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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0239700 |
Transcript ID | LotjaGi3g1v0239700.5 |
Related isoforms 5 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase family protein; TAIR: AT2G30980.1 SHAGGY-related protein kinase dZeta; Swiss-Prot: sp|Q39010|KSG6_ARATH Shaggy-related protein kinase zeta; TrEMBL-Plants: tr|G7IM77|G7IM77_MEDTR Shaggy-like kinase dzeta; Found in the gene: LotjaGi3g1v0239700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:38762745..38766600) extracted from Lotus japonicus Gifu genome v1.2.
TGCTATGAATTGCAGGAAATGTCAGCTTCTGTCGGTGAGGGTAATGACGCAGTTACCGGTCACATAATCTCAACCACAAT CGGAGGCAAAAATGGTGAACCTAAACGGGTCTGGATGTGTTCTAACCTTCATTCTCAAATTCCAGTTTTTAAAAATTAAT TTTGTACTTAAAATTTTACTTCCTTTGTGGGATAGAGTGGAACTACATTTTGGGCTGGGTAATTAAGTTAAAATCTACCC TTTTATTAATGATTCATCCAAAAGTTTATTACTATTAATCACCTAGAAGTTGGGTTACTTTCTTGGAGCCTATCTAATCT AATAGTTCCTTTTTTTATTTTATTTTAATTCTTCCCCCCTTGTGCCAATTGATAATTTTTTGTTTCCCCTTTTGGACCCT AAAAGGTAGTCTTAAAAAATTTCAATGTTTTGAGTGATGTATTAATAGACTATTGATGATAGCATCCTCAGGTTTCAATT TCTTTAATTGTTTCATAAATTTATGCTCTAATATCAATTGCAGACCATCAGTTACATGGCTGAACGTGTTGTTGGCACTG GATCATTTGGAATTGTTTTCCAGGTAAGGATAAATGAAGTAATAAACTCGAAGGTGATATCTATTCCTACTAAGCATTCT CTGCTGTCAAGTATCTCATATTGCTTCATGCCCACGGGTTTTGTACCTTTTTGACCTGGAACAAAGGCAAAGTGCTTGGA GACTGGGGAAGCAGTGGCCATAAAGAAGGTTTTGCAGGACAAGAGGTACAAAAATCGTGAATTGCAGTTAATGCGGGTGA TGGATCATCCAAATGTGATTTCCCTGAAGCACTGTTTCTTCTCTACGACAAGCAGAGATGAACTTTTTCTGAACTTGGTA ATGGAATATGTCCCTGAGACATTGTACCGAGTTCTAAAGCACTACAATAATATCAATCAGAGAATGCCCCTAATCTATGT GAAATTGTATACATATCAAGTATGGAGTCTTCTCTATTTGCAATTTGGTTTCTTATGTTGTTCCTCTCTTTTTTGTTTGT AATCTTCTAATGATTGTGTTGGGATGTGATGTTTAGATCTTTAGAGGACTAGCATATATCCATACTGTACCAGGAGTTTG CCATAGGGATGTGAAGCCTCAAAATCTTTTGGTATGTTATTCATTTGTTACTTTTCCTCTATGATTTGCACTCTTTTATT CTAAACCTATCACATGTTTGTTCTGTAGGTTGATCCTCTCACTCACCAAGTTAAGCTTTGTGATTTTGGGAGTGCAAAAG TTCTGGTATGTTGGTCTGCATTCTTCTTGTGCTTATCATTACTTCGTAAATGCATGATACGATGCTGTTAGTGGAATAGT GAAGTCTTGTGCTACCTATAGGTAGGTAGCATATGACTTAAGCATGTTTGATTTGTCCAAAATTGCAATTTTAATTGTGT ATGTGATGAATGACATTTCAGTTAATAGTCGTTAAAATATATATGTTGCGATTAATATGTACCCCCCCTGATTTCTTTTT CGGCTTAAAAATATTTTTGGTAGGCCTCACATTTATCAAAATAGTGTGTTTTTAGTCCTTCACATCTATGCTTTAAAGTT TTAGTGCTAAAAGCACATGGTTTTTGTATTTTAAAGGACTTAAAATGGAAACTTAAAATATAGAGGACTAATTTCAAAAC ATGTCGCATTTTTAGGGAGAAAAAAGATATTGGTTGGAATCAATGCTAATTTTGGTTACAATTATTTGGTTTAAAAAGAT AAAGTATTAAAGTGTAATTGTTATGATTTTATCTCAGGTCAAAGGTGAATCAAACATTTCGTACATATGTTCACGGTACT ATCGAGCGCCGGAACTAATATTTGGTGCGACAGAATACACAACTTCTATTGATATTTGGTCTGCTGGTTGTGTCCTAGCA GAACTACTTCTAGGCCAGGTTAATTTTTTTTTTGGGTAACTTATGCACTAATGTTGCACGTACAAAATAAATGTTTTCCC TTTGTTTTTGAGATATGTTATCTTGATTTCTCATAGTTTGAAATGTTTCTTTAGCCATTGTTCCCCGGTGAAAATCAGGT GGACCAACTTGTGGAAATTATTAAGGTGATCCTCATTTATTCTCAGATGTCACCCTAGATTGCTTGAATATAAGTACAAA GAGATAATAATTTGGGTGTCTTTTTATAGGTTCTTGGTACTCCAACTCGAGAAGAAATTCGTTGCATGAACCCTAATTAT ACAGATTTTAGATTCCCCCAGATTAAAGCTCATCCTTGGCATAAGGTAATTGCATTCCCTGCCATTCCTCCTTTTGCTTT GTAACAATGGTTTTTCTGGTTGATTGATGCCATGATTCCTGGTTCAGGTTTTTCACAAGCGAATGCCTCCTGAAGCAATT GACCTCGCATCAAGGCTGCTCCAATATTCACCAAGTCTTCGTTGCAGTGCAGTAAGTTGGGCAAACCCTTATACCTTCTC CACCTCCCTCCTTGGTGAAGGCACAAATAGAGAAATAGCATAGCAGTAATATGTTAAACAAACCTTGATATAAAATATAT TTACATACATAGTAGTCAATCCCGGATCGCGGCGCGTAGCGGCCGACCCCAAAAGTGGGATAGCGGGATAGCGGATAGCG GGATGACCGCTATTTTGATTTTTCACATATAATATTATATAACTAATATATACATATAATTACTAAAAGAAAGGAAAAAA AAATAGAGGAAAAGAAGAAAAAAACAGAGCAACTCAGAACAGAATAAAGGCCCAAGGGTAAACAGGGGTGGTGGTCGCCG GAGCCTGGACGGTGCTTGTCAGATTGCGCCGCGGCCATGGGTTCTGGACTTCTGGTCGAAGGTGGCTGAGGGGAAGCAAG TCGCGCCGGAGAAACGCGTTGAAGAAGGTTGCAAGTTGCAGAGGAAACGCGTAAAGAAAGAAGAAACGCGTGAAGAAGAC GAGTGAAACGGTGCGTTTCACTTATTAAGAGCGAAATTCCAAAAGTACCCTCAAATTTTAACCTAATTTACAATTTTGAG GGCAATTTGGGGATTTTCCTTGAACCCAACCCATCTTCAACCTGGAGCACCGCGATTGAACGCGATCGAACGCGATTTGG ACGCGATTTGGACGCGATTTGGCCGCAATTCGCGGCGCGACAGCCGCGACGGCGTTCCGCGACGCGATCGATTCAAAATC GCGGGGAAGGGCCGCGACGCGACGGCGCTATCGCGCCGCTATTTGCCGCGATCGATAACTATGTTTACATAATTACATAA ACATAAGAAGTTCCCTTGTTTCTTATATTGTTGCTCTGAGATTTGATCCACATGCCTTGGTATGTCATGTTTTAGTATGG TGGTTGATTTCTGCGATAAAGTATTTTTACCAATGAGATTCCATTATAATCACTGTTTATATTTTATTTGAAAATATTAG TATACATAGCATAGTTTTCACTAGTGGATTTTATATTTCAGCTGGAAGCATGTGCACATCCTTTCTTTGATGAGCTTCGT GAGCCCAATGCCCGGTTACCTAATGGCCGTCCATTGCCGCCACTTTTCAACTTCAGACAGGAAGTATGTATCTAGTTGCC AAATTGGTTTCTTCTATTAACTAGTCATAGCTTCTTTTTACTGTAACCTATGTGCGCACCAGGCTTACATGGCAATTTTT GTTGAAGCGCAATTCCGATAGAGTCTGGGTTGAAATGTTGGTAAAGGAATCAATGGTTCTAATTAAAATTATGTCTGCAG TTAGGTGGAGCATCCCCTGAACTGATCATTAAACTCATACCTGAGCATGTGAGGCGGCAAACTGGTCTTAGCTTCCCATA TCCGGCTAGCACATAA
CDS sequence (LotjaGi3g1v0239700.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGCTTCTGTCGGTGAGGGTAATGACGCAGTTACCGGTCACATAATCTCAACCACAATCGGAGGCAAAAATGGTGA ACCTAAACGGACCATCAGTTACATGGCTGAACGTGTTGTTGGCACTGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCT TGGAGACTGGGGAAGCAGTGGCCATAAAGAAGGTTTTGCAGGACAAGAGGTACAAAAATCGTGAATTGCAGTTAATGCGG GTGATGGATCATCCAAATGTGATTTCCCTGAAGCACTGTTTCTTCTCTACGACAAGCAGAGATGAACTTTTTCTGAACTT GGTAATGGAATATGTCCCTGAGACATTGTACCGAGTTCTAAAGCACTACAATAATATCAATCAGAGAATGCCCCTAATCT ATGTGAAATTGTATACATATCAAATCTTTAGAGGACTAGCATATATCCATACTGTACCAGGAGTTTGCCATAGGGATGTG AAGCCTCAAAATCTTTTGGTTGATCCTCTCACTCACCAAGTTAAGCTTTGTGATTTTGGGAGTGCAAAATTAATAGTCGT TAAAATATATATGTTGCGATTAGTCAAAGGTGAATCAAACATTTCGTACATATGTTCACGGTACTATCGAGCGCCGGAAC TAATATTTGGTGCGACAGAATACACAACTTCTATTGATATTTGGTCTGCTGGTTGTGTCCTAGCAGAACTACTTCTAGGC CAGCCATTGTTCCCCGGTGAAAATCAGGTGGACCAACTTGTGGAAATTATTAAGGTTCTTGGTACTCCAACTCGAGAAGA AATTCGTTGCATGAACCCTAATTATACAGATTTTAGATTCCCCCAGATTAAAGCTCATCCTTGGCATAAGGTTTTTCACA AGCGAATGCCTCCTGAAGCAATTGACCTCGCATCAAGGCTGCTCCAATATTCACCAAGTCTTCGTTGCAGTGCACTGGAA GCATGTGCACATCCTTTCTTTGATGAGCTTCGTGAGCCCAATGCCCGGTTACCTAATGGCCGTCCATTGCCGCCACTTTT CAACTTCAGACAGGAATTAGGTGGAGCATCCCCTGAACTGATCATTAAACTCATACCTGAGCATGTGAGGCGGCAAACTG GTCTTAGCTTCCCATATCCGGCTAGCACATAA
Protein sequence (LotjaGi3g1v0239700.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSASVGEGNDAVTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDKRYKNRELQLMR VMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETLYRVLKHYNNINQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDV KPQNLLVDPLTHQVKLCDFGSAKLIVVKIYMLRLVKGESNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLG QPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCSALE ACAHPFFDELREPNARLPNGRPLPPLFNFRQELGGASPELIIKLIPEHVRRQTGLSFPYPAST
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 2 | 383 | 382 | 4.4E-246 | – | |
PANTHER | 2 | 383 | 382 | 4.4E-246 | – | |
Gene3D | 19 | 113 | 95 | 6.4E-33 | – | |
CDD | 29 | 330 | 302 | 0.0 | ||
SUPERFAMILY | 33 | 351 | 319 | 7.46E-87 | ||
Pfam | 34 | 327 | 294 | 7.5E-61 | ||
ProSiteProfiles | 34 | 327 | 294 | 43.905 | ||
SMART | 34 | 327 | 294 | 2.8E-86 | ||
ProSitePatterns | 40 | 64 | 25 | - | ||
Gene3D | 114 | 370 | 257 | 1.7E-76 | – | |
ProSitePatterns | 155 | 167 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0239700.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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