCGCAATTCGCGGC GCGACAGCCGCGACGGCGTTCCGCGACGCGATCGATTCAAAATCGCGGGGAAGGGCCGCGACGCGACGGCGCTATCGCGC CGCTATTTGCCGCGATCGATAACTATGTTTACATAATTACATAAACATAAGAAGTTCCCTTGTTTCTTATATTGTTGCTC TGAGATTTGATCCACATGCCTTGGTATGTCATGTTTTAGTATGGTGGTTGATTTCTGCGATAAAGTATTTTTACCAATGA GATTCCATTATAATCACTGTTTATATTTTATTTGAAAATATTAGTATACATAGCATAGTTTTCACTAGTGGATTTTATAT TTCAGCTGGAAGCATGTGCACATCCTTTCTTTGATGAGCTTCGTGAGCCCAATGCCCGGTTACCTAATGGCCGTCCATTG CCGCCACTTTTCAACTTCAGACAGGAAGTATGTATCTAGTTGCCAAATTGGTTTCTTCTATTAACTAGTCATAGCTTCTT TTTACTGTAACCTATGTGCGCACCAGGCTTACATGGCAATTTTTGTTGAAGCGCAATTCCGATAGAGTCTGGGTTGAAAT GTTGGTAAAGGAATCAATGGTTCTAATTAAAATTATGTCTGCAGTTAGGTGGAGCATCCCCTGAACTGATCATTAAACTC ATACCTGAGCATGTGAGGCGGCAAACTGGTCTTAGCTTCCCATATCCGGCTAGCACATAAATGTAA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0239700.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCAGCTTCTGTCGGTGAGGGTAATGACGCAGTTACCGGTCACATAATCTCAACCACAATCGGAGGCAAAAATGGTGA ACCTAAACGGACCATCAGTTACATGGCTGAACGTGTTGTTGGCACTGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCT TGGAGACTGGGGAAGCAGTGGCCATAAAGAAGGTTTTGCAGGACAAGAGGTACAAAAATCGTGAATTGCAGTTAATGCGG GTGATGGATCATCCAAATGTGATTTCCCTGAAGCACTGTTTCTTCTCTACGACAAGCAGAGATGAACTTTTTCTGAACTT GGTAATGGAATATGTCCCTGAGACATTGTACCGAGTTCTAAAGCACTACAATAATATCAATCAGAGAATGCCCCTAATCT ATGTGAAATTGTATACATATCAAATCTTTAGAGGACTAGCATATATCCATACTGTACCAGGAGTTTGCCATAGGGATGTG AAGCCTCAAAATCTTTTGGTTGATCCTCTCACTCACCAAGTTAAGCTTTGTGATTTTGGGAGTGCAAAAGTTCTGGTCAA AGGTGAATCAAACATTTCGTACATATGTTCACGGTACTATCGAGCGCCGGAACTAATATTTGGTGCGACAGAATACACAA CTTCTATTGATATTTGGTCTGCTGGTTGTGTCCTAGCAGAACTACTTCTAGGCCAGCCATTGTTCCCCGGTGAAAATCAG GTGGACCAACTTGTGGAAATTATTAAGGTTCTTGGTACTCCAACTCGAGAAGAAATTCGTTGCATGAACCCTAATTATAC AGATTTTAGATTCCCCCAGATTAAAGCTCATCCTTGGCATAAGGTTTTTCACAAGCGAATGCCTCCTGAAGCAATTGACC TCGCATCAAGGCTGCTCCAATATTCACCAAGTCTTCGTTGCAGTGCACTGGAAGCATGTGCACATCCTTTCTTTGATGAG CTTCGTGAGCCCAATGCCCGGTTACCTAATGGCCGTCCATTGCCGCCACTTTTCAACTTCAGACAGGAATTAGGTGGAGC ATCCCCTGAACTGATCATTAAACTCATACCTGAGCATGTGAGGCGGCAAACTGGTCTTAGCTTCCCATATCCGGCTAGCA CATAA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0239700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSASVGEGNDAVTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDKRYKNRELQLMR VMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETLYRVLKHYNNINQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDV KPQNLLVDPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENQ VDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCSALEACAHPFFDE LREPNARLPNGRPLPPLFNFRQELGGASPELIIKLIPEHVRRQTGLSFPYPAST
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24057:SF50
2 374 373 1.1E-250 –
PANTHER
PTHR24057
2 374 373 1.1E-250 –
Gene3D
G3DSA:3.30.200.20
19 113 95 6.2E-33 –
CDD
cd14137
29 321 293 0.0
IPR039192
SUPERFAMILY
SSF56112
33 342 310 1.03E-88
IPR011009
Pfam
PF00069
34 318 285 6.2E-64
IPR000719
SMART
SM00220
34 318 285 5.5E-88
IPR000719
ProSiteProfiles
PS50011
34 318 285 44.301
IPR000719
ProSitePatterns
PS00107
40 64 25 -
IPR017441
Gene3D
G3DSA:1.10.510.10
114 361 248 1.1E-78 –
ProSitePatterns
PS00108
155 167 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0239700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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