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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0308000 |
| Transcript ID | LotjaGi3g1v0308000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Germin-like protein; TAIR: AT5G61750.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q9FLT3|GL34_ARATH Germin-like protein subfamily 3 member 4; TrEMBL-Plants: tr|I3SLD9|I3SLD9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0308000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:65274576..65280951) extracted from Lotus japonicus Gifu genome v1.2.
CTCATCATTACTTGCATTTCTTTCAACCCAATAAGACTCATGTTAGCTATAAGAGTCAATAACATCAACAACTTAATTGT GTGAACACACATATATTTATATATATGCATAAATTGAAGAGGATAATTTATTCAACCATCCCAATAAGGTGCAAGAAATA GAGGAGATTCAAAGATGAAATCCCTATCTTACTACTTTTTCTGTATGTTCTTCTTTATTGTCTACACCAACAACATCAAA GTTTCTTTGGCAGACTGTGATAATCTGCAGGACACTTGTCCAGCAATTCCACCCAACAAGCAAACCCTATTCATCAATGG CCTACCCTGCAAAAACCCAGGTAATCAGGGACAGAAGATGTAGAAAAAGAAGAAAAGGGGGTGAAAATTTAACACATTAA GCAAAATCAACAATGACTAACTGAACAAGATAATAAAAAAAATTAGGGGGGCGAATATATTATTTGAATGCTATTCTATT AAGGAAATTTTTTCTCTTGGGGGGCAACCGCCCCATTTGCTAACAACTGGTTTCGTCCGTGCAGGCAATGTAACATCTCA GGATTTCAGGACCATGGAATTAAGCAAACCTGGTTCCACTGACATTTTAGGTGCGTCCATAAAACTTGTCACTGCTGCTG AGTTTCCTGGGTTGAACACTCTTGGCCTCTCAATTGGAAGAACAGACATTGATAGGGATGGCCTAGTGAACTTCCATTAC CATCCTAGAGCTACTGAGATGATCTTTGTTACCAAAGGTGTGTTACTGGCTGGATTTGTTGACACCAAAAATCAGATTTT CCAGAAGTTTCTGCAAGTGGGTGATGTTTGTGTTTTCCCCAAGGGTTTGTTCCATTACATTCTGAATCAGGGTTTTGTGG ATGCCACTGTTTTCTCAGTGTATAACAGCCAAAATCCTGGGATTGTTTCCCTTACTCCTACTACTTTTGACACAACATTG GAATCATTGGAGAAGCTAAAGAAGAGGATCATTTCACTTTCTGCTTCTGATGTCCATGATGTTACCAGTTTCAACTCTAT GGAATTGGAAAGCATCTACAGTTAGCTGCTTCCAATATATTGTCTCTTGACTTACTAAATATAAATTCAAGTTCTTGTCA ACCCGGATAGTGAATAAATGAAAAGTAGTTTTGGATTTTATTTGGTTGACTATTGCTTAACTATACAAGTAGCAAGCCCA ATCTGGTACTCCTCTAATTCTCTTTGCTTTTATGGAACTTCAATGGAAGCTTGCTGTTTTTGTTACCGTATTATGGGTGA TACCGGGTGAAACTTTACCTAGTGAACTATTGCAAAGTTATATTTTGTACCTTGGTTTGATGCTCGAATGAAGAATAAAC TGGTCATATTAGAAAGTAAGTCATATTTGAATTGTGAAATAATTCAGCACTTTCTTACAGCATAAGGAATAGCATTCTTA CTCGCATTTGTGATGTATGTACACTGAAACTTCAATTAGAATGTTTATTAGTTATCTCTGGGTCTATATGCTTTTGTTTT TGAAGTGGTCAGTTGTTTCTTACCACAGAAGTTGTTTGGAGTGGAATAAAACCGTTTAAGTTATTTCCAAAATAAAAGTC TTATTTGATAATTTGTTGATGAACTTAGCTAGTAAAAGTTTTGAGTTTTATTATTTCTAAGTTATATCACTTCGATATAT TAAAACTTGAATCTGCTTGTGAGCAACGAACAAAACTTAAAGAAACACGTTTCTATAATTCAAATGGGACTAAATAACAT AAACATTTGCCTGCTTACAGTTTCGAACTTAAATTGATGACAAAAACTTAAAACACTAGATGCTACTCTTTTGATCAGTC AAGATATGGCTAATTGGGAAATGAAACTCAATTGATGAAGCAGTAGCACAAACCCGATGCATCAATGCATCTTTTAACTT TCTCAAATACAGGGGCCAACTGTAGGGCTTGAAGGATCAAATTATGAAATGTCTATAAAAATTCAGTGTTAAACTGGAAT AATTTTGGCATAGTTTTTTTTCTTCAATGTACACGTATCCTCCACGGGAGGCAATCATGTGAGCTGGGAACATCCACATT CTAGCTTTTGAACCAGTTCTCCAAACAAGTATTTTTTCATACAGAAGACTCGAACTCGATACCATATTTAAAGGGAATCA AATATGTACATCACTTGAACCAACCAGATTTTGGAATATCAAATGCAATAAAAAGAGAACTTTAAATATTAAAATCTATC CCAAAACCAAAACCATCCAAGTGTAAGGTTTTCAAAATATATACTTCTAGATCAGTCTCAATTGCAGTATATACCTTACA CCTTATTTCAAGTCAAGTAATATGCCAAAAGTTTCTATATGTACATGCAAATTAAAGAACAAGAACATCAAATAAATAAA AAAAGTATCCATGGAATAATCTATCCTCCACAGAGAACCAAGTACTTGAAAGGACTTCAAGTTGTAAAGATGAAGAGGCT ACAATATAAAAAATTAACTATGCTAGCATATGACTTTATGGAAGTGAGAGAGAAAACTAAGAAAGGCTAAGGGAATGTGT CCAAATTTCAAGAAAAACTGACCACCCCTCCATCTCAAGTGATCACGTAAAGGTATTGCCATGTATGAGAGCTGAACAAA ACATACGCACCAGGATTGTTTTTGTTTCCTTGATGCTATCTCCAAATGCCAACCATGCTAGTAACAACAGCAATAACTAT TCTCTTTACCTACATAATTTTTTTTAAATGAAATGCAGTTTGCATTGATCAGAATAATCCCGGATCAAACTTCGAAACTG CCAACCAAATTGGTCATCTTAATCGTGACAATCTTTTCCGTTTCCTATTCTTCTTACGCACAACAACACTTTTCGTGTTA CTGCTACCCGGGGGAAGAGCCAAAGTTGAAGCTCTTTTACCAATGTAAGTTCTGCCTTTCTTGGAAACCCATTTCAGAGG CATTTTGTTAACCACAGAACCAATATCACTAGAATTATTCAGTTCAACAAGTTTTTGGATTTGGTCTAGCATCTGGTGGG TCCATGCCACCGACAGATCCAATGCAAATGAATCATCCACTGGTTTTCTCCACAGATCCGTCAAAACCTCTTCAAATGAC TGAAAAGACATTGATGGTTGAGAACCTTGAAGATTTTCACAAATCATCTTCACTTTGATGACGTGCTTGCAAAGGTTACC TTGCATTGACCAAGAACAATCACAGAATGCAAATTCAGATCCCGGATTCCACACTAAATGTGTTAAGCTGCTGTCTTTCT GGCTCACAACTTTGGCAAAGAGATGGTCTTTATCATCCAAGGTAACGGCAGAGTTGGGAATTTGAAGTGCTCGATGCCAA GATGTCGATGAAATGTATTCCTCCTTCACCTTCTGGAATGAATCACTTTCATCAGCATAGCGGTCAAGCCAGTAGCTAGA ATGCAACTCAGTTGTTAACTTGTGGACTAACCAATCTACTCTTTGCAGCGCTCCAAGATGTGAATCATCAAAAAGTTTGG CTTTCAGTTTAACATGGTAGGCTTCCAATGCTCCAGAAGCTTCCTGGCTTGCTAGTGGAAAATTTCTCATCGTTGAAAGC CACATTTCTGCACAACAGGGGAAAGGAAGGATAAGGAGAAAGGAAATCAATATATCAATGACTAACTGATAATAAGAAAA ATCTTAAAATAATTTCAGCTGCAACTGCGTTTCAAGCATGCATGCAATTATGCCTTCATCCAAACAATTTTTTTCTGTGC ATGCAAAAAAAGCAGAGAAGCAAGATCTAACCAATCTTGGGCACCCAAGAGGCTCTGAAATATTCAATGAAAGCAGTTTG ATCAACAAAATCCAGCAAAAATTGTTCCAAGGCAAGCGATGTATTACTGCCCTCCCAAATGCTGTACACAATTTTACCAA GACACTTAAAAATCTCCCGCTGAACCTCCACATTACTGCATTTCCTGACAATATTCCTCAGCCATGATCTACGAACACGC CATAGCGAAAATAGGACAGGACAGCAGAATATATCTCTGTAAAAGAAATAAATAGAATTAAGAAAATTAAACACATAAGA ACTTTAAACCAAACTCATTTCTGAAGCAATGATGAATCTTGCCTCAAAAGATCAATTTCAGCCGCAGCATCATCAATTAC AAATCCACTGACTTTCCACCCAGGCTCAACACTACGAGCTCGATCAAGTAAAGCTTTCAGCCACTTAGACACATCAGGCT TTGCAAAGCTACGTGTAATGACCCAAGCAACAGGAAGTGCATGTTGTCTTGAGTCAAAAACAACTAGTGTGAACAAGGGA TACTGCCCATATAAAAAGATAATCAAGTTAAGTCAATTTAAGATATACTGTAACATGAATGAGATAACTGTCTTTCTTTT AGATCTAGAATAACTTAAGTCATGATTGAAACATAATTACTTTAAGTCTCTTGACACCAAAAGTTGAGTCTGCTGCAACA ACATTGCGATGACCAAAACGAATCATTTGCTGTAGCTGCCATTCTGTTTGGATCCCCAAGATGAATGGGTCTGAATCTGA AGCATCCTGATGAAAAAATACAGATTTTCTATTGCGTTCAACCCACATGCGGATGCTAGCTTGATCATCGAGATCCAGCT CATGCGTAGACCTTTTGACAATCATCCCTAGCTTGTGGACATACTGAGAAGCAAGGCTGTTGACTTTTGCATTTGAACCA CAATATCGCTCAATTCCTTCAATGTGTTTCTCCAAGATATTCTCTTCTGGAATGCCCAGATAAATCATGGACATTGTTTG CTGCTGAATTTCATTGCATATGTATGGAACTTTTTTGGCACCTGGACCAATGGCATCTCTATCAAGTGGTCCATGGCAGA CAAAACCGGACTTATTAACGTGACGCCTATCATTGTATATGATAAGCGCAAGTGACGGACGGGCATAAAGCCGTTTGACA GCAAAATGACAGGTACAACCCCGCATTGATTGAGGTCTAGCAGCTCGATTTCGGGTATTAAGTCGATATCTTCGACTAGG TAATATACCTCCACCCTCCCCATAATTTTCTGGGCCAAATGAGCACCAGTACCTTCACAGAGAACGTTTAACTTGACAAG ATCAGTATTGGAATCCTGACCGTGCAATAAACATTGAAGTGTATGTTTGAGAAAACATTAGAATGACGTTATCACTGGTG ATTTCCAAAAAAAAAACTTAACTAGAAAAAACACGAATGGAGGAATAATGCTTAAATTAAAAGGACTTTCACATTTTGGA AAACGCCAATACAAACACTACCTAAGTTTCTAATTGCTGATTTCCTAGTCTACTGTTGATACCAAATTTTCCAGACAATA ACGGGAAAATGGATTGAACTTGTGAACATGTTTAACATCAGGGAACTTGAACAGGACCAATTTTTCTATAAGAGAAGTAT TATTTGATTTCACACTTCCAAGATCCAATGCTCTACCAATAAACCAAAGAAAACAAGCAATAAATGCTAGAAAAAGTAAA CAATTTTCAAGTCACAATTCACAATAACCACAAGAGCAAAGAACAGTCTAAAGGGCAAGAAAAAGTTTGCTCCTAATCAT ATTGAATGAAGTGCAACAAGAATGGCAGAAACTTACAGCCTATACTCCAGATATTCATCATCCTTGTACTCCTTCAAGCT GCCAAGGGTTCGTTTCCTCCCTCTCTCGATATGGAACCGAGTCGGGCACTCCACATTACAGCACTCACCGATTATAAAAG CGTCAACCCGATCATAAGGAATAAGGGCAACTTCATCATGGTGGTCAGCATTGCCAAACTTGGTCCAAGCCAAGTCAGCA GCAGAGAACTCCTCCTCACTCGGGTCTTGCAACGGAATCTTCCCTACTGATTCAACTATATCCATATCCAAACAAACAAA CAAAAAACCAATGTTCCCTTCCTATGTACCAAAGAATCGCTCAAGCATTGAACAGAACAACAACACCCTGAAACAACATC ATCCAGAAACGACCCATTTGAGATAACTAATCAAAGACTTGATTTTGATAATTTTTTGTGAGTTATGAGCAACAACAGAT AACCAATTCAATCCAACGAAAGTAAAAAAATAAATAAAAATCTGAAGACAAGTTCAGTGCTGAGAAATGAAGCATACGTA CGTACCCTTTCAGTTCGACGGCTTTGCGGTGCTCCGGCGGTTATGGTGGCGGTGCGGCGGAGCTTGAAGTCACGGCCATG AATTGGGATGACGGAACGCTGCAACCTGCAATGAAACAACACTTTGGAACCTGAAACGACACTTTGAATGCTGTCGTTTC AGTGATACCCGAACTATCGAGGTTTAATTCATTTGAGTTAGGGCAAAAGTACCACC
CDS sequence (LotjaGi3g1v0308000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAATCCCTATCTTACTACTTTTTCTGTATGTTCTTCTTTATTGTCTACACCAACAACATCAAAGTTTCTTTGGCAGA CTGTGATAATCTGCAGGACACTTGTCCAGCAATTCCACCCAACAAGCAAACCCTATTCATCAATGGCCTACCCTGCAAAA ACCCAGGCAATGTAACATCTCAGGATTTCAGGACCATGGAATTAAGCAAACCTGGTTCCACTGACATTTTAGGTGCGTCC ATAAAACTTGTCACTGCTGCTGAGTTTCCTGGGTTGAACACTCTTGGCCTCTCAATTGGAAGAACAGACATTGATAGGGA TGGCCTAGTGAACTTCCATTACCATCCTAGAGCTACTGAGATGATCTTTGTTACCAAAGGTGTGTTACTGGCTGGATTTG TTGACACCAAAAATCAGATTTTCCAGAAGTTTCTGCAAGTGGGTGATGTTTGTGTTTTCCCCAAGGGTTTGTTCCATTAC ATTCTGAATCAGGGTTTTGTGGATGCCACTGTTTTCTCAGTGTATAACAGCCAAAATCCTGGGATTGTTTCCCTTACTCC TACTACTTTTGACACAACATTGGAATCATTGGAGAAGCTAAAGAAGAGGATCATTTCACTTTCTGCTTCTGATGTCCATG ATGTTACCAGTTTCAACTCTATGGAATTGGAAAGCATCTACAGTTAG
Protein sequence (LotjaGi3g1v0308000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKSLSYYFFCMFFFIVYTNNIKVSLADCDNLQDTCPAIPPNKQTLFINGLPCKNPGNVTSQDFRTMELSKPGSTDILGAS IKLVTAAEFPGLNTLGLSIGRTDIDRDGLVNFHYHPRATEMIFVTKGVLLAGFVDTKNQIFQKFLQVGDVCVFPKGLFHY ILNQGFVDATVFSVYNSQNPGIVSLTPTTFDTTLESLEKLKKRIISLSASDVHDVTSFNSMELESIYS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 7 | 7 | - | – | |
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| Phobius | 8 | 18 | 11 | - | – | |
| PANTHER | 12 | 211 | 200 | 2.0E-90 | – | |
| PANTHER | 12 | 211 | 200 | 2.0E-90 | – | |
| Phobius | 19 | 26 | 8 | - | – | |
| Gene3D | 26 | 220 | 195 | 2.4E-53 | ||
| Phobius | 27 | 228 | 202 | - | – | |
| SUPERFAMILY | 43 | 202 | 160 | 3.96E-29 | ||
| SMART | 66 | 201 | 136 | 4.6E-16 | ||
| Pfam | 71 | 201 | 131 | 2.1E-29 | ||
| ProSitePatterns | 108 | 121 | 14 | - | ||
| PRINTS | 113 | 133 | 21 | 5.1E-20 | ||
| PRINTS | 143 | 163 | 21 | 5.1E-20 | ||
| PRINTS | 176 | 191 | 16 | 5.1E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Manganese ion binding | Interacting selectively and non-covalently with manganese (Mn) ions. | ||
| Molecular function | Nutrient reservoir activity | Functions in the storage of nutritious substrates. |
Expression pattern of LotjaGi3g1v0308000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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