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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0345500 |
| Transcript ID | LotjaGi3g1v0345500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | KH domain-containing protein family; TAIR: AT5G64390.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|F4KDN0|HEN4_ARATH KH domain-containing protein HEN4; TrEMBL-Plants: tr|V7B896|V7B896_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0345500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:72315340..72324758) extracted from Lotus japonicus Gifu genome v1.2.
AATTGGTGTTAGCCCTTCCAAACAGAAATACAAACATGACCTAAAGCCTATAACTAAGTAACTAACTGTAACCAACTGAC AGAGGCACGTGTACAGTAAGTGAAAGTAACCACAAAAGGGTGTGAATCTAGAAGCATTGTTGCAGTGGAAGTGTGGTTTC TTTCACGTGATGTCCTCCAACAACAACAACAAGCGCCGCCATGTCCCCCCGGCACCACCGGAAACTGTTTTCCGAATTTT ATGTCCGGCCGCCGCAAAGACCGCCGACTTACTGGGCCTCGCCGGCGATGGAGTTAACATTCACGTTGACGACTTCGGCG GCGGCGACGATCGCCTCGTTACTATTGTCGGCGCCGCCGAACATCCCGCTTCTTGCGGCGGCGATGAGTCGCCGGCGCGG CTTGCCTTAATTAGGGTTTTTGAGAGAATGGTGGAGGAGGAGAGCACGACTTCGAATTCCGCGGTGGCGTGTACTTTGGT GGCGCCCAGCTATCAGGTTGGAAGTATACTCGGGAGAGGTGGCAAGTTTGCTGAGAAGATCAGGCAAGAGAGTGGAGCTC AGGTTAGGGTTTTGCCCAAGGACCAACCTCCTCTTCCTTCTCCTGGTGATGAGTTCATTCAGGTATTCTTTTCATATGAT ATTGCATTACCAATGCCACTTATTGCATCAAGATTGTCAATTATTTTGGATTAAGAGAGTTCTGCAGTGTTTGTAAATTG TAATCTATCATTTTGTTTCTTTGATTTTATAGAAGTAATCAAATTAGAGGTTGTTTTGTAGAATTAAATTTTGTTTACCT TACCTTATGCAATGGCTGCAAATTTGTGGCTGTATTTTAGTAATTTGTAGTGCTAATAGTGGTTTTCTTACTTGAGCTCT GACTCATTGAGGGAGGTTTATGATATATGCAGATAACGGGAAACTTTAATGTTGTAAAGAAAGCGCTTCTTTCTGTTTCG AGCTGTCTCCTGGATCATGCGAGGATGGATGCTGAGAATTCTGGTGCTTTTGTACCGTCTGGGCCTGGGATAGGTCATGG AATGGCACCTCCTGCTCAGGGTGAACCTTATCCTCAACGGGGTTACGCGCCAGGCCCTTATGGTCCTGATCATCATCCCA GAGGGTATTCTCCTTTTCCGGGTCCTGAGAGCGCTGGACCTTCTCATAGAATGTTTGTCGAAGAGGAGGTTGTCTTTAAG CTATTGTGTCAGCAAGATAAAGTTGGTAGTCTTATTGGGAAAGGTGGTTCGGGGGTGCGGGCTCTGCAAAATGAAACTGG TGCATCTATACAAATTGTGGAGGCTGGACCTGATTCGGATGAGCGAGTGATTGTGATATCTACGCGAGAGGCATGATAAC TACTTAACTCTGTCTTGCATAAATTATACTCTACTTGCACCTTAGTTATAGTTACCCATAGGATAGTTTTGTACATGAAA TGGTCAATAACCTTGCAATATGTTGTGTTTAAAATTCTTCTGTAACTTTGCTTTGGTCGGAGTAAATTATGTCAGCTCTT CGATGTTAGGTCTCAAATGTTTGTGGTTGGTTGCTTTGGATGCTTGTTCAGATTATTGTGAGCTGGCTCTCTGGTCTCAA GTTATTATGGGGATATTTGTTAGAAATCTAAAATATGATTGTTCTTTTGTTATAATCGAACAGGTAACAAATGTGTGATT TTTGTGGCTGGGGGTCCAGCTTCAGATTGTTTACTATGTGAGTTGCTGTTGAGTTATTCTAATAATGGTAACTTTCCTGT ATTGATAGTTTTCGTTACAAACATGTTGGCATCCTTTAGGAAAATGAAGAGGGAATTTATTAAATCTGACATACAATGTC TATGATATTTGTGAAGGAAACAACACTGAAATTGATATAACATTCTGCAGAATTCTGACCAGAAGCATTCTCCTGCCCAA GAAGCTCTTTTTCGCGTTCATTGTCGACTTACAGAGATTGGATTTGAACAAAGTAATGCAGTTACTGCTAGGCTCCTTGT GCGTTCACCACAGGTAGGCTTCCTCTTGGGCAAAGGAGGTCATGTTATCTCTGAAATGCGAAGAGCCACAGGTGCTAGTA TTCGTATCTTTTCAAAGGAACAGATTAAATACATTCCTCAAAATGAAGAAGTTGTACAGGTATTTGGCGCTTTTAGACAC GCATGTGAATTATATTCAATAGTTTGATGCCATGTAAGTTCAATCAAAATGAAAAAAATAAGAACATTAAAAATAATATA TCAGGAAATGACATATAACTCTCATCTCCCAGAATTTTGTATGCTTTTCTTTTTGACACTGATTTGTGTTTTGCTGACCA ACTTTCTATCACAGGTTACTGGGACCTTACAATCCGTACGAGATGCCTTGTTTCATATAACCAGCAAAATTCGAGAAATC ATTTTCCCACTGAAGACCCCTCCTCCAAATTTTGGTGTGCCGCCACATTTGCCACCATTTCCAGAGATGCCACCTCCTCC AAATTTTAGTGCACCGCCACATATGCCACCATTTCCAGAGATGCCACCTCCTCCGTCTAGGCCAAGAAATCACTTGATGT CCTCTGGCCACCCCCCTCCTCCAGTTGGGTTTCCTCATGGGATGGAGCATTCATCTGCTCCCCCAATGCCTGTTGATCAT CAGCATGCATATTTACATGGCATGAATCGTGGTCCACCTTCTCTAGCCCCACCACCCCCTCCAGCACCACCAAACATGGA TCGAGTTCCCTATCCTCGTGGTTATGAAGGACCAAATTCTCCTAGATCATGGAATCCTCTGGTCAGTTCCACTTTCTGGG TGTATTAATGCCTTGGGGATTTCATATATATCGGTCTAAAGTCTAAACCCTTTCTTTTTTGGTCCCCTCCACCCGTGTGC CAACCCTTTGTGCATTTTGGAACGATGTTATAAGATATAAGTATAACTCTTTAGGTTTGTATTTCAGGCAGTGCAAAGAG GAAATCCAGGAGGGACAGCTGATACTTCTAGTTTGTCTTCAAGAACTGGGACTCCTGGAAAGTGAGTACATGATTTTCTT GTATTTTCACACAATCTTATATTTTATCTTTGTCGATAGGCGCTTTCCTCGGTGTTGTGACTAATGTTGAATTTATAATG ATTTGTATGTTATTTCCAGCAATGGAAACCCCTTACAGAATGCTACTAGCTCGACCGTTGAGATCACCATCCCTCATATG TATTTAAGCCACGTGTATGGGGAGAACAATAGTAACTTAATTGACATTAGACAGGTTTGTTTATGTACATTTTTAGTGCA TGTTATGATACACAATGGTGAAGTCAAAAATCACAGTGGGCAGTCACAATAGCTAATTGAAGTTGTTACTATCCACCGTG ATTTTGGCCCAATGTGGTTTTCCACTGTGTATCCAAACAAGTAGTCAATCCCTTTGTCTACTAGAAATTGTCTTGGTGTT TTGACATTAGGGTTTTTCTCAGATATCTGGTGCAAACGTTGTGGTTCATGATCCAAAGGCTGGAGCCACCGAAGGTCTGG TCAGTGTATCTGGAGCACCTGATCAAATTAACGCTGCTCAATGCCTAATACAAGCTTTTATCTTATGTGGGCAGACTACA GCTTGAGACTGCAGGGACAAAGGTTTTCTATAAGCGGTTTTCAAGTTTATACCTTTAAGGTCTTGTAATTCTTGTACTAT CATGTTAGAGATGTTCATATCAAGGTTGAAATACTACTTTGTGAATTGTACGTTCAGCTGACATAAATTTATTCAGATTT TCCAGCGCCAAATGATAAGTTACCATGTTTTTATTGTTGATTCCAACTATTCAAGCCGTAAGTTACCCTCCTAACATAAA TGATAAAACTTGTATTGTTGAACAGTTTGGAAGGTTAAGAGAATCATTCCCACTAACTTCAAAAAAGTTGTCTTTGAACC CCTTCCCGATTTTAAGTAGTTTCATTAACTAAACAAACATAAAGACCAATTTTCTTAAAATACAATTCAACTGCTCAAAC TCAAAAAACCTCTGAGAGTTCATTAGAGCTGTTTGGAACCCAACATGAATCAAATTGTCCAAAAAGAACTAGCTGTGCAA TATTACATGGTTTTACTAATATATAAAACAGAAAGCTCATTCAAAAATTTACGCCAAAAATGCCGAACTAGCCCTTTATA TGACAAAAATATAAAGGTCTATGATGATGATTCATCAGCATCTCCTGGGACTCTAAGCACTATCTGGCTGGCCTCTGGGT TTTTGTTCTGAAAAAAGTGGAAAGCAAAATTAAGTTCACGAGGATGTAAATTTAAGTTGGAAAGAGATGGATAAAAACTC ATGAATTCATGGTTTTCCACCTCATTCTTGTTTAATGAAGAATTTGGTCCAGGCATGAGTGCTGCTGCCCTTGATAAGTC CCTCAGAGTTCCCTGTGGTCCAGAAAAATGGAAACTTAAAATAAACGAACTGAGACAAAATATGGGATAATTTTTTTACC AAATGATACCACGTGAAAGTACTTGACATAAAATAAAAGTGCAACATGCTGTGTATTATCCCTACTGCATTTAAATTGAT AATGAAACATGAAACATCTTTTCCAAGTCCAGATACCAGAATTAGTCATATATTTTAAAGAAACACAGTGGCTGTGTTGT AATTTTCTTTTAAATACAAATTAGATACCAGAATGATATGTTAACTCACTGAAGATCCAAATGATTAGAATTGATGTTTT ATGTTTTCCCTGAAACTAGATTAGGGCATGGTGTTGGAACTGGATCTGTGATGGTCTCTTCAAGTAACTTAAACCGATTG TCAAATCATTGATTCAGGTCCAACTTAAGATCAGATTATTTAAATTCAAGTCCGTGATTACTAATACATACTGATTTAAG GTATGTTGGACGTTAAAAAAAGCTTTGCAGCATTCCATTTAAAAAAGGACATAATCCCTAGAATTCAATGCTGCAGTTTC CTTGTAGGTTATTGAATTAATGTCTAGATGAAACATGCATTAAACACAATAGCATCTAATATTATTAGTGACCAGCGGAG CCCTGCATGATATAACATCTGCAAATTAACATTCATATCAAGATAGTATATGCACATAATTCAATGGATAATATTAAGAT GTCCATAATGTATTAGAAGGGACATAAACCACAACAAGGTACTTTTTCAGTTGTTTAGAGAAAAACATATACCATAACAG TTAATTTTATAGAACAACATAGAAAAGACAAACAGTAGAGGACATAAGGAATAAACATAGCTCCGATTTTACCTTATTTG CCCACATAAGTCCACAAGCATTGCAGAGGGTTCTTGGCCCTTCAGGCCCACGCCGCATCATTGGTGTGCACTTCTCACTG GTGCCACAGTGTCTACAACTGCCATGAATTGATAGAATACACAATTCATCAATTAAAATTTACAAGATGAATTCAGGATA GGCTCAAAAGTTTCCAAAGGGACTAGACTAAGGCTTTCATTTCAAGCCATGATAAAGTTAACCATAAAATCCAGAATACT TATTCATAGTTTTGTCTCTCTTGTTTCAGAATGAACCACTGAACTTACACAATATCTTGCTGTTGGGATCCATTATTGTC TCCCGTCCAGTTTTCATTTGTTCCCCAATTTGTTGCATTTGAAGTAGATTCATCATGGTTGGACTTGGTAGATGTAAACT GACCTTTATTTCTTTGCATCCTACAGAAGTCAACATGTATTTGTCAGCAAGTGGTGCAAATATAACAAAATAACAGACAA CAGCATATAAACTTGCCAGATCTCATACATTCACTATATTTATGCTATTACATAACTTTAAGAAGGCTAAAGCTAGAAGA TGGTAGATGCACATATTTCAGACGGAGTTAAGCTGGAACTTTACTGGAGTGTTGAGTATCCATGATGTCCCTAACAATTT TGCTGAGTTAAACCATGCCTGTGAAGGCTACATGATTTTGAAAGAATTTATACATGATTTCCCAAAGCTACAACGAGGTA TCTATAAAAGTAACAAAAATAACCTAAGAGGCTAATACAAGACTCTGCCATCATTTCGACAATAAGAGCTACACAAACAA CCTCTCTAATGATTTCATTCCTAATCCTATCTTGTTTTGCATGACCACCCAGCCATTGGAATATTCTCATCTTTGCAATA CTAGCCTAGCTTTTCATCATCCAATATTCAATCCCAAACAACATTGCAGGTCTTATAGCTGTGATAAAATTTTCCTTCAA GCTTATGCAGTACTTTTTGATTGCAAATTATACTCAAAGCAATCCTCCATTCACACTGCGTGGATCCTATGCTCAGCACC ATCTTTATCTCCGTTACTTTGTAAGATAGATCCAAGTCCAAGCCTCCAAGGTACTTAAAATGTGAGACTTTTGGTATTAT AAGCCATCCAATTTTCATTTTAAGCTTGAATTTGTGAACCTATGTTAAACTTGAGCCCTATAAACTCAGGACAAGCCATT TTCATTTGCAAAGATTAGGGACCAAATCGAAGGTTAACAATGGTGCAAATTTTCTTTTCCTAGGTATTATGCAGAGCAAA GAAAGAAGGGGGATCACTCATTACTTACATCAGAAGTGGGATCACTCATTTCAAACCTCACTACACCAGCAGGAAATTAG CAACTAGTTCAATGTCATACAATGTTAAGCAGCATTCTTGCCATAAGGATTTTTTAAGGAAGCCCGGACACCTACCAAAC ATCCCTGAAGGATGAAACATGACAAAGAAGGCTGTGAAAGTTTAGAGGAAACTCGGGGAAGAGAACAAGGAGATCTCTGA AAAGGGGAGTGGAGTAATTTTGTAGATCACAAGAAGCTTATTGGGCTCAATTGTATTCTCAAGAGCAGAAAATGGAGATA TATATGTTGGAATTCAGTAAGTGAAAATAGGTAATGGCAATGGACCTAAGGATTCCTCAAGATGGAGTCCAACTAGAGGA AATTGTCATGTTCCTTATGGTGTACTACCAGCCACTTTGAGGGAGGGTGATAAGAGAATCCTGAGAAATAGTTAACAATG GTTGGAAGGCAAGGCAGCTTTAAAAGGAAAATATATATGATTGCAGACCCTTCAAGGAACTTGCCACTACTTCCTCCTTT CCACCCTTTTACTGTTATCAACAACTCAAAACATTTACAAACATAAATTGAGTAGACTGTAGAGTGAAGTTATGATTTCC ACATAAACTAATATTCCATGATAGCTTAATCTAAGTTATAATGATAGTAAGCACAATACCTCAACGCTACTTCTTTACGA ACAGTATAACGGATTTTTTTTTCAAAATTTCGTTCCTTCCGCTTTTCACGAAATCTAATCAATGATGCTATTCTCTGAGG GACGCTGAATTTTGGTGGAGTACCAGAAAACCCCTGATAAAATACTCCATGAGCAAGATATTTTACTAGCATAATGCTAT AAGTCACACTCTAACCAAATAATGTAGTAATACCCGGTTATTCTGGTGAGGAGAAACTGGCATAGCAGGCCCAGTTGGAG GTATTTCACGGCCTCCCAGTAACAGCAGTACAGCTTGAACCTGAGAATGACACCCTAGGATTATCATAAATAATTTTCTT CAATGAATCAAATTCTAAGTAGGTCCGCAGCTTGATTAATAATGGAAAGAATTCCTTAATTATCTTATACCGAAGCAGTC TTTCAAATCATATTATAATACATGCCAAAAAGCATGTTAAACTGCATAGTATGATAAGCTTTCCAATATGAAAAGCATTG AAAATTGAGACAATACAAAATCGATACCTGTGCATATAAAGTATGGGGTTCCTGAGCTAGAAAAAAGTCAACATTTCTTG TTTGATCCAATTTAGCAACAATAATGACCAGTGCTAGAAGAAGGAAAAACCAAACATGCGTAGCTGTTATCCATGTGAAT TATAAAATTGTGCTTTTTGCTATAAAAGCGTAGCTGTCATCTGTTGGAGTTATTGCCGTGTAACTAGGAATTCACAGCTT TGAGTCCATAAAGTGCATTACAGCAATATTTGCTGAAGCAAGCATGTAAGGATCCATAAATGGTCATGAAGTGCACCACT TGACAATAATTTCAAAGATGGATTCTATTATTTATAACTCAAGCATTCCTGTGTTTAATGATTTCATGCATAGATTCTCT CTCACACGCAAACATTATGGAGTCATTAAACTGATATAATTGAAGTAATCTACAGGAAATTAATATTTTCAGCAAAGGCT TTTCAAACAGAAGATAATACCATGTCAATGCAAGAGTAAAAAGCTCAGATAAGTTGATGCACCTTATCTGGTGAAACCGA GTCAAAGACATAAACCTGGCCCTGAAAAGACAATGTAAGCTGATCCCCACCATCACTCGCTTGATCCACCATTACAGTGT GATTGTCATGGATATTTCCATGGTTGGAGGGAACTTCACCTTCCACACTCTCACCTCCACCACAGTTAGTATTGTCACCG TTATTCTGATCATCATCAATCCCATTCCCATTGCTCATATGGTGCAATTCATGATGCTCATGTTCTTGCACATATGGACC AAGCAAAGAATGTTGTTCATCACTGATGTGTGTCCGAGAATCACCCCCATTAATACTATCCATGGTACAGAGAGAGCCCA AAATACCTTTGGAAATGGCAGAAAAGATGATTAAAGGCAGCCAAAGAGAACTACTAGCAAAACCAACAGAGAAAAATAAA GAAGCTACTAAATATGGACTAAGCAAAGCATGACATTCTAGCAGCAAACCAACTATACATAAAATCAGGAAAGTGCATTG AGATAGCAAGAAAAGTATCAGAGTGAAGGATAGTGTATGATATGACATTCCAATTCCAATTAAAGTATGACAACAGACAA ACATCAACATTCATCAATGGCTGCAGGATGAAACAAGGAGAAAAACATAGCCAAAAAAGACAAGAAGATACTAGAAACAG CCAAAAAAAAAACATTTGAGGTGAATTTACAGACTTTGATGGATCCCTATTGTAAAGGAATGGTTTTGAATCACAAACAA TGATCAGAAAAACAAAACATCCAATACTAAACGATGTGAATCAAAGGAAACGACCCACAAAAGATTTCATTATGATATGA TGAAAAAGAATGCATTTTTAAGGAGAAGAACTCACGGGCAAGGTAATTGGAGGTTGTGGATTGATTTGCAGAACAACCCA GAAGCGCAAGGAGGCACAGGATTGGGTGACAGGAAGTGAGGAAGAAGATGAAGAGCAAGAGAGAGTAAAGGGGGGAAAAT GAAATGCGAGTGAAAATGGGTAAGGGTGGGTCGGTAATGAAAAGGGATGAGGAATGAGATCAGAGACAGACAGGGAGACA CACGACAGACAGAGCCTAGTTCCAAGTCAAAATCTTTTTCACAAACCAAAAAATATTTC
CDS sequence (LotjaGi3g1v0345500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCTCCAACAACAACAACAAGCGCCGCCATGTCCCCCCGGCACCACCGGAAACTGTTTTCCGAATTTTATGTCCGGC CGCCGCAAAGACCGCCGACTTACTGGGCCTCGCCGGCGATGGAGTTAACATTCACGTTGACGACTTCGGCGGCGGCGACG ATCGCCTCGTTACTATTGTCGGCGCCGCCGAACATCCCGCTTCTTGCGGCGGCGATGAGTCGCCGGCGCGGCTTGCCTTA ATTAGGGTTTTTGAGAGAATGGTGGAGGAGGAGAGCACGACTTCGAATTCCGCGGTGGCGTGTACTTTGGTGGCGCCCAG CTATCAGGTTGGAAGTATACTCGGGAGAGGTGGCAAGTTTGCTGAGAAGATCAGGCAAGAGAGTGGAGCTCAGGTTAGGG TTTTGCCCAAGGACCAACCTCCTCTTCCTTCTCCTGGTGATGAGTTCATTCAGATAACGGGAAACTTTAATGTTGTAAAG AAAGCGCTTCTTTCTGTTTCGAGCTGTCTCCTGGATCATGCGAGGATGGATGCTGAGAATTCTGGTGCTTTTGTACCGTC TGGGCCTGGGATAGGTCATGGAATGGCACCTCCTGCTCAGGGTGAACCTTATCCTCAACGGGGTTACGCGCCAGGCCCTT ATGGTCCTGATCATCATCCCAGAGGGTATTCTCCTTTTCCGGGTCCTGAGAGCGCTGGACCTTCTCATAGAATGTTTGTC GAAGAGGAGGTTGTCTTTAAGCTATTGTGTCAGCAAGATAAAGTTGGTAGTCTTATTGGGAAAGGTGGTTCGGGGGTGCG GGCTCTGCAAAATGAAACTGGTGCATCTATACAAATTGTGGAGGCTGGACCTGATTCGGATGAGCGAGTGATTGTGATAT CTACGCGAGAGAATTCTGACCAGAAGCATTCTCCTGCCCAAGAAGCTCTTTTTCGCGTTCATTGTCGACTTACAGAGATT GGATTTGAACAAAGTAATGCAGTTACTGCTAGGCTCCTTGTGCGTTCACCACAGGTAGGCTTCCTCTTGGGCAAAGGAGG TCATGTTATCTCTGAAATGCGAAGAGCCACAGGTGCTAGTATTCGTATCTTTTCAAAGGAACAGATTAAATACATTCCTC AAAATGAAGAAGTTGTACAGGTTACTGGGACCTTACAATCCGTACGAGATGCCTTGTTTCATATAACCAGCAAAATTCGA GAAATCATTTTCCCACTGAAGACCCCTCCTCCAAATTTTGGTGTGCCGCCACATTTGCCACCATTTCCAGAGATGCCACC TCCTCCAAATTTTAGTGCACCGCCACATATGCCACCATTTCCAGAGATGCCACCTCCTCCGTCTAGGCCAAGAAATCACT TGATGTCCTCTGGCCACCCCCCTCCTCCAGTTGGGTTTCCTCATGGGATGGAGCATTCATCTGCTCCCCCAATGCCTGTT GATCATCAGCATGCATATTTACATGGCATGAATCGTGGTCCACCTTCTCTAGCCCCACCACCCCCTCCAGCACCACCAAA CATGGATCGAGTTCCCTATCCTCGTGGTTATGAAGGACCAAATTCTCCTAGATCATGGAATCCTCTGGCAGTGCAAAGAG GAAATCCAGGAGGGACAGCTGATACTTCTAGTTTGTCTTCAAGAACTGGGACTCCTGGAAACAATGGAAACCCCTTACAG AATGCTACTAGCTCGACCGTTGAGATCACCATCCCTCATATGTATTTAAGCCACGTGTATGGGGAGAACAATAGTAACTT AATTGACATTAGACAGATATCTGGTGCAAACGTTGTGGTTCATGATCCAAAGGCTGGAGCCACCGAAGGTCTGGTCAGTG TATCTGGAGCACCTGATCAAATTAACGCTGCTCAATGCCTAATACAAGCTTTTATCTTATGTGGGCAGACTACAGCTTGA
Protein sequence (LotjaGi3g1v0345500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSNNNNKRRHVPPAPPETVFRILCPAAAKTADLLGLAGDGVNIHVDDFGGGDDRLVTIVGAAEHPASCGGDESPARLAL IRVFERMVEEESTTSNSAVACTLVAPSYQVGSILGRGGKFAEKIRQESGAQVRVLPKDQPPLPSPGDEFIQITGNFNVVK KALLSVSSCLLDHARMDAENSGAFVPSGPGIGHGMAPPAQGEPYPQRGYAPGPYGPDHHPRGYSPFPGPESAGPSHRMFV EEEVVFKLLCQQDKVGSLIGKGGSGVRALQNETGASIQIVEAGPDSDERVIVISTRENSDQKHSPAQEALFRVHCRLTEI GFEQSNAVTARLLVRSPQVGFLLGKGGHVISEMRRATGASIRIFSKEQIKYIPQNEEVVQVTGTLQSVRDALFHITSKIR EIIFPLKTPPPNFGVPPHLPPFPEMPPPPNFSAPPHMPPFPEMPPPPSRPRNHLMSSGHPPPPVGFPHGMEHSSAPPMPV DHQHAYLHGMNRGPPSLAPPPPPAPPNMDRVPYPRGYEGPNSPRSWNPLAVQRGNPGGTADTSSLSSRTGTPGNNGNPLQ NATSSTVEITIPHMYLSHVYGENNSNLIDIRQISGANVVVHDPKAGATEGLVSVSGAPDQINAAQCLIQAFILCGQTTA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 626 | 618 | 6.1E-152 | – | |
| PANTHER | 9 | 626 | 618 | 6.1E-152 | – | |
| Gene3D | 38 | 177 | 140 | 2.0E-16 | – | |
| SUPERFAMILY | 97 | 174 | 78 | 1.75E-12 | ||
| SMART | 97 | 171 | 75 | 1.8E-6 | ||
| ProSiteProfiles | 98 | 166 | 69 | 14.005 | – | |
| Pfam | 103 | 163 | 61 | 4.5E-10 | ||
| CDD | 103 | 167 | 65 | 1.44072E-14 | – | |
| Gene3D | 242 | 403 | 162 | 4.1E-35 | – | |
| SMART | 242 | 318 | 77 | 6.0E-9 | ||
| ProSiteProfiles | 243 | 310 | 68 | 14.173 | – | |
| SUPERFAMILY | 244 | 324 | 81 | 7.75E-13 | ||
| CDD | 245 | 314 | 70 | 4.17323E-16 | – | |
| Pfam | 247 | 294 | 48 | 1.4E-11 | ||
| SUPERFAMILY | 322 | 403 | 82 | 3.8E-15 | ||
| SMART | 326 | 400 | 75 | 3.2E-9 | ||
| ProSiteProfiles | 327 | 395 | 69 | 14.907 | – | |
| CDD | 329 | 396 | 68 | 1.0465E-17 | – | |
| Pfam | 330 | 396 | 67 | 9.2E-12 | ||
| MobiDBLite | 424 | 562 | 139 | - | – | |
| MobiDBLite | 424 | 467 | 44 | - | – | |
| MobiDBLite | 494 | 510 | 17 | - | – | |
| MobiDBLite | 536 | 562 | 27 | - | – | |
| Gene3D | 561 | 636 | 76 | 9.5E-14 | ||
| SMART | 563 | 633 | 71 | 0.0012 | ||
| SUPERFAMILY | 564 | 632 | 69 | 4.24E-11 | ||
| ProSiteProfiles | 564 | 628 | 65 | 13.062 | – | |
| Pfam | 566 | 629 | 64 | 4.6E-8 | ||
| CDD | 566 | 629 | 64 | 2.48216E-10 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
Expression pattern of LotjaGi3g1v0345500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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