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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0376900 |
| Transcript ID | LotjaGi3g1v0376900.1 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Homeobox leucine zipper protein; TAIR: AT4G00730.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein; Swiss-Prot: sp|Q0WV12|ANL2_ARATH Homeobox-leucine zipper protein ANTHOCYANINLESS 2; TrEMBL-Plants: tr|V7ANR5|V7ANR5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0376900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:76954313..76960602) extracted from Lotus japonicus Gifu genome v1.2.
ATCAGATCTCTGAGAAAGAGCCCCATCCCATGGATCTAATCTGACCTCGAAGCATTCTTTTATTTTAACTTGGTTTACTT TCATCCCCCACAAAAAGTTATCAAAAAGGCACACTGCAATTTTCACCTTCACTCACAGGCTTTGTAGGGATACAGAGAAA AAAACACATAAAAACAGTGAACAGATCAATCACATTGCTAAGAGTCAACCAACCCTTTTTGGAAGTATCTCTTTGTAAGG CTTCAAAGAGTCCACATGTTTGCATTTTATCTTCAACTTTTTCTTCATTTTCTCTCCCTCCCTTCACCTCTCTCTCACCT TTCTGTGTCCCAAAATCAATTTTCTACTATATCCTAATACCCCCTTTTCAGTTTTCTCTATCATATCATATATATACAGT ATTTTATTTTTCCATTGAATCTTTACAATAGTCAAGCATGCAGAAAACGGACCACACTAGGGTTCCTATATCCTATCCCA TTTAACCCAAAGCCACCACTTGAACTTCTGTCTAAAAACCACATAGTGTTACTGTCAAAGGGTCATCATCAGTGAGAGAA GGATAGAGAACGAAGAGCAAAGCTGTTACATACAGTACAGAGGGTTTTCTTAAGCTTGCCTTCTTTCTCTTTCTTTCTCT CCAAATAGCAGAAAAAAAGAAGAAGAAAAAGATAGCATTTTTTTCATAGTCAGAGAGATTTGAGACATTAGGGACTTACC CTTTTGTCTCCTCTATCTCTGTCTCTATTATTTTTTGAAGTACTATTAGATTTGAAAAATTCTGTTTTTGTGAATTTACA CTCAAAATTTCATGGATGAAGCAAATCGGTGAATCAGTGGAGTGAAAAGGCTTTCTGGGTGGTTTTATCAAAGAGAAAAG GTGGCTTCTTTGATGAGTTTTGGAGGTTTTCTTGACAGCAACAACTCCGGTGGTGGCGGTGGCGGTGGTAGAAACATAGC AGCTGATGTTCCTTACAGCAACGGCAACACCACCAACGATAGAATGGCCTTTGGTGCAATCTCTCAGCCACGCCTGGTGA CTACTACTCCCTCTTTGGCAAAACCCATGTTCACCTCTCCTGGATTGTCTCTGGCACTTGTGAGAGATCTTGTTAGCTTT CTTAGTTCCCCTTTGCATTTCTTGCTGGTAGTTACCTTGTTCTTGTTATGTTTCCTGATTTGTTTTCCTTTTTGTTTTCT GTGTTTGGAAAATAAATTCAAAAGCAGCAAAGCAATATAGATGGACAAGAAGATGTGAATAGAATGTGTGAGCCAAATGG TTTGAAGAGGAGCAGGGAAGAAGAGCAAAGCAGATCTGGCAGTGATAACATGGATGGTGGTGCTTCCTGTGATGAACAAG ATGCTGCCGACAATCCTCCTAATAAGAAGAAGCGTTATCACCGACACACTCCTCAGCAGATTCAAGAGCTTGAAGCGTAT GCTATTTTGGTCCACCGTGTGTTTGTTTTTAAGGTTTATTTACTTAGATTCTGAATGATGATTGTTTTTTTTTTTTTGGT AAATGGGTTTTAGGTTGTTCAAGGAGTGTCCTCACCCAGATGAGAAGCAAAGATTAGAACTCAGCAGAAGGCTTTGTTTG GAAACTAGGCAGGTCAAGTTCTGGTTCCAAAATCGGAGGACCCAAATGAAGGTACATTTTCTCACATGGCTTCTTTTAAT GGACCATCATGAAACTTTTATTACTTTTGTTAATAGATTTATTTGGTTGTACAATTGTACCAGACTCAATTGGAACGCCA TGAGAACACGCTGCTTAGGCAAGAGAATGATAAGCTGAGAGGTGAGAACATGTCTATTAGGGACGCTATGAGGAACCCAA TTTGTTCAAACTGTGGGGGTCCAGCTATGATTGGTGAGATTTCAATTGAGGAGCAGCATCTTCGGATCGAGAATGCCCGA TTGAAGGATGAGCTAGACCGGGTTTGCGCGCTCGCGGGGAAGTTCTTGGGTCGCCCCATTTCGTCATTGCCGAACTCAAG TTTGGAGCTTGGTGTTGGGGGAAACAATGGTTTTGGTGGGATGAACACAATGCCTGATTTTGGGATGGCTAACTCTTTAG CCATGGTGTCTCCTTCAATAAGACCATCACCGACTGGGGTTACTTCTGGATTTGTTGATAGATCAATTGAGAGGTCTATG ATTGTTGAGCTTGCTTTGGCTGCTATGGATGAATTGATGAAGATGGCGCAGACCGGTGAGCCTCTCTGGATGAGGAATGT TGAAGTGGGGAGGGAAATTTTGAACCATGAGGAGTACATGAGGACATTCACTCCTTGCATTGGGATTAGGCCTAATGGTT TTGTCTCTGAGGCTTCTAGGGAGACTGGAATGGTCATCATAAACAGCTTAGCCCTTGTTGAAACTCTCATGGATGCAGTA AGTTATATTAAACTAGTAATTGGGTAAAATTTGTGTTTGAATTGTTTTCATTCTATGTGGAAATGTGTACAACATCAAAT TGATTTGCTTTTTCGCCTTCGCAGAATCGATGGGCAGAGATGTTTCCTTGCATGATTGCCAGAACCGCCACCAACGAAGT TGTATCCAGTGGGATAAATGGAACCAGAAATGGTGCACTTCAACTAGTAAGTTCAATTTGTTGTATGGAACACTGTTATT AATTTTAGTAAAGCTTTTCTTTAATTTGTTAACCCATCAATTATGTGCACAGATGCATGGTGAACTTCATGTTCTTTCAC CTTTGGTTCCGGTTCGCGAGGTCAATTTCCTCCGATTTTGCAAGCAGCACAGAGAAGGTGTGTGGGCTGTGGTGGATCTG TCCATAGATACCATCCGAGAAGGTTCGGGCGTGCCTAGTTTTGGTAACTGCAGGAGGCTTCCTTCTGGTTGTGTGGTGCA AGATATGCCTAATGGTTATTCCAAGGTAAAATTTCCAAATGTTCTTTCTGCTTGTTATAACAATTGGATCAGCTTATTTT TGCTTGGAAGCTACACAATTGTTTTTGTTTTAGAATCAATTGTAGGAGAGTTTCTAAACATAATTTAGAGGACAGTAAAA ATGATTTACAGTCATCCACGCTTTGTGTCCTAAACATTTTATAGACACACACAAGGGTTGTACTAATCACCATGCAACTA TTTTATGAACCTTACTAAAGTACAGTGTTTAATGGAGCCTGTTTAATCTCTCTTGATTTCATGTTTTTATTTTTAAAAAA TTATTATAATTACCTTCAAGTAACTGGATCATGAGAGCTGGTAGAATATTCAAGTGAAGCAAACACCAGGCCAAGGAATC ACGGGGCTTTTGCTTTTCCAAGCCATTAAAAATCTCCTAGTTCCAAGCAACTTAACTAGCCTAGTGACTACTCACTCTAG AACTACTCTGTCAGTGATAATTCCCATATTCCTCTTTTCAATAAATTTGGACAATTGCATTGCAACTGAGCAGTGTGCTT CTTCTTGTCTCAATCAAAGCATTAATATAATTCTACACTGAGCTTCTCAACAATTCATCTAAAATCCAACAAACTAGTAT ATTTGAATAATACCCCTCATCATGTGGTCCAGGTCCAGAAAATTTTCATTAATTTAATCATAGAAGCCTCTGTCACTTGA TATTCTGCACCACATTAACTAGATAGTAGATATCCTTTCCTAAACAATTTATCTTGTAATCTTCCAAGTACTTTTTGATT CTATAAACAACATATATGATGTTTCTATTCCAATCAGACAATTCCCCAGAAGCATTATTTAATTCCAATATAACAATAAT AATAGCATAGTTTTGAAATCCAAACCCTTGGGGTTGAAAATCAAAGAGTGGCTATTTTGTCTGTTTCTAGTGAGTACTGT ATTAGTTTTGAGTTTAGTTACATTGGCAAATCTCGATGCTCATAGTGTCACTACCCCCTTACTTGACTTTTTATGTTGTA CCAATATTTTATCTACTTGGTAGAGATTCATTAGATACCTTTGTCTCAACCCCTTGTCCAATAATGGTATTTTAATCAAA TTATATATTAATTAATAAACTCTTAAACTTTGTGTGCAATCTAACGACCCTTTAATTTTGCGTTTCATTTAATTTACAGG TGACATGGGTGGAGCATGCAGAATACGACGAAAGTCAAGTCCACCAGCTGTACAGACCCTTATTGAGCTCCGGCATGGGG TTTGGAGCACAACGCTGGATCGCCACCTTACAACGCCAGTGCGAGTGCCTCGCCATCCTCATGTCCTCTGCACCACCCTC CATCAGAGACCACTCCGGTAACATTATCTTATATTTTTAATTTAATGAAGGTTGGATATAATAATGAAATTATTTAAGAA TTTTTTTCTAAAGTTATTAATTGTGGTGGTGGTGGATCCGGAACAGCACCGATTACAGCAGGGGGAAAGCGCAGCATGCT GAAGCTGGCGCAGCGCATGACCAACAACTTCTGCGCCGGGGTGTGCGCCTCCACCGTGCACAAATGGAACAAGCTGAATC CGGGCAATGTGGAGGAAAACGTGAGGGTGATGACACGGCAGAGCATCGACGATCCCGGTGAGCCACCGGGGATCGTGCTC AGCGCTGCCACGTCTGTGTGGCTCCCTGTCTCCCCTCACCGGCTCTTCAATTTCCTCCGTGACGAGAGGCTCCGGAGTGA GTGGGACATACTCTCCAACGGTGGTCCCATGCAGGAGATGGCCCACATCGCTAAGGGTCAAGACCATGGCAACTGCGTCT CTCTTCTACGAGCTAGTGTAAGATTGTTTTCTTTTATCAAATGACCATAATGCCCTTTTCCATGTCAATGAGCTTTCTTT GTCGTTTATTGTTTGGATTGGAGAGGTTGAAAATATGAAAAGGACAAAGGAGGAAATTTTTTAGAGGCGCTAATTTTGAT GAAGCGGTAAAATAAGAAGATTTTATAACAAGTCAAAATAAAAGGACATGGTACTTTCTGACATCATTGTCTTTTTATTT ATTTTTATTTTTTGAAAATTAAAAATATAATATAGGAAAAAGTTGAATCAGGGTTTGACTAAAACGAAATGACAGGGTTT CTTACATCATTATTTTATTTCATTTTTATTTTTGGAAATCAATATAACTTCATGAAAATGACAAGATGCTATTACTATAT TATACTGAAATAAAAATATTTTTGTATTAATTGATTTATAATTTATTTTTATTTTGCAGGCAATGAATTCGAACCAGAGT AGCATGTTGATACTACAGGAGACATGCACAGACGCGTCGGGGTCGCTTGTGGTGTACGCGCCGGTGGATACTCCGGCCAT GCACGTGGTCATGAATGGTGGCGATTCTGCTTATGTGGCGTTGTTGCCGTCTGGTTTTGCGGTTGCTCCTGATGGTGATG AGACGCGTGGGCTGGAGAATGGTGGTGGTGCTAATGGCGGTGATGATGGTGAGGCGCGTGCGGGTGGGTCCCTTCTGACG GTGGCGTTTCAGATACTCGTGAATAGTCTCCCTACGGCCAAGCTGACGGTGGAGTCAGTGGAGACCGTGAACAATCTCAT CTCCTGCACGGTTCAGAAGATCAGAGCCGCGCTTTCACTGTGAAAATTGTCTGTCACGTGATCATCACCTCTGAGTCACG TGAACCCTGTGTTTTTTTTGTATTTTTTGTTGTAGAGGAGTGATTGAAAGTTGAAAGTTGAAACTCTGTAACAGGTGGCG CGTGTGGAAAACGCGTGGGTGTGGGTTTTGAAGATGTGGGGTTGGGTTGGGTTGTTTGAGTCAAGAACGAACCACTCATA GGAAAAAAAACACCTTGCATGATGGTAACTAAGGATCCGAAAGTGACAGGTCAGGTCAGGTTACTGAACGCAAGGTAAGG GTTGTGGTTCGGGTATTGACTCGGGTTTACCTCATGCTTACTCCTCTAGCTGAAAACCAAGAAATTACTGTAATGAAAAA ACAGCATAGAAAAATGGAAAAGATTGTGTTAGTATTTGATCAAAATCAAAATGTTATTTTAAGTTGCATTTTCCCAATTT GTTTTTTCTGTAATGAAAAAAAAATCTGATTTTCTAGGCGGTGCTTGGTTTGGTGGGTCCAGAGTGAGGGTAAGGTTTGA TTTGGTGGTGTGTAAGTATTAAGTAAGCATGCATGCATTGCATTTAAATGATGGTGCAGAAGCTGTTGGGAGAAGAGTTA TCATCATTTAATGCTGGGGCGTCTGGTATGTCTTCCTTTGCGTGAGGTAGGCCAATTAGGTTCTGACAATAGGAGCATTA TCTGACAACAAAGGAGGGTGGGATTGAGTGTGTGATAATGCCCTTTTGGC
CDS sequence (LotjaGi3g1v0376900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTTTTGGAGGTTTTCTTGACAGCAACAACTCCGGTGGTGGCGGTGGCGGTGGTAGAAACATAGCAGCTGATGTTCC TTACAGCAACGGCAACACCACCAACGATAGAATGGCCTTTGGTGCAATCTCTCAGCCACGCCTGGTGACTACTACTCCCT CTTTGGCAAAACCCATGTTCACCTCTCCTGGATTGTCTCTGGCACTTGTGAGAGATCTTCAGCAAAGCAATATAGATGGA CAAGAAGATGTGAATAGAATGTGTGAGCCAAATGGTTTGAAGAGGAGCAGGGAAGAAGAGCAAAGCAGATCTGGCAGTGA TAACATGGATGGTGGTGCTTCCTGTGATGAACAAGATGCTGCCGACAATCCTCCTAATAAGAAGAAGCGTTATCACCGAC ACACTCCTCAGCAGATTCAAGAGCTTGAAGCGTTGTTCAAGGAGTGTCCTCACCCAGATGAGAAGCAAAGATTAGAACTC AGCAGAAGGCTTTGTTTGGAAACTAGGCAGGTCAAGTTCTGGTTCCAAAATCGGAGGACCCAAATGAAGACTCAATTGGA ACGCCATGAGAACACGCTGCTTAGGCAAGAGAATGATAAGCTGAGAGGTGAGAACATGTCTATTAGGGACGCTATGAGGA ACCCAATTTGTTCAAACTGTGGGGGTCCAGCTATGATTGGTGAGATTTCAATTGAGGAGCAGCATCTTCGGATCGAGAAT GCCCGATTGAAGGATGAGCTAGACCGGGTTTGCGCGCTCGCGGGGAAGTTCTTGGGTCGCCCCATTTCGTCATTGCCGAA CTCAAGTTTGGAGCTTGGTGTTGGGGGAAACAATGGTTTTGGTGGGATGAACACAATGCCTGATTTTGGGATGGCTAACT CTTTAGCCATGGTGTCTCCTTCAATAAGACCATCACCGACTGGGGTTACTTCTGGATTTGTTGATAGATCAATTGAGAGG TCTATGATTGTTGAGCTTGCTTTGGCTGCTATGGATGAATTGATGAAGATGGCGCAGACCGGTGAGCCTCTCTGGATGAG GAATGTTGAAGTGGGGAGGGAAATTTTGAACCATGAGGAGTACATGAGGACATTCACTCCTTGCATTGGGATTAGGCCTA ATGGTTTTGTCTCTGAGGCTTCTAGGGAGACTGGAATGGTCATCATAAACAGCTTAGCCCTTGTTGAAACTCTCATGGAT GCAAATCGATGGGCAGAGATGTTTCCTTGCATGATTGCCAGAACCGCCACCAACGAAGTTGTATCCAGTGGGATAAATGG AACCAGAAATGGTGCACTTCAACTAATGCATGGTGAACTTCATGTTCTTTCACCTTTGGTTCCGGTTCGCGAGGTCAATT TCCTCCGATTTTGCAAGCAGCACAGAGAAGGTGTGTGGGCTGTGGTGGATCTGTCCATAGATACCATCCGAGAAGGTTCG GGCGTGCCTAGTTTTGGTAACTGCAGGAGGCTTCCTTCTGGTTGTGTGGTGCAAGATATGCCTAATGGTTATTCCAAGGT GACATGGGTGGAGCATGCAGAATACGACGAAAGTCAAGTCCACCAGCTGTACAGACCCTTATTGAGCTCCGGCATGGGGT TTGGAGCACAACGCTGGATCGCCACCTTACAACGCCAGTGCGAGTGCCTCGCCATCCTCATGTCCTCTGCACCACCCTCC ATCAGAGACCACTCCGCACCGATTACAGCAGGGGGAAAGCGCAGCATGCTGAAGCTGGCGCAGCGCATGACCAACAACTT CTGCGCCGGGGTGTGCGCCTCCACCGTGCACAAATGGAACAAGCTGAATCCGGGCAATGTGGAGGAAAACGTGAGGGTGA TGACACGGCAGAGCATCGACGATCCCGGTGAGCCACCGGGGATCGTGCTCAGCGCTGCCACGTCTGTGTGGCTCCCTGTC TCCCCTCACCGGCTCTTCAATTTCCTCCGTGACGAGAGGCTCCGGAGTGAGTGGGACATACTCTCCAACGGTGGTCCCAT GCAGGAGATGGCCCACATCGCTAAGGGTCAAGACCATGGCAACTGCGTCTCTCTTCTACGAGCTAGTGCAATGAATTCGA ACCAGAGTAGCATGTTGATACTACAGGAGACATGCACAGACGCGTCGGGGTCGCTTGTGGTGTACGCGCCGGTGGATACT CCGGCCATGCACGTGGTCATGAATGGTGGCGATTCTGCTTATGTGGCGTTGTTGCCGTCTGGTTTTGCGGTTGCTCCTGA TGGTGATGAGACGCGTGGGCTGGAGAATGGTGGTGGTGCTAATGGCGGTGATGATGGTGAGGCGCGTGCGGGTGGGTCCC TTCTGACGGTGGCGTTTCAGATACTCGTGAATAGTCTCCCTACGGCCAAGCTGACGGTGGAGTCAGTGGAGACCGTGAAC AATCTCATCTCCTGCACGGTTCAGAAGATCAGAGCCGCGCTTTCACTGTGA
Protein sequence (LotjaGi3g1v0376900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSFGGFLDSNNSGGGGGGGRNIAADVPYSNGNTTNDRMAFGAISQPRLVTTTPSLAKPMFTSPGLSLALVRDLQQSNIDG QEDVNRMCEPNGLKRSREEEQSRSGSDNMDGGASCDEQDAADNPPNKKKRYHRHTPQQIQELEALFKECPHPDEKQRLEL SRRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRGENMSIRDAMRNPICSNCGGPAMIGEISIEEQHLRIEN ARLKDELDRVCALAGKFLGRPISSLPNSSLELGVGGNNGFGGMNTMPDFGMANSLAMVSPSIRPSPTGVTSGFVDRSIER SMIVELALAAMDELMKMAQTGEPLWMRNVEVGREILNHEEYMRTFTPCIGIRPNGFVSEASRETGMVIINSLALVETLMD ANRWAEMFPCMIARTATNEVVSSGINGTRNGALQLMHGELHVLSPLVPVREVNFLRFCKQHREGVWAVVDLSIDTIREGS GVPSFGNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYRPLLSSGMGFGAQRWIATLQRQCECLAILMSSAPPS IRDHSAPITAGGKRSMLKLAQRMTNNFCAGVCASTVHKWNKLNPGNVEENVRVMTRQSIDDPGEPPGIVLSAATSVWLPV SPHRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNSNQSSMLILQETCTDASGSLVVYAPVDT PAMHVVMNGGDSAYVALLPSGFAVAPDGDETRGLENGGGANGGDDGEARAGGSLLTVAFQILVNSLPTAKLTVESVETVN NLISCTVQKIRAALSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 31 | 31 | - | – | |
| PANTHER | 69 | 815 | 747 | 0.0 | ||
| PANTHER | 69 | 815 | 747 | 0.0 | – | |
| MobiDBLite | 78 | 135 | 58 | - | – | |
| MobiDBLite | 88 | 105 | 18 | - | – | |
| Gene3D | 101 | 184 | 84 | 7.5E-20 | – | |
| SUPERFAMILY | 108 | 185 | 78 | 5.13E-21 | ||
| ProSiteProfiles | 125 | 185 | 61 | 17.362 | ||
| SMART | 126 | 189 | 64 | 4.7E-17 | ||
| Pfam | 128 | 183 | 56 | 1.7E-18 | ||
| CDD | 128 | 185 | 58 | 6.40555E-19 | ||
| ProSitePatterns | 160 | 183 | 24 | - | ||
| Coils | 179 | 199 | 21 | - | – | |
| ProSiteProfiles | 316 | 552 | 237 | 42.319 | ||
| SUPERFAMILY | 318 | 549 | 232 | 2.59E-31 | – | |
| CDD | 320 | 548 | 229 | 2.20654E-124 | – | |
| SMART | 325 | 549 | 225 | 1.7E-45 | ||
| Pfam | 325 | 549 | 225 | 2.1E-54 | ||
| SUPERFAMILY | 579 | 810 | 232 | 7.6E-23 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. | ||
| Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of LotjaGi3g1v0376900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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