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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0370100 |
Transcript ID | LotjaGi3g1v0370100.4 |
Related isoforms 4 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Receptor-like kinase; TAIR: AT5G48380.1 BAK1-interacting receptor-like kinase 1; Swiss-Prot: sp|Q9ASS4|Y5838_ARATH Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380; TrEMBL-Plants: tr|A0A072TLE6|A0A072TLE6_MEDTR LRR receptor-like kinase; Found in the gene: LotjaGi3g1v0370100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:75737101..75739599) extracted from Lotus japonicus Gifu genome v1.2.
AAGATGGTTGTTCTAAGTAGCCGGATTTTCAGTTCTCATATTTTTGTTAACTTCATGCTGCTGATTAGTATCGGGACAAC CTATGGGACTGAAACTGACATCTTGTGCTTGAGAAACATAAAAAATTCCCTTCAAGACCCCAATAATTATTTGCAATCAT CTTGGAATTTCAACAACAATACTGAAGGGTTTATCTGTAGATTTAATGGGGTTGAATGTTGGCACCCTGATGAGAACAGG GTTTTGAACCTCAAACTGTCCAATATGGGACTCAAGGGCCAGTTTCCTCGTGGCATTGTAAATTGCTCAAGCTTAACAGG CTTAGATCTTTCGAATAATGGTCTTTCTGGAACCATTCCAGTAGATATAAACACTCTTGTACCATTTGTGACAGCTTTTG ATCTATCTTCAAATGAATTGTCTGGGAATATACCTGTCAATCTTGCAAATTGTACCTATCTTAATACCCTGAAACTCGAC CAGAATCGACTCACAGGTCAAATTCCTGCACAATTGGGCCTTCTTCAACGACTCAAGACATTTTCAGTAGCTAAGAATCT TTTGACGGGACCAGTTCCGAACTTTCCCAGTGGCAAAGTTGACGTAAGCTATGGAAATAATCAAGGCCTGTGTGGAGGTT CATTGGGGAGTTGCCAGGACAGTGGTTCCTCCAAGAGTAACACTGCAGTTATAGCTGGAGCAGCTGTTGGTGGGGTGACT CTTGCAGCATTAGGATTGGGTGTTGCAATGTTCTTCTACGTGCGCCGTGTTTCGTACAGGAAGAAGGAAGTGGACCCTGA AGGCAACAGATGGGCAAGAAGTCTAAAAGGAACTAAAGCAATTAAGGCAAGTTGTGCTGATGACTTATACTGCGCGTATA TGATTACTATTAGAGAGCTTTTCATTTTTCTTCTGAGATCCATTTGGTTTTTATACTTTTAGTAAAAACTAGTTTATTTG AAACATTTCCTTTTTTATACTTTCAACTAGAGGGCATGCCTTGGCGCAACAATAAGGTTGCTGCCTGGTGACTTTGCGGT CAGAAGTTCGAGCCGTGGAACCAGCCTCTTGCAAAAAATGCAAGGTACGGTTGGCTACATTAGATTCACAAGGTGGATCC AGCCCCTCCCTAGACCTTGCTCATATTAGGAGCTTTATAGCATTAGGTTTGCCCTAATTTTGTATTTTCTTACTTTCAAT TGAAGCATTTTCTTAATAACTATTATATTTGCTTGATATTGTTCTTTATAGTAATTGGGAGAACTTTTTGTGCATACTGC TACACCAAACACATTGAAGTAATATATTTTCTAAATGAAACTGAGATTGTATTCATTTTCAATGTCAAAGTTAGAAAATA TAGAATATACTTGCTGCAAAGTTATTTTGTGTAAAACTTTCAGATCTGTTGTAGTTCAAATGATTTTACATACTATTGAA CTCTTGTGAGAATATTATGCATGAGCCTAACAATACTGAATTGGACATCAGGTTTCTATGTTTGAGGGATCAATTTCAAA AATGAAATTGAGTGATCTCATGAAGGCTACTAACAGCTTCAGCAACAACAATATCATTGGGTCAGGAAGAACAGGAACTT TTTACAAAGCTTCTCTTGTTGATGGCCCAACACTCATGGTTAAGAGATTGCAGGAATCTCAGCACTCTGAGAAAGAATTT ATGTCTGAGATGCAAACATTGGGGACTATCAAACATCGTAACCTGGTTCCTCTTTTAGGTTTTTGCATGGCCAAAAAGGA GAGGCTGTTGGTCTATAAAAACATGCCGAATGGCAACCTCCATGATCAACTACATCCCGCTGCTGGTGAGTGCACCCTTG ATTGGCCTTTGAGACTGAAAATTGCAATTGGAGCAGCCAAAGGATTAGCGTGGCTTCACCATAGCTGCAATCCCCGTATT ATCCACCGAAACATAAGCACCAAGTGCATCTTGTTGGATGCAGATTTTGAGCCCAAAATTTCTGATTTTGGCCTTGCCAG ATTGATGAACCCAGTCGATACTCATTTGAGTACTTTTGTCAACGGTGAGTTTGGGGATTTAGGTTATGTTGCTCCCGAGT ATGCAAAAACTCTGGTAGCGACACCTAAGGGGGATGTTTTTAGCTTTGGAACCATACTTCTTGAGTTGGTAACGGGTGAA AGACCTACAACTGTGTCTAAAGCTCCAGAAACTTTTAAAGGAAATCTCGTAGATTGGATTACAGAGCTCTCAAGCAACTC ACAACTCCATGATGCCATTGATGAATCACTAGTCGGCAAGGGTGTTGATAATGAGCTTTTCCAAGTTTTGAAGGTTTCAT GCAACTGTGTTTTATCAATTCCAAAGGAGAGGCCCACCATGTTTGAAGTATATCAGCTTTTAAGAGCTATTGGGGGTGCA TACAATTTCACAACTGAGGATGAGATATTGTTACCGGAAGATATTGGTGATACTGAAAACATGGTGGAACTTATTGTTGC TCGAGAAGGAAATAACTGA
CDS sequence (LotjaGi3g1v0370100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGTTCTAAGTAGCCGGATTTTCAGTTCTCATATTTTTGTTAACTTCATGCTGCTGATTAGTATCGGGACAACCTA TGGGACTGAAACTGACATCTTGTGCTTGAGAAACATAAAAAATTCCCTTCAAGACCCCAATAATTATTTGCAATCATCTT GGAATTTCAACAACAATACTGAAGGGTTTATCTGTAGATTTAATGGGGTTGAATGTTGGCACCCTGATGAGAACAGGGTT TTGAACCTCAAACTGTCCAATATGGGACTCAAGGGCCAGTTTCCTCGTGGCATTGTAAATTGCTCAAGCTTAACAGGCTT AGATCTTTCGAATAATGGTCTTTCTGGAACCATTCCAGTAGATATAAACACTCTTGTACCATTTGTGACAGCTTTTGATC TATCTTCAAATGAATTGTCTGGGAATATACCTGTCAATCTTGCAAATTGTACCTATCTTAATACCCTGAAACTCGACCAG AATCGACTCACAGGTCAAATTCCTGCACAATTGGGCCTTCTTCAACGACTCAAGACATTTTCAGTAGCTAAGAATCTTTT GACGGGACCAGTTCCGAACTTTCCCAGTGGCAAAGTTGACGTAAGCTATGGAAATAATCAAGGCCTGTGTGGAGGTTCAT TGGGGAGTTGCCAGGACAGTGGTTCCTCCAAGAGTAACACTGCAGTTATAGCTGGAGCAGCTGTTGGTGGGGTGACTCTT GCAGCATTAGGATTGGGTGTTGCAATGTTCTTCTACGTGCGCCGTGTTTCGTACAGGAAGAAGGAAGTGGACCCTGAAGG CAACAGATGGGCAAGAAGTCTAAAAGGAACTAAAGCAATTAAGGTTTCTATGTTTGAGGGATCAATTTCAAAAATGAAAT TGAGTGATCTCATGAAGGCTACTAACAGCTTCAGCAACAACAATATCATTGGGTCAGGAAGAACAGGAACTTTTTACAAA GCTTCTCTTGTTGATGGCCCAACACTCATGGTTAAGAGATTGCAGGAATCTCAGCACTCTGAGAAAGAATTTATGTCTGA GATGCAAACATTGGGGACTATCAAACATCGTAACCTGGTTCCTCTTTTAGGTTTTTGCATGGCCAAAAAGGAGAGGCTGT TGGTCTATAAAAACATGCCGAATGGCAACCTCCATGATCAACTACATCCCGCTGCTGGTGAGTGCACCCTTGATTGGCCT TTGAGACTGAAAATTGCAATTGGAGCAGCCAAAGGATTAGCGTGGCTTCACCATAGCTGCAATCCCCGTATTATCCACCG AAACATAAGCACCAAGTGCATCTTGTTGGATGCAGATTTTGAGCCCAAAATTTCTGATTTTGGCCTTGCCAGATTGATGA ACCCAGTCGATACTCATTTGAGTACTTTTGTCAACGGTGAGTTTGGGGATTTAGGTTATGTTGCTCCCGAGTATGCAAAA ACTCTGGTAGCGACACCTAAGGGGGATGTTTTTAGCTTTGGAACCATACTTCTTGAGTTGGTAACGGGTGAAAGACCTAC AACTGTGTCTAAAGCTCCAGAAACTTTTAAAGGAAATCTCGTAGATTGGATTACAGAGCTCTCAAGCAACTCACAACTCC ATGATGCCATTGATGAATCACTAGTCGGCAAGGGTGTTGATAATGAGCTTTTCCAAGTTTTGAAGGTTTCATGCAACTGT GTTTTATCAATTCCAAAGGAGAGGCCCACCATGTTTGAAGTATATCAGCTTTTAAGAGCTATTGGGGGTGCATACAATTT CACAACTGAGGATGAGATATTGTTACCGGAAGATATTGGTGATACTGAAAACATGGTGGAACTTATTGTTGCTCGAGAAG GAAATAACTGA
Protein sequence (LotjaGi3g1v0370100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVVLSSRIFSSHIFVNFMLLISIGTTYGTETDILCLRNIKNSLQDPNNYLQSSWNFNNNTEGFICRFNGVECWHPDENRV LNLKLSNMGLKGQFPRGIVNCSSLTGLDLSNNGLSGTIPVDINTLVPFVTAFDLSSNELSGNIPVNLANCTYLNTLKLDQ NRLTGQIPAQLGLLQRLKTFSVAKNLLTGPVPNFPSGKVDVSYGNNQGLCGGSLGSCQDSGSSKSNTAVIAGAAVGGVTL AALGLGVAMFFYVRRVSYRKKEVDPEGNRWARSLKGTKAIKVSMFEGSISKMKLSDLMKATNSFSNNNIIGSGRTGTFYK ASLVDGPTLMVKRLQESQHSEKEFMSEMQTLGTIKHRNLVPLLGFCMAKKERLLVYKNMPNGNLHDQLHPAAGECTLDWP LRLKIAIGAAKGLAWLHHSCNPRIIHRNISTKCILLDADFEPKISDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYAK TLVATPKGDVFSFGTILLELVTGERPTTVSKAPETFKGNLVDWITELSSNSQLHDAIDESLVGKGVDNELFQVLKVSCNC VLSIPKERPTMFEVYQLLRAIGGAYNFTTEDEILLPEDIGDTENMVELIVAREGNN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 227 | 227 | - | – | |
SignalP_EUK | 1 | 28 | 28 | - | – | |
PANTHER | 18 | 599 | 582 | 2.1E-300 | – | |
PANTHER | 18 | 599 | 582 | 2.1E-300 | – | |
Gene3D | 26 | 93 | 68 | 3.3E-6 | ||
SUPERFAMILY | 30 | 206 | 177 | 5.92E-27 | – | |
Pfam | 31 | 73 | 43 | 2.8E-6 | ||
Gene3D | 94 | 226 | 133 | 1.8E-29 | ||
Phobius | 228 | 253 | 26 | - | – | |
TMHMM | 229 | 251 | 23 | - | – | |
Phobius | 254 | 616 | 363 | - | – | |
Gene3D | 265 | 377 | 113 | 3.1E-34 | – | |
SUPERFAMILY | 282 | 578 | 297 | 8.34E-67 | ||
ProSiteProfiles | 304 | 588 | 285 | 30.054 | ||
Pfam | 307 | 577 | 271 | 1.3E-36 | ||
Gene3D | 379 | 593 | 215 | 1.6E-54 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0370100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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