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LotjaGi3g1v0370100.2

Overview

Field Value
Gene ID LotjaGi3g1v0370100
Transcript ID LotjaGi3g1v0370100.2
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT5G48380.1 BAK1-interacting receptor-like kinase 1; Swiss-Prot: sp|Q9ASS4|Y5838_ARATH Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380; TrEMBL-Plants: tr|A0A072TLE6|A0A072TLE6_MEDTR LRR receptor-like kinase; Found in the gene: LotjaGi3g1v0370100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:75736360..75739988) extracted from Lotus japonicus Gifu genome v1.2.

CTTTTTTCCAGAAAGACGAGTCGGAGTCAGCAACTGAACAAGCACTATCACTTTCGCAAGTCTTCGCGGTTCTGTAGTCA AGTCTTCTCTCAAGCTTGGAAATTTTTGGCTTACCTTGTTTGACCCGTTCCAATTTCCAAATTCTTTCTCATGTTCACAC CAGAAACAGTAAGCATATCTCAAAGGTAGCTTCTTTCTTCTCTCCTCCTCTCTGAAATTTTCAAACTTTATATTCATAGT CTTCATATTCTGCACCTTACTCAGTTCATGTTCTTTTTTTTTTGGCTTTCCTTCTCAGCAGTGCGAAGTTTCCTGTGAGC TTCATGCGTTTTCCTGCGTTGGGTTGTTCAAAAACCCAGGTGGGTATTTGAGCACTTCTTTAAAAACCATTGTTTTCAAT TCATATCTGAGTTAGCTTTATTGGGTTTCTCAAAGTTTTGATTTTTTTCTTTTCCTTCTTTCAAGAAGTCATACTTTGTT GGGGGGGTGAGAATTTTGGTCTAAAGTAAAGGATCTTTCTTTGCCTTTGTTTGTATCTCTTTGGATGGTTGACTTGGTTT GTGAGCTGAACTATGTTTATGCTGTTTTGTTTTTCTTTTCAGTGTTTCTCAGGGTTTGTTCTGAGGAGGATTATGGTGCT ATGGAGTTTATTATTATAGTTTGTGCTGTGCCTTGAATTGGATACCAATTTCAGTGAGGTGTCTGGATTACTTCTTCTTG GATTGTGTTAGAATCTTGGTGAAGATGGTTGTTCTAAGTAGCCGGATTTTCAGTTCTCATATTTTTGTTAACTTCATGCT GCTGATTAGTATCGGGACAACCTATGGGACTGAAACTGACATCTTGTGCTTGAGAAACATAAAAAATTCCCTTCAAGACC CCAATAATTATTTGCAATCATCTTGGAATTTCAACAACAATACTGAAGGGTTTATCTGTAGATTTAATGGGGTTGAATGT TGGCACCCTGATGAGAACAGGGTTTTGAACCTCAAACTGTCCAATATGGGACTCAAGGGCCAGTTTCCTCGTGGCATTGT AAATTGCTCAAGCTTAACAGGCTTAGATCTTTCGAATAATGGTCTTTCTGGAACCATTCCAGTAGATATAAACACTCTTG TACCATTTGTGACAGCTTTTGATCTATCTTCAAATGAATTGTCTGGGAATATACCTGTCAATCTTGCAAATTGTACCTAT CTTAATACCCTGAAACTCGACCAGAATCGACTCACAGGTCAAATTCCTGCACAATTGGGCCTTCTTCAACGACTCAAGAC ATTTTCAGTAGCTAAGAATCTTTTGACGGGACCAGTTCCGAACTTTCCCAGTGGCAAAGTTGACGTAAGCTATGGAAATA ATCAAGGCCTGTGTGGAGGTTCATTGGGGAGTTGCCAGGACAGTGGTTCCTCCAAGAGTAACACTGCAGTTATAGCTGGA GCAGCTGTTGGTGGGGTGACTCTTGCAGCATTAGGATTGGGTGTTGCAATGTTCTTCTACGTGCGCCGTGTTTCGTACAG GAAGAAGGAAGTGGACCCTGAAGGCAACAGATGGGCAAGAAGTCTAAAAGGAACTAAAGCAATTAAGGCAAGTTGTGCTG ATGACTTATACTGCGCGTATATGATTACTATTAGAGAGCTTTTCATTTTTCTTCTGAGATCCATTTGGTTTTTATACTTT TAGTAAAAACTAGTTTATTTGAAACATTTCCTTTTTTATACTTTCAACTAGAGGGCATGCCTTGGCGCAACAATAAGGTT GCTGCCTGGTGACTTTGCGGTCAGAAGTTCGAGCCGTGGAACCAGCCTCTTGCAAAAAATGCAAGGTACGGTTGGCTACA TTAGATTCACAAGGTGGATCCAGCCCCTCCCTAGACCTTGCTCATATTAGGAGCTTTATAGCATTAGGTTTGCCCTAATT TTGTATTTTCTTACTTTCAATTGAAGCATTTTCTTAATAACTATTATATTTGCTTGATATTGTTCTTTATAGTAATTGGG AGAACTTTTTGTGCATACTGCTACACCAAACACATTGAAGTAATATATTTTCTAAATGAAACTGAGATTGTATTCATTTT CAATGTCAAAGTTAGAAAATATAGAATATACTTGCTGCAAAGTTATTTTGTGTAAAACTTTCAGATCTGTTGTAGTTCAA ATGATTTTACATACTATTGAACTCTTGTGAGAATATTATGCATGAGCCTAACAATACTGAATTGGACATCAGGTTTCTAT GTTTGAGGGATCAATTTCAAAAATGAAATTGAGTGATCTCATGAAGGCTACTAACAGCTTCAGCAACAACAATATCATTG GGTCAGGAAGAACAGGAACTTTTTACAAAGCTTCTCTTGTTGATGGCCCAACACTCATGGTTAAGAGATTGCAGGAATCT CAGCACTCTGAGAAAGAATTTATGTCTGAGATGCAAACATTGGGGACTATCAAACATCGTAACCTGGTTCCTCTTTTAGG TTTTTGCATGGCCAAAAAGGAGAGGCTGTTGGTCTATAAAAACATGCCGAATGGCAACCTCCATGATCAACTACATCCCG CTGCTGGTGAGTGCACCCTTGATTGGCCTTTGAGACTGAAAATTGCAATTGGAGCAGCCAAAGGATTAGCGTGGCTTCAC CATAGCTGCAATCCCCGTATTATCCACCGAAACATAAGCACCAAGTGCATCTTGTTGGATGCAGATTTTGAGCCCAAAAT TTCTGATTTTGGCCTTGCCAGATTGATGAACCCAGTCGATACTCATTTGAGTACTTTTGTCAACGGTGAGTTTGGGGATT TAGGTTATGTTGCTCCCGAGTATGCAAAAACTCTGGTAGCGACACCTAAGGGGGATGTTTTTAGCTTTGGAACCATACTT CTTGAGTTGGTAACGGGTGAAAGACCTACAACTGTGTCTAAAGCTCCAGAAACTTTTAAAGGAAATCTCGTAGATTGGAT TACAGAGCTCTCAAGCAACTCACAACTCCATGATGCCATTGATGAATCACTAGTCGGCAAGGGTGTTGATAATGAGCTTT TCCAAGTTTTGAAGGTTTCATGCAACTGTGTTTTATCAATTCCAAAGGAGAGGCCCACCATGTTTGAAGTATATCAGCTT TTAAGAGCTATTGGGGGTGCATACAATTTCACAACTGAGGATGAGATATTGTTACCGGAAGATATTGGTGATACTGAAAA CATGGTGGAACTTATTGTTGCTCGAGAAGGAAATAACTGAAAAGGTATGCCTATAGGGTATCTGTAATCAGTTTTAATAT GTAATTATCTATATCTTACTTTGTTGTCTTAAAATAAATTAGTGTTATAAATAGTTTTGAGGATCTAGATCAAGTTGTGT GCTATTATCTTTAAATATAAATGTCAATATGAGATAATCATAGATTATATATAGTTGGGTTACTTCTTTCTAATCCTGGT TTTTTTATCTGATTTGCTTGTTCTCCTCTTGTATGCTTATGTGTGGTTGAAGCTCTTTTAGTAGTTTTCATGCCTCCTCC TGCAAGTTCCATTTGAGCTTGGGGCGCGTGCACAATCTACCTTGTGCTGGAACTAAACTACTATTTAGAAGAATGAAGAT GGTGATAATCGAATTCCTGACCGGTTTTG 

CDS sequence (LotjaGi3g1v0370100.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTTGTTCTAAGTAGCCGGATTTTCAGTTCTCATATTTTTGTTAACTTCATGCTGCTGATTAGTATCGGGACAACCTA TGGGACTGAAACTGACATCTTGTGCTTGAGAAACATAAAAAATTCCCTTCAAGACCCCAATAATTATTTGCAATCATCTT GGAATTTCAACAACAATACTGAAGGGTTTATCTGTAGATTTAATGGGGTTGAATGTTGGCACCCTGATGAGAACAGGGTT TTGAACCTCAAACTGTCCAATATGGGACTCAAGGGCCAGTTTCCTCGTGGCATTGTAAATTGCTCAAGCTTAACAGGCTT AGATCTTTCGAATAATGGTCTTTCTGGAACCATTCCAGTAGATATAAACACTCTTGTACCATTTGTGACAGCTTTTGATC TATCTTCAAATGAATTGTCTGGGAATATACCTGTCAATCTTGCAAATTGTACCTATCTTAATACCCTGAAACTCGACCAG AATCGACTCACAGGTCAAATTCCTGCACAATTGGGCCTTCTTCAACGACTCAAGACATTTTCAGTAGCTAAGAATCTTTT GACGGGACCAGTTCCGAACTTTCCCAGTGGCAAAGTTGACGTAAGCTATGGAAATAATCAAGGCCTGTGTGGAGGTTCAT TGGGGAGTTGCCAGGACAGTGGTTCCTCCAAGAGTAACACTGCAGTTATAGCTGGAGCAGCTGTTGGTGGGGTGACTCTT GCAGCATTAGGATTGGGTGTTGCAATGTTCTTCTACGTGCGCCGTGTTTCGTACAGGAAGAAGGAAGTGGACCCTGAAGG CAACAGATGGGCAAGAAGTCTAAAAGGAACTAAAGCAATTAAGGTTTCTATGTTTGAGGGATCAATTTCAAAAATGAAAT TGAGTGATCTCATGAAGGCTACTAACAGCTTCAGCAACAACAATATCATTGGGTCAGGAAGAACAGGAACTTTTTACAAA GCTTCTCTTGTTGATGGCCCAACACTCATGGTTAAGAGATTGCAGGAATCTCAGCACTCTGAGAAAGAATTTATGTCTGA GATGCAAACATTGGGGACTATCAAACATCGTAACCTGGTTCCTCTTTTAGGTTTTTGCATGGCCAAAAAGGAGAGGCTGT TGGTCTATAAAAACATGCCGAATGGCAACCTCCATGATCAACTACATCCCGCTGCTGGTGAGTGCACCCTTGATTGGCCT TTGAGACTGAAAATTGCAATTGGAGCAGCCAAAGGATTAGCGTGGCTTCACCATAGCTGCAATCCCCGTATTATCCACCG AAACATAAGCACCAAGTGCATCTTGTTGGATGCAGATTTTGAGCCCAAAATTTCTGATTTTGGCCTTGCCAGATTGATGA ACCCAGTCGATACTCATTTGAGTACTTTTGTCAACGGTGAGTTTGGGGATTTAGGTTATGTTGCTCCCGAGTATGCAAAA ACTCTGGTAGCGACACCTAAGGGGGATGTTTTTAGCTTTGGAACCATACTTCTTGAGTTGGTAACGGGTGAAAGACCTAC AACTGTGTCTAAAGCTCCAGAAACTTTTAAAGGAAATCTCGTAGATTGGATTACAGAGCTCTCAAGCAACTCACAACTCC ATGATGCCATTGATGAATCACTAGTCGGCAAGGGTGTTGATAATGAGCTTTTCCAAGTTTTGAAGGTTTCATGCAACTGT GTTTTATCAATTCCAAAGGAGAGGCCCACCATGTTTGAAGTATATCAGCTTTTAAGAGCTATTGGGGGTGCATACAATTT CACAACTGAGGATGAGATATTGTTACCGGAAGATATTGGTGATACTGAAAACATGGTGGAACTTATTGTTGCTCGAGAAG GAAATAACTGA 

Protein sequence (LotjaGi3g1v0370100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVVLSSRIFSSHIFVNFMLLISIGTTYGTETDILCLRNIKNSLQDPNNYLQSSWNFNNNTEGFICRFNGVECWHPDENRV LNLKLSNMGLKGQFPRGIVNCSSLTGLDLSNNGLSGTIPVDINTLVPFVTAFDLSSNELSGNIPVNLANCTYLNTLKLDQ NRLTGQIPAQLGLLQRLKTFSVAKNLLTGPVPNFPSGKVDVSYGNNQGLCGGSLGSCQDSGSSKSNTAVIAGAAVGGVTL AALGLGVAMFFYVRRVSYRKKEVDPEGNRWARSLKGTKAIKVSMFEGSISKMKLSDLMKATNSFSNNNIIGSGRTGTFYK ASLVDGPTLMVKRLQESQHSEKEFMSEMQTLGTIKHRNLVPLLGFCMAKKERLLVYKNMPNGNLHDQLHPAAGECTLDWP LRLKIAIGAAKGLAWLHHSCNPRIIHRNISTKCILLDADFEPKISDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYAK TLVATPKGDVFSFGTILLELVTGERPTTVSKAPETFKGNLVDWITELSSNSQLHDAIDESLVGKGVDNELFQVLKVSCNC VLSIPKERPTMFEVYQLLRAIGGAYNFTTEDEILLPEDIGDTENMVELIVAREGNN 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 227 227 -
SignalP_EUK 1 28 28 -
PANTHER 18 599 582 2.1E-300
PANTHER 18 599 582 2.1E-300
Gene3D 26 93 68 3.3E-6
SUPERFAMILY 30 206 177 5.92E-27
Pfam 31 73 43 2.8E-6
Gene3D 94 226 133 1.8E-29
Phobius 228 253 26 -
TMHMM 229 251 23 -
Phobius 254 616 363 -
Gene3D 265 377 113 3.1E-34
SUPERFAMILY 282 578 297 8.34E-67
ProSiteProfiles 304 588 285 30.054
Pfam 307 577 271 1.3E-36
Gene3D 379 593 215 1.6E-54

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0370100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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